RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 FLIIQ13045 1269 aa18.01■□□□□ 0.47
APOBEC3B-202ENST00000335760 ZBTB3Q9H5J0 574 aa18.01■□□□□ 0.47
APOBEC3B-202ENST00000335760 MAP3K15Q6ZN16 1313 aa18.01■□□□□ 0.47
APOBEC3B-202ENST00000335760 BCORQ6W2J9 1755 aa18■□□□□ 0.47
APOBEC3B-202ENST00000335760 SCN7AQ01118 1682 aa17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 ERVV-1B6SEH8 477 aa17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 BCAR3O75815 825 aa17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 DDX58O95786 925 aaKnown RBP17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 GYS1P13807 737 aa17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 HLFQ16534 295 aa17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 SLC16A10Q8TF71 515 aa17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
APOBEC3B-202ENST00000335760 ZBTB7AO95365 584 aa17.98■□□□□ 0.47
APOBEC3B-202ENST00000335760 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
APOBEC3B-202ENST00000335760 FKBP8Q14318 412 aa17.98■□□□□ 0.47
APOBEC3B-202ENST00000335760 MSL1Q68DK7 614 aa17.98■□□□□ 0.47
APOBEC3B-202ENST00000335760 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
APOBEC3B-202ENST00000335760 PLBD2Q8NHP8 589 aa17.98■□□□□ 0.47
APOBEC3B-202ENST00000335760 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
APOBEC3B-202ENST00000335760 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
APOBEC3B-202ENST00000335760 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
APOBEC3B-202ENST00000335760 PI4KAP2A4QPH2 592 aa17.96■□□□□ 0.47
APOBEC3B-202ENST00000335760 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.47
APOBEC3B-202ENST00000335760 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
APOBEC3B-202ENST00000335760 KSR2Q6VAB6 950 aa17.96■□□□□ 0.47
APOBEC3B-202ENST00000335760 GIGYF2Q6Y7W6 1299 aaKnown RBP17.96■□□□□ 0.47
APOBEC3B-202ENST00000335760 NLGN1Q8N2Q7 840 aa17.96■□□□□ 0.47
APOBEC3B-202ENST00000335760 PI4KAP1Q8N8J0 262 aa17.96■□□□□ 0.47
APOBEC3B-202ENST00000335760 MTFR1LQ9H019 292 aa17.96■□□□□ 0.47
APOBEC3B-202ENST00000335760 RGL2O15211 777 aa17.95■□□□□ 0.46
APOBEC3B-202ENST00000335760 ATF5Q9Y2D1 282 aaPredicted RBP17.95■□□□□ 0.46
APOBEC3B-202ENST00000335760 MAP3K2Q9Y2U5 619 aa17.95■□□□□ 0.46
APOBEC3B-202ENST00000335760 NUP98P52948 1817 aa17.95■□□□□ 0.46
APOBEC3B-202ENST00000335760 ARFGEF2Q9Y6D5 1785 aa17.95■□□□□ 0.46
APOBEC3B-202ENST00000335760 ADCY9O60503 1353 aa17.94■□□□□ 0.46
APOBEC3B-202ENST00000335760 PTPRCP08575 1304 aa17.94■□□□□ 0.46
APOBEC3B-202ENST00000335760 KIF16BQ96L93 1317 aa17.94■□□□□ 0.46
APOBEC3B-202ENST00000335760 TBC1D9BQ66K14 1250 aa17.94■□□□□ 0.46
APOBEC3B-202ENST00000335760 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
APOBEC3B-202ENST00000335760 FRAT1Q92837 279 aaPredicted RBP17.94■□□□□ 0.46
APOBEC3B-202ENST00000335760 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
APOBEC3B-202ENST00000335760 F6X3S4 739 aa17.92■□□□□ 0.46
APOBEC3B-202ENST00000335760 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
APOBEC3B-202ENST00000335760 NFIXQ14938 502 aa17.92■□□□□ 0.46
APOBEC3B-202ENST00000335760 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
APOBEC3B-202ENST00000335760 MYD88Q99836 296 aa17.92■□□□□ 0.46
APOBEC3B-202ENST00000335760 NIP7Q9Y221 180 aaKnown RBP eCLIP17.92■□□□□ 0.46
APOBEC3B-202ENST00000335760 IPO8O15397 1037 aaKnown RBP17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 GPTP24298 496 aa17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 TM4SF1P30408 202 aa17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 SETDB2Q96T68 719 aa17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 METTL22Q9BUU2 404 aaPredicted RBP17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 MMP10P09238 476 aa17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 ZNF34Q8IZ26 560 aa17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 ARHGAP45Q92619 1136 aa17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
APOBEC3B-202ENST00000335760 ANKRD36CQ5JPF3 1778 aa17.9■□□□□ 0.46
APOBEC3B-202ENST00000335760 COL24A1Q17RW2 1714 aa17.9■□□□□ 0.46
APOBEC3B-202ENST00000335760 NEXNQ0ZGT2 675 aa17.9■□□□□ 0.46
APOBEC3B-202ENST00000335760 ZKSCAN2Q63HK3 967 aa17.9■□□□□ 0.46
APOBEC3B-202ENST00000335760 SLC4A10Q6U841 1118 aa17.9■□□□□ 0.46
APOBEC3B-202ENST00000335760 SPON1Q9HCB6 807 aa17.9■□□□□ 0.46
APOBEC3B-202ENST00000335760 PARP3Q9Y6F1 533 aa17.9■□□□□ 0.46
APOBEC3B-202ENST00000335760 POLD1P28340 1107 aa17.89■□□□□ 0.45
APOBEC3B-202ENST00000335760 DDR1Q08345 913 aa17.89■□□□□ 0.45
APOBEC3B-202ENST00000335760 ISCA1Q9BUE6 129 aa17.89■□□□□ 0.45
APOBEC3B-202ENST00000335760 CARMIL3Q8ND23 1372 aa17.88■□□□□ 0.45
APOBEC3B-202ENST00000335760 UBN2Q6ZU65 1347 aa17.88■□□□□ 0.45
APOBEC3B-202ENST00000335760 FAM177BA6PVY3 158 aa17.88■□□□□ 0.45
APOBEC3B-202ENST00000335760 POLRMTO00411 1230 aaKnown RBP17.88■□□□□ 0.45
APOBEC3B-202ENST00000335760 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
APOBEC3B-202ENST00000335760 IGKV5-2P06315 115 aa17.87■□□□□ 0.45
APOBEC3B-202ENST00000335760 TRIM27P14373 513 aa17.87■□□□□ 0.45
APOBEC3B-202ENST00000335760 PTGER2P43116 358 aa17.87■□□□□ 0.45
APOBEC3B-202ENST00000335760 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
APOBEC3B-202ENST00000335760 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
APOBEC3B-202ENST00000335760 SUSD4Q5VX71 490 aa17.87■□□□□ 0.45
APOBEC3B-202ENST00000335760 NLRP10Q86W26 655 aa17.87■□□□□ 0.45
APOBEC3B-202ENST00000335760 TNNQ9UQP3 1299 aa17.87■□□□□ 0.45
APOBEC3B-202ENST00000335760 PLIN1O60240 522 aa17.86■□□□□ 0.45
APOBEC3B-202ENST00000335760 SERPINB2P05120 415 aa17.86■□□□□ 0.45
APOBEC3B-202ENST00000335760 CWF19L2Q2TBE0 894 aaKnown RBP17.86■□□□□ 0.45
APOBEC3B-202ENST00000335760 BEND3Q5T5X7 828 aa17.86■□□□□ 0.45
APOBEC3B-202ENST00000335760 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
APOBEC3B-202ENST00000335760 LINS1Q8NG48 757 aa17.86■□□□□ 0.45
APOBEC3B-202ENST00000335760 SGIP1Q9BQI5 828 aa17.86■□□□□ 0.45
APOBEC3B-202ENST00000335760 AFDNP55196 1824 aaKnown RBP17.85■□□□□ 0.45
APOBEC3B-202ENST00000335760 NEURL1BA8MQ27 555 aa17.85■□□□□ 0.45
APOBEC3B-202ENST00000335760 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
APOBEC3B-202ENST00000335760 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.85■□□□□ 0.45
APOBEC3B-202ENST00000335760 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
APOBEC3B-202ENST00000335760 CWC25Q9NXE8 425 aaPredicted RBP17.85■□□□□ 0.45
APOBEC3B-202ENST00000335760 PXDNLA1KZ92 1463 aa17.84■□□□□ 0.45
APOBEC3B-202ENST00000335760 CCDC191Q8NCU4 936 aa17.84■□□□□ 0.45
APOBEC3B-202ENST00000335760 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
APOBEC3B-202ENST00000335760 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
APOBEC3B-202ENST00000335760 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms