RNA–Protein interactions for RNA: ENST00000339251.9

MUC4-202, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-202ENST00000339251 CAMSAP1Q5T5Y3 1602 aa13.58□□□□□ -0.24
MUC4-202ENST00000339251 SCAND2PQ9GZW5 306 aaPredicted RBP13.58□□□□□ -0.24
MUC4-202ENST00000339251 ARHGAP31Q2M1Z3 1444 aa13.58□□□□□ -0.24
MUC4-202ENST00000339251 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.24
MUC4-202ENST00000339251 FSD1Q9BTV5 496 aa13.58□□□□□ -0.24
MUC4-202ENST00000339251 STAP2Q9UGK3 403 aa13.58□□□□□ -0.24
MUC4-202ENST00000339251 SMTNL1A8MU46 457 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 FEZ1Q99689 392 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.57□□□□□ -0.24
MUC4-202ENST00000339251 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 V9GYY5 206 aaPredicted RBP13.57□□□□□ -0.24
MUC4-202ENST00000339251 LMTK2Q8IWU2 1503 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 CPSF1Q10570 1443 aaKnown RBP13.57□□□□□ -0.24
MUC4-202ENST00000339251 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 DNAJC25Q9H1X3 360 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
MUC4-202ENST00000339251 PTPN14Q15678 1187 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 CEP135Q66GS9 1140 aa13.57□□□□□ -0.24
MUC4-202ENST00000339251 DDX19AQ9NUU7 478 aaKnown RBP13.57□□□□□ -0.24
MUC4-202ENST00000339251 PPLO60437 1756 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
MUC4-202ENST00000339251 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
MUC4-202ENST00000339251 CCDC73Q6ZRK6 1079 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 AACSQ86V21 672 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 MROH1Q8NDA8 1641 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 GNAT3A8MTJ3 354 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 LARGE1O95461 756 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 LIG1P18858 919 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 G3BP1Q13283 466 aaKnown RBP eCLIP13.56□□□□□ -0.24
MUC4-202ENST00000339251 CBX8Q9HC52 389 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 PAXBP1Q9Y5B6 917 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 ERICH4A6NGS2 130 aa13.56□□□□□ -0.24
MUC4-202ENST00000339251 ARHGEF40Q8TER5 1519 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 VPS53Q5VIR6 699 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 DDX11Q96FC9 970 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 KCNF1Q9H3M0 494 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 NRBP1Q9UHY1 535 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 IL25Q9H293 177 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
MUC4-202ENST00000339251 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
MUC4-202ENST00000339251 AOX1Q06278 1338 aa13.55□□□□□ -0.24
MUC4-202ENST00000339251 RPAP1Q9BWH6 1393 aaPredicted RBP13.55□□□□□ -0.24
MUC4-202ENST00000339251 CCDC66A2RUB6 948 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 TTC6Q86TZ1 520 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 LSG1Q9H089 658 aaKnown RBP13.54□□□□□ -0.24
MUC4-202ENST00000339251 ECHDC1Q9NTX5 307 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 RBM8AQ9Y5S9 174 aaKnown RBP13.54□□□□□ -0.24
MUC4-202ENST00000339251 ARHGEF28Q8N1W1 1705 aaKnown RBP13.54□□□□□ -0.24
MUC4-202ENST00000339251 AATKQ6ZMQ8 1374 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 CHMP4AQ9BY43 222 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 USP44Q9H0E7 712 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
MUC4-202ENST00000339251 KINO60870 393 aaKnown RBP13.54□□□□□ -0.24
MUC4-202ENST00000339251 ZNF75DP51815 510 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 TEFQ10587 303 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
MUC4-202ENST00000339251 HOMER1Q86YM7 354 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 ACEP12821 1306 aa13.54□□□□□ -0.24
MUC4-202ENST00000339251 PTPRMP28827 1452 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 NLRP6P59044 892 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 GORABQ5T7V8 394 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 TAF3Q5VWG9 929 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 ATP7BP35670 1465 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 RICTORQ6R327 1708 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 HIP1O00291 1037 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 EPB41L2O43491 1005 aaKnown RBP13.53□□□□□ -0.24
MUC4-202ENST00000339251 ANXA1P04083 346 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 PTH1RQ03431 593 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 ME3Q16798 604 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 SIL1Q9H173 461 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 MRVI1Q9Y6F6 885 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 NEXMIFQ5QGS0 1516 aa13.53□□□□□ -0.24
MUC4-202ENST00000339251 ZSCAN25Q6NSZ9 544 aa13.52□□□□□ -0.24
MUC4-202ENST00000339251 SDF4Q9BRK5 362 aa13.52□□□□□ -0.24
MUC4-202ENST00000339251 TPM4P67936 248 aa13.52□□□□□ -0.25
MUC4-202ENST00000339251 FMNL2Q96PY5 1086 aa13.52□□□□□ -0.25
MUC4-202ENST00000339251 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.25
MUC4-202ENST00000339251 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
MUC4-202ENST00000339251 PI4KAP2A4QPH2 592 aa13.52□□□□□ -0.25
MUC4-202ENST00000339251 PDIA4P13667 645 aaKnown RBP13.52□□□□□ -0.25
MUC4-202ENST00000339251 PI4KAP1Q8N8J0 262 aa13.52□□□□□ -0.25
MUC4-202ENST00000339251 DNAAF4Q8WXU2 420 aa13.52□□□□□ -0.25
MUC4-202ENST00000339251 BOLA2Q9H3K6 86 aa13.52□□□□□ -0.25
MUC4-202ENST00000339251 AP5Z1O43299 807 aa13.51□□□□□ -0.25
MUC4-202ENST00000339251 SKILP12757 684 aa13.51□□□□□ -0.25
MUC4-202ENST00000339251 CREB3L3Q68CJ9 461 aa13.51□□□□□ -0.25
MUC4-202ENST00000339251 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
MUC4-202ENST00000339251 KRT222Q8N1A0 295 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms