RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MCM6Q14566 821 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 ABTB2Q8N961 1025 aa20.87■□□□□ 0.93
SMC4-201ENST00000344722 ALS2CR12Q96Q35 445 aa20.87■□□□□ 0.93
SMC4-201ENST00000344722 NLRP2Q9NX02 1062 aa20.87■□□□□ 0.93
SMC4-201ENST00000344722 ZNF500O60304 480 aaPredicted RBP20.87■□□□□ 0.93
SMC4-201ENST00000344722 IFFO1Q0D2I5 559 aa20.87■□□□□ 0.93
SMC4-201ENST00000344722 ANKRD44Q8N8A2 993 aa20.87■□□□□ 0.93
SMC4-201ENST00000344722 FAM177BA6PVY3 158 aa20.87■□□□□ 0.93
SMC4-201ENST00000344722 PPP1R9BQ96SB3 815 aa20.86■□□□□ 0.93
SMC4-201ENST00000344722 CEP126Q9P2H0 1117 aa20.86■□□□□ 0.93
SMC4-201ENST00000344722 U2AF2P26368 475 aaKnown RBP eCLIP20.86■□□□□ 0.936e-7■■■■■ 34.1
SMC4-201ENST00000344722 BMP2KQ9NSY1 1161 aaPredicted RBP20.86■□□□□ 0.93
SMC4-201ENST00000344722 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
SMC4-201ENST00000344722 RLBP1P12271 317 aa20.86■□□□□ 0.93
SMC4-201ENST00000344722 ZNF530Q6P9A1 599 aaPredicted RBP20.86■□□□□ 0.93
SMC4-201ENST00000344722 HSF2BPO75031 334 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 SYT1P21579 422 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 KANK3Q6NY19 840 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 NBPF11Q86T75 865 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 MICALL1Q8N3F8 863 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 MBIPQ9NS73 344 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 CCDC175P0C221 793 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 KIF6Q6ZMV9 814 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 CCDC102BQ68D86 513 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 C10orf67Q8IYJ2 551 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 AOPEPQ8N6M6 819 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 SLC52A1Q9NWF4 448 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
SMC4-201ENST00000344722 LIG1P18858 919 aa20.84■□□□□ 0.93
SMC4-201ENST00000344722 USP26Q9BXU7 913 aa20.84■□□□□ 0.93
SMC4-201ENST00000344722 NEK1Q96PY6 1258 aa20.84■□□□□ 0.93
SMC4-201ENST00000344722 A0A1B0GUL7 405 aa20.84■□□□□ 0.93
SMC4-201ENST00000344722 SMC1AQ14683 1233 aaKnown RBP20.84■□□□□ 0.93
SMC4-201ENST00000344722 GCOM1H8Y6P7 765 aaPredicted RBP20.83■□□□□ 0.93
SMC4-201ENST00000344722 MYZAPP0CAP1 466 aa20.83■□□□□ 0.93
SMC4-201ENST00000344722 GIGYF2Q6Y7W6 1299 aaKnown RBP20.83■□□□□ 0.93
SMC4-201ENST00000344722 TOPBP1Q92547 1522 aa20.83■□□□□ 0.93
SMC4-201ENST00000344722 TUBBP07437 444 aa20.83■□□□□ 0.93
SMC4-201ENST00000344722 GBP2P32456 591 aaPredicted RBP20.83■□□□□ 0.93
SMC4-201ENST00000344722 CCT2P78371 535 aaKnown RBP20.83■□□□□ 0.93
SMC4-201ENST00000344722 CCDC196A0A1B0GTZ2 297 aa20.83■□□□□ 0.92
SMC4-201ENST00000344722 MRPS27Q92552 414 aaKnown RBP20.83■□□□□ 0.92
SMC4-201ENST00000344722 GNL3LQ9NVN8 582 aaKnown RBP20.83■□□□□ 0.92
SMC4-201ENST00000344722 VPS18Q9P253 973 aa20.83■□□□□ 0.92
SMC4-201ENST00000344722 PIK3C2GO75747 1445 aa20.83■□□□□ 0.92
SMC4-201ENST00000344722 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.92
SMC4-201ENST00000344722 ZBTB40Q9NUA8 1239 aa20.83■□□□□ 0.92
SMC4-201ENST00000344722 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.92
SMC4-201ENST00000344722 SOGA3Q5TF21 947 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 TSHZ3Q63HK5 1081 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 BCCIPQ9P287 314 aaKnown RBP eCLIP20.82■□□□□ 0.92
SMC4-201ENST00000344722 CUL7Q14999 1698 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 PTPRKQ15262 1439 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 HSPA4P34932 840 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 PIP4K2BP78356 416 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 NPHP3Q7Z494 1330 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 OPA1O60313 960 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 TDO2P48775 406 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 SYT10Q6XYQ8 523 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 KCNG4Q8TDN1 519 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 CTDP1Q9Y5B0 961 aaPredicted RBP20.82■□□□□ 0.92
SMC4-201ENST00000344722 EBAG9O00559 213 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 NECAB1Q8N987 351 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 FLIIQ13045 1269 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 SPECC1LQ69YQ0 1117 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 KRBA2Q6ZNG9 492 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 CACNA2D4Q7Z3S7 1137 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 CCDC91Q7Z6B0 441 aa20.82■□□□□ 0.92
SMC4-201ENST00000344722 FAM135AQ9P2D6 1515 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 GOLGA8BA8MQT2 603 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 GTF3C6Q969F1 213 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 INSRP06213 1382 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 MRPL50Q8N5N7 158 aaKnown RBP20.81■□□□□ 0.92
SMC4-201ENST00000344722 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.81■□□□□ 0.922e-10■■■□□ 18.8
SMC4-201ENST00000344722 CCDC178Q5BJE1 867 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 TXNDC2Q86VQ3 553 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 CCDC113Q9H0I3 377 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 ANKRD62A6NC57 917 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 MYL6BP14649 208 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 CTAGE1Q96RT6 745 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 CCDC8Q9H0W5 538 aaPredicted RBP20.81■□□□□ 0.92
SMC4-201ENST00000344722 TNNQ9UQP3 1299 aa20.81■□□□□ 0.92
SMC4-201ENST00000344722 FGFR1OPO95684 399 aaKnown RBP20.8■□□□□ 0.92
SMC4-201ENST00000344722 EZRP15311 586 aaKnown RBP20.8■□□□□ 0.92
SMC4-201ENST00000344722 DCTPP1Q9H773 170 aa20.8■□□□□ 0.92
SMC4-201ENST00000344722 MAATS1Q7Z4T9 603 aa20.8■□□□□ 0.92
SMC4-201ENST00000344722 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMC4-201ENST00000344722 JADE2Q9NQC1 790 aa20.8■□□□□ 0.92
SMC4-201ENST00000344722 ANKRD36BQ8N2N9 1353 aa20.8■□□□□ 0.92
SMC4-201ENST00000344722 SYKP43405 635 aa20.8■□□□□ 0.92
SMC4-201ENST00000344722 ZHX3Q9H4I2 956 aa20.79■□□□□ 0.92
SMC4-201ENST00000344722 CTAGE9A4FU28 777 aa20.79■□□□□ 0.92
SMC4-201ENST00000344722 HLTFQ14527 1009 aaKnown RBP eCLIP20.79■□□□□ 0.925e-35■■■■■ 127.1
SMC4-201ENST00000344722 TAF7Q15545 349 aaPredicted RBP20.79■□□□□ 0.92
SMC4-201ENST00000344722 NUP160Q12769 1436 aa20.79■□□□□ 0.92
SMC4-201ENST00000344722 SSRP1Q08945 709 aaKnown RBP20.79■□□□□ 0.92
SMC4-201ENST00000344722 ISM2Q6H9L7 571 aa20.78■□□□□ 0.92
SMC4-201ENST00000344722 HDXQ7Z353 690 aa20.78■□□□□ 0.92
SMC4-201ENST00000344722 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
SMC4-201ENST00000344722 AIDAQ96BJ3 306 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms