RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 DICER1Q9UPY3 1922 aaKnown RBP33.31■■■□□ 2.92
PPP4R4-202ENST00000328839 HTATSF1O43719 755 aaKnown RBP33.3■■■□□ 2.92
PPP4R4-202ENST00000328839 NEFMP07197 916 aa33.3■■■□□ 2.92
PPP4R4-202ENST00000328839 SLX4Q8IY92 1834 aa33.3■■■□□ 2.92
PPP4R4-202ENST00000328839 HTRA3P83110 453 aa33.29■■■□□ 2.92
PPP4R4-202ENST00000328839 DNAJC5GQ8N7S2 189 aa33.29■■■□□ 2.92
PPP4R4-202ENST00000328839 ZNF652Q9Y2D9 606 aa33.29■■■□□ 2.92
PPP4R4-202ENST00000328839 NBPF5PQ86XG9 351 aaPredicted RBP33.28■■■□□ 2.92
PPP4R4-202ENST00000328839 SMC1BQ8NDV3 1235 aa33.28■■■□□ 2.92
PPP4R4-202ENST00000328839 LAMB4A4D0S4 1761 aa33.28■■■□□ 2.92
PPP4R4-202ENST00000328839 ARFGEF2Q9Y6D5 1785 aa33.28■■■□□ 2.92
PPP4R4-202ENST00000328839 CNKSR1Q969H4 720 aa33.27■■■□□ 2.92
PPP4R4-202ENST00000328839 VEGFAP15692 232 aaPredicted RBP33.26■■■□□ 2.91
PPP4R4-202ENST00000328839 TAF7Q15545 349 aaPredicted RBP33.26■■■□□ 2.91
PPP4R4-202ENST00000328839 CLEC4GQ6UXB4 293 aa33.26■■■□□ 2.91
PPP4R4-202ENST00000328839 MIS18AQ9NYP9 233 aa33.26■■■□□ 2.91
PPP4R4-202ENST00000328839 STYK1Q6J9G0 422 aa33.25■■■□□ 2.91
PPP4R4-202ENST00000328839 SRGNP10124 158 aa33.24■■■□□ 2.91
PPP4R4-202ENST00000328839 ERFEQ4G0M1 354 aa33.24■■■□□ 2.91
PPP4R4-202ENST00000328839 NBPF26B4DH59 902 aa33.23■■■□□ 2.91
PPP4R4-202ENST00000328839 DPY19L2Q6NUT2 758 aa33.23■■■□□ 2.91
PPP4R4-202ENST00000328839 PRPF40BQ6NWY9 871 aaKnown RBP33.23■■■□□ 2.91
PPP4R4-202ENST00000328839 NBPF10Q6P3W6 841 aaKnown RBP33.23■■■□□ 2.91
PPP4R4-202ENST00000328839 NBPF15Q8N660 670 aa33.23■■■□□ 2.91
PPP4R4-202ENST00000328839 MASTLQ96GX5 879 aa33.23■■■□□ 2.91
PPP4R4-202ENST00000328839 TAOK3Q9H2K8 898 aa33.23■■■□□ 2.91
PPP4R4-202ENST00000328839 KDM3BQ7LBC6 1761 aa33.22■■■□□ 2.91
PPP4R4-202ENST00000328839 NIP7Q9Y221 180 aaKnown RBP eCLIP33.22■■■□□ 2.91
PPP4R4-202ENST00000328839 FAM177BA6PVY3 158 aa33.2■■■□□ 2.91
PPP4R4-202ENST00000328839 SOGA3Q5TF21 947 aa33.18■■■□□ 2.9
PPP4R4-202ENST00000328839 KLRG1Q96E93 195 aa33.18■■■□□ 2.9
PPP4R4-202ENST00000328839 LTBP3Q9NS15 1303 aa33.18■■■□□ 2.9
PPP4R4-202ENST00000328839 TPTE2Q6XPS3 522 aa33.17■■■□□ 2.9
PPP4R4-202ENST00000328839 NGEFQ8N5V2 710 aa33.16■■■□□ 2.9
PPP4R4-202ENST00000328839 PNISRQ8TF01 805 aaKnown RBP33.16■■■□□ 2.9
PPP4R4-202ENST00000328839 MAPK8IP3Q9UPT6 1336 aa33.14■■■□□ 2.9
PPP4R4-202ENST00000328839 NPR1P16066 1061 aa33.14■■■□□ 2.9
PPP4R4-202ENST00000328839 HLFQ16534 295 aa33.14■■■□□ 2.9
PPP4R4-202ENST00000328839 NUP98P52948 1817 aa33.14■■■□□ 2.9
PPP4R4-202ENST00000328839 GTF2E1P29083 439 aaPredicted RBP33.13■■■□□ 2.89
PPP4R4-202ENST00000328839 NFE2L2Q16236 605 aa33.13■■■□□ 2.89
PPP4R4-202ENST00000328839 PLEKHF1Q96S99 279 aa33.13■■■□□ 2.89
PPP4R4-202ENST00000328839 THUMPD2Q9BTF0 503 aaKnown RBP33.13■■■□□ 2.89
PPP4R4-202ENST00000328839 POTECB2RU33 542 aa33.12■■■□□ 2.89
PPP4R4-202ENST00000328839 RGL2O15211 777 aa33.12■■■□□ 2.89
PPP4R4-202ENST00000328839 CCDC93Q567U6 631 aa33.1■■■□□ 2.89
PPP4R4-202ENST00000328839 PNNQ9H307 717 aaKnown RBP33.1■■■□□ 2.89
PPP4R4-202ENST00000328839 RRP7AQ9Y3A4 280 aaKnown RBP33.1■■■□□ 2.89
PPP4R4-202ENST00000328839 DDNO94850 711 aaPredicted RBP33.08■■■□□ 2.89
PPP4R4-202ENST00000328839 EIF4A1P60842 406 aaKnown RBP33.08■■■□□ 2.89
PPP4R4-202ENST00000328839 KLRG2A4D1S0 409 aaPredicted RBP33.07■■■□□ 2.88
PPP4R4-202ENST00000328839 MYL6BP14649 208 aa33.07■■■□□ 2.88
PPP4R4-202ENST00000328839 KIF6Q6ZMV9 814 aa33.07■■■□□ 2.88
PPP4R4-202ENST00000328839 JMYQ8N9B5 988 aa33.06■■■□□ 2.88
PPP4R4-202ENST00000328839 C7orf43Q8WVR3 580 aa33.06■■■□□ 2.88
PPP4R4-202ENST00000328839 MAP3K15Q6ZN16 1313 aa33.04■■■□□ 2.88
PPP4R4-202ENST00000328839 OLFM4Q6UX06 510 aa33.04■■■□□ 2.88
PPP4R4-202ENST00000328839 NYXQ9GZU5 481 aa33.04■■■□□ 2.88
PPP4R4-202ENST00000328839 ERVV-1B6SEH8 477 aa33.03■■■□□ 2.88
PPP4R4-202ENST00000328839 FKBP4Q02790 459 aaKnown RBP eCLIP33.03■■■□□ 2.88
PPP4R4-202ENST00000328839 TTLL7Q6ZT98 887 aa33.03■■■□□ 2.88
PPP4R4-202ENST00000328839 NUTM1Q86Y26 1132 aa33.03■■■□□ 2.88
PPP4R4-202ENST00000328839 ALDH1B1P30837 517 aa33.02■■■□□ 2.88
PPP4R4-202ENST00000328839 ZBTB3Q9H5J0 574 aa33.02■■■□□ 2.88
PPP4R4-202ENST00000328839 ZNF277Q9NRM2 450 aaPredicted RBP33.02■■■□□ 2.88
PPP4R4-202ENST00000328839 ABCC12Q96J65 1359 aa33.01■■■□□ 2.88
PPP4R4-202ENST00000328839 GPTP24298 496 aa33■■■□□ 2.87
PPP4R4-202ENST00000328839 RTKN2Q8IZC4 609 aa33■■■□□ 2.87
PPP4R4-202ENST00000328839 TSPYL4Q9UJ04 414 aa33■■■□□ 2.87
PPP4R4-202ENST00000328839 SCN4AP35499 1836 aa33■■■□□ 2.87
PPP4R4-202ENST00000328839 CHADLQ6NUI6 762 aa32.99■■■□□ 2.87
PPP4R4-202ENST00000328839 POTEIP0CG38 1075 aa32.98■■■□□ 2.87
PPP4R4-202ENST00000328839 POTEJP0CG39 1038 aa32.98■■■□□ 2.87
PPP4R4-202ENST00000328839 IQCA1LA6NCM1 817 aa32.97■■■□□ 2.87
PPP4R4-202ENST00000328839 RIPK4P57078 832 aa32.96■■■□□ 2.87
PPP4R4-202ENST00000328839 RPGRQ92834 1020 aaKnown RBP32.96■■■□□ 2.87
PPP4R4-202ENST00000328839 UBN2Q6ZU65 1347 aa32.95■■■□□ 2.86
PPP4R4-202ENST00000328839 ZNF541Q9H0D2 1346 aa32.95■■■□□ 2.86
PPP4R4-202ENST00000328839 RALBP1Q15311 655 aa32.94■■■□□ 2.86
PPP4R4-202ENST00000328839 CRY2Q49AN0 593 aa32.94■■■□□ 2.86
PPP4R4-202ENST00000328839 EIF2S2P20042 333 aaKnown RBP32.93■■■□□ 2.86
PPP4R4-202ENST00000328839 IARSP41252 1262 aaKnown RBP32.93■■■□□ 2.86
PPP4R4-202ENST00000328839 SYNE4Q8N205 404 aa32.93■■■□□ 2.86
PPP4R4-202ENST00000328839 L3MBTL3Q96JM7 780 aaPredicted RBP32.93■■■□□ 2.86
PPP4R4-202ENST00000328839 ERBB4Q15303 1308 aa32.93■■■□□ 2.86
PPP4R4-202ENST00000328839 SUSD4Q5VX71 490 aa32.92■■■□□ 2.86
PPP4R4-202ENST00000328839 IBTKQ9P2D0 1353 aaPredicted RBP32.92■■■□□ 2.86
PPP4R4-202ENST00000328839 TAF1DQ9H5J8 278 aaPredicted RBP32.91■■■□□ 2.86
PPP4R4-202ENST00000328839 PCNTO95613 3336 aa32.91■■■□□ 2.86
PPP4R4-202ENST00000328839 GIGYF2Q6Y7W6 1299 aaKnown RBP32.9■■■□□ 2.86
PPP4R4-202ENST00000328839 ZNF34Q8IZ26 560 aa32.9■■■□□ 2.86
PPP4R4-202ENST00000328839 RIC1Q4ADV7 1423 aa32.89■■■□□ 2.86
PPP4R4-202ENST00000328839 LMOD3Q0VAK6 560 aa32.89■■■□□ 2.86
PPP4R4-202ENST00000328839 EAPPQ56P03 285 aaPredicted RBP32.89■■■□□ 2.86
PPP4R4-202ENST00000328839 TMPOP42166 694 aaKnown RBP32.88■■■□□ 2.85
PPP4R4-202ENST00000328839 COL13A1Q5TAT6 717 aaPredicted RBP32.88■■■□□ 2.85
PPP4R4-202ENST00000328839 PPP1R42Q7Z4L9 355 aa32.88■■■□□ 2.85
PPP4R4-202ENST00000328839 LDHDQ86WU2 507 aa32.88■■■□□ 2.85
PPP4R4-202ENST00000328839 NTSR2O95665 410 aa32.87■■■□□ 2.85
PPP4R4-202ENST00000328839 JDP2Q8WYK2 163 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms