RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 RFC4P35249 363 aa10.4□□□□□ -0.74
FOXM1-201ENST00000342628 NEXNQ0ZGT2 675 aa10.4□□□□□ -0.74
FOXM1-201ENST00000342628 KSR2Q6VAB6 950 aa10.4□□□□□ -0.74
FOXM1-201ENST00000342628 MSH5O43196 834 aa10.4□□□□□ -0.74
FOXM1-201ENST00000342628 ADRA2BP18089 450 aa10.4□□□□□ -0.74
FOXM1-201ENST00000342628 SLC4A10Q6U841 1118 aa10.4□□□□□ -0.74
FOXM1-201ENST00000342628 COL15A1P39059 1388 aa10.4□□□□□ -0.75
FOXM1-201ENST00000342628 PI4KAP2A4QPH2 592 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 DZIP1LQ8IYY4 767 aaKnown RBP10.39□□□□□ -0.75
FOXM1-201ENST00000342628 PI4KAP1Q8N8J0 262 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 PLBD2Q8NHP8 589 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 CLUAP1Q96AJ1 413 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 TBC1D2BQ9UPU7 963 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 SSFA2P28290 1259 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 TTLL7Q6ZT98 887 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 ZNF652Q9Y2D9 606 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 HSP90AB3PQ58FF7 597 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 DNAAF4Q8WXU2 420 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 ZBTB3Q9H5J0 574 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 MAP3K2Q9Y2U5 619 aa10.39□□□□□ -0.75
FOXM1-201ENST00000342628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.38□□□□□ -0.75
FOXM1-201ENST00000342628 TRIM27P14373 513 aa10.38□□□□□ -0.75
FOXM1-201ENST00000342628 PDE3AQ14432 1141 aa10.38□□□□□ -0.75
FOXM1-201ENST00000342628 MAP3K15Q6ZN16 1313 aa10.38□□□□□ -0.75
FOXM1-201ENST00000342628 SLC15A2Q16348 729 aa10.38□□□□□ -0.75
FOXM1-201ENST00000342628 ERVV-1B6SEH8 477 aa10.38□□□□□ -0.75
FOXM1-201ENST00000342628 LRP10Q7Z4F1 713 aa10.38□□□□□ -0.75
FOXM1-201ENST00000342628 AKT1S1Q96B36 256 aa10.38□□□□□ -0.75
FOXM1-201ENST00000342628 F6X3S4 739 aa10.37□□□□□ -0.75
FOXM1-201ENST00000342628 CCT4P50991 539 aaKnown RBP10.37□□□□□ -0.75
FOXM1-201ENST00000342628 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
FOXM1-201ENST00000342628 RREB1Q92766 1687 aa10.37□□□□□ -0.75
FOXM1-201ENST00000342628 CHMP4BQ9H444 224 aaKnown RBP10.37□□□□□ -0.75
FOXM1-201ENST00000342628 NARFQ9UHQ1 456 aa10.37□□□□□ -0.75
FOXM1-201ENST00000342628 ZNF827Q17R98 1081 aa10.37□□□□□ -0.75
FOXM1-201ENST00000342628 MYD88Q99836 296 aa10.37□□□□□ -0.75
FOXM1-201ENST00000342628 RNF123Q5XPI4 1314 aa10.36□□□□□ -0.75
FOXM1-201ENST00000342628 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
FOXM1-201ENST00000342628 METTL22Q9BUU2 404 aaPredicted RBP10.36□□□□□ -0.75
FOXM1-201ENST00000342628 SRCIN1Q9C0H9 1055 aa10.36□□□□□ -0.75
FOXM1-201ENST00000342628 GIGYF2Q6Y7W6 1299 aaKnown RBP10.36□□□□□ -0.75
FOXM1-201ENST00000342628 PANK1Q8TE04 598 aa10.36□□□□□ -0.75
FOXM1-201ENST00000342628 USPL1Q5W0Q7 1092 aa10.35□□□□□ -0.75
FOXM1-201ENST00000342628 CLEC4GQ6UXB4 293 aa10.35□□□□□ -0.75
FOXM1-201ENST00000342628 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
FOXM1-201ENST00000342628 TCIRG1Q13488 830 aa10.35□□□□□ -0.75
FOXM1-201ENST00000342628 ADCY9O60503 1353 aa10.35□□□□□ -0.75
FOXM1-201ENST00000342628 RGL2O15211 777 aa10.35□□□□□ -0.75
FOXM1-201ENST00000342628 SMIM5Q71RC9 77 aa10.35□□□□□ -0.75
FOXM1-201ENST00000342628 LINS1Q8NG48 757 aa10.35□□□□□ -0.75
FOXM1-201ENST00000342628 ABCC4O15439 1325 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 NUP188Q5SRE5 1749 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 ALDH1L1O75891 902 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 CAMTA2O94983 1202 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
FOXM1-201ENST00000342628 DDX19BQ9UMR2 479 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 COG6Q9Y2V7 657 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 IRX6P78412 446 aaPredicted RBP10.34□□□□□ -0.75
FOXM1-201ENST00000342628 SRP68Q9UHB9 627 aaKnown RBP10.34□□□□□ -0.75
FOXM1-201ENST00000342628 HDAC5Q9UQL6 1122 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 USP42Q9H9J4 1324 aaKnown RBP10.34□□□□□ -0.75
FOXM1-201ENST00000342628 ATP5J2-PTCD1G3V325 749 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 HLFQ16534 295 aa10.34□□□□□ -0.75
FOXM1-201ENST00000342628 INTS3Q68E01 1043 aaKnown RBP10.34□□□□□ -0.75
FOXM1-201ENST00000342628 RTN4Q9NQC3 1192 aaKnown RBP10.34□□□□□ -0.75
FOXM1-201ENST00000342628 C9orf78Q9NZ63 289 aaPredicted RBP10.34□□□□□ -0.75
FOXM1-201ENST00000342628 PXDNLA1KZ92 1463 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 NPHP1O15259 732 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 MVPQ14764 893 aaKnown RBP10.33□□□□□ -0.76
FOXM1-201ENST00000342628 COL23A1Q86Y22 540 aaPredicted RBP10.33□□□□□ -0.76
FOXM1-201ENST00000342628 CWC25Q9NXE8 425 aaPredicted RBP10.33□□□□□ -0.76
FOXM1-201ENST00000342628 NIP7Q9Y221 180 aaKnown RBP eCLIP10.33□□□□□ -0.76
FOXM1-201ENST00000342628 ARFGEF2Q9Y6D5 1785 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 GPTP24298 496 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 PARP10Q53GL7 1025 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 BEND3Q5T5X7 828 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 C20orf194Q5TEA3 1177 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 SETDB2Q96T68 719 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 NUP98P52948 1817 aa10.33□□□□□ -0.76
FOXM1-201ENST00000342628 BICDL1Q6ZP65 573 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 NLGN1Q8N2Q7 840 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 CCDC191Q8NCU4 936 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 PNPLA7Q6ZV29 1317 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 RLBP1P12271 317 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 AMIGO3Q86WK7 504 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 ATP10DQ9P241 1426 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 NEURL1BA8MQ27 555 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 GTF2E1P29083 439 aaPredicted RBP10.32□□□□□ -0.76
FOXM1-201ENST00000342628 CWF19L2Q2TBE0 894 aaKnown RBP10.32□□□□□ -0.76
FOXM1-201ENST00000342628 CRBNQ96SW2 442 aa10.32□□□□□ -0.76
FOXM1-201ENST00000342628 GNAI3P08754 354 aa10.31□□□□□ -0.76
FOXM1-201ENST00000342628 TRIM28Q13263 835 aaKnown RBP10.31□□□□□ -0.76
FOXM1-201ENST00000342628 SLC16A10Q8TF71 515 aa10.31□□□□□ -0.76
FOXM1-201ENST00000342628 ISCA1Q9BUE6 129 aa10.31□□□□□ -0.76
FOXM1-201ENST00000342628 FAM177BA6PVY3 158 aa10.31□□□□□ -0.76
FOXM1-201ENST00000342628 GYS1P13807 737 aa10.31□□□□□ -0.76
FOXM1-201ENST00000342628 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms