RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
SF3B2-201ENST00000322535 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
SF3B2-201ENST00000322535 USP25Q9UHP3 1055 aa12.35□□□□□ -0.43
SF3B2-201ENST00000322535 KIF16BQ96L93 1317 aa12.35□□□□□ -0.43
SF3B2-201ENST00000322535 MST1RQ04912 1400 aa12.35□□□□□ -0.43
SF3B2-201ENST00000322535 NCOA3Q9Y6Q9 1424 aa12.35□□□□□ -0.43
SF3B2-201ENST00000322535 TSPYL6Q8N831 410 aa12.35□□□□□ -0.43
SF3B2-201ENST00000322535 FLT4P35916 1363 aa12.35□□□□□ -0.43
SF3B2-201ENST00000322535 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-201ENST00000322535 TRIM66O15016 1216 aa12.34□□□□□ -0.43
SF3B2-201ENST00000322535 PHF23Q9BUL5 403 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-201ENST00000322535 DONSONQ9NYP3 566 aa12.34□□□□□ -0.43
SF3B2-201ENST00000322535 DDX41Q9UJV9 622 aaKnown RBP12.34□□□□□ -0.43
SF3B2-201ENST00000322535 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
SF3B2-201ENST00000322535 DRC1Q96MC2 740 aa12.34□□□□□ -0.43
SF3B2-201ENST00000322535 SBNO1A3KN83 1393 aa12.34□□□□□ -0.43
SF3B2-201ENST00000322535 INSRP06213 1382 aa12.34□□□□□ -0.43
SF3B2-201ENST00000322535 CCDC189A1A4V9 331 aa12.33□□□□□ -0.44
SF3B2-201ENST00000322535 WDR63Q8IWG1 891 aa12.33□□□□□ -0.44
SF3B2-201ENST00000322535 ST7Q9NRC1 585 aa12.33□□□□□ -0.44
SF3B2-201ENST00000322535 TDO2P48775 406 aa12.33□□□□□ -0.44
SF3B2-201ENST00000322535 DIAPH3Q9NSV4 1193 aa12.33□□□□□ -0.44
SF3B2-201ENST00000322535 PIP4K2BP78356 416 aa12.32□□□□□ -0.44
SF3B2-201ENST00000322535 C10orf67Q8IYJ2 551 aa12.32□□□□□ -0.44
SF3B2-201ENST00000322535 SUFUQ9UMX1 484 aa12.32□□□□□ -0.44
SF3B2-201ENST00000322535 TSGA10IPQ3SY00 556 aa12.32□□□□□ -0.44
SF3B2-201ENST00000322535 NECTIN2Q92692 538 aa12.32□□□□□ -0.44
SF3B2-201ENST00000322535 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
SF3B2-201ENST00000322535 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
SF3B2-201ENST00000322535 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
SF3B2-201ENST00000322535 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
SF3B2-201ENST00000322535 RAI14Q9P0K7 980 aa12.31□□□□□ -0.44
SF3B2-201ENST00000322535 NCBP1Q09161 790 aaKnown RBP12.31□□□□□ -0.44
SF3B2-201ENST00000322535 TSPY26PQ9H489 355 aa12.31□□□□□ -0.44
SF3B2-201ENST00000322535 MORC2Q9Y6X9 1032 aaPredicted RBP12.31□□□□□ -0.44
SF3B2-201ENST00000322535 NWD1Q149M9 1564 aa12.31□□□□□ -0.44
SF3B2-201ENST00000322535 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
SF3B2-201ENST00000322535 ANKRD24Q8TF21 1146 aa12.31□□□□□ -0.44
SF3B2-201ENST00000322535 IP6K1Q92551 441 aa12.31□□□□□ -0.44
SF3B2-201ENST00000322535 NLRP2Q9NX02 1062 aa12.31□□□□□ -0.44
SF3B2-201ENST00000322535 CCDC27Q2M243 656 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 ARHGEF25Q86VW2 580 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 SPC24Q8NBT2 197 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 ZNF446Q9NWS9 450 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 NPHP3Q7Z494 1330 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 NBPF11Q86T75 865 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 C8orf58Q8NAV2 365 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 KIF2CQ99661 725 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 NOL10Q9BSC4 688 aaKnown RBP12.3□□□□□ -0.44
SF3B2-201ENST00000322535 CXorf56Q9H5V9 222 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 BRMS1Q9HCU9 246 aa12.3□□□□□ -0.44
SF3B2-201ENST00000322535 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.3□□□□□ -0.446e-6■■■■■ 27.5
SF3B2-201ENST00000322535 V9GYY5 206 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-201ENST00000322535 ADCY5O95622 1261 aa12.29□□□□□ -0.44
SF3B2-201ENST00000322535 KCNH5Q8NCM2 988 aa12.29□□□□□ -0.44
SF3B2-201ENST00000322535 PSMD1Q99460 953 aa12.29□□□□□ -0.44
SF3B2-201ENST00000322535 LCMT1Q9UIC8 334 aa12.29□□□□□ -0.44
SF3B2-201ENST00000322535 CASQ1P31415 396 aa12.29□□□□□ -0.44
SF3B2-201ENST00000322535 NPHP1O15259 732 aa12.28□□□□□ -0.44
SF3B2-201ENST00000322535 CTR9Q6PD62 1173 aa12.28□□□□□ -0.44
SF3B2-201ENST00000322535 NUCB2P80303 420 aa12.28□□□□□ -0.44
SF3B2-201ENST00000322535 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
SF3B2-201ENST00000322535 PYCARDQ9ULZ3 195 aa12.28□□□□□ -0.44
SF3B2-201ENST00000322535 IGSF1Q8N6C5 1336 aa12.28□□□□□ -0.44
SF3B2-201ENST00000322535 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
SF3B2-201ENST00000322535 ZNF853P0CG23 659 aa12.27□□□□□ -0.44
SF3B2-201ENST00000322535 BIRC2Q13490 618 aa12.27□□□□□ -0.44
SF3B2-201ENST00000322535 MPRIPQ6WCQ1 1025 aa12.27□□□□□ -0.44
SF3B2-201ENST00000322535 SYT10Q6XYQ8 523 aa12.27□□□□□ -0.44
SF3B2-201ENST00000322535 KRT222Q8N1A0 295 aa12.27□□□□□ -0.44
SF3B2-201ENST00000322535 ZNF513Q8N8E2 541 aaPredicted RBP12.27□□□□□ -0.44
SF3B2-201ENST00000322535 RTF1Q92541 710 aaKnown RBP12.27□□□□□ -0.44
SF3B2-201ENST00000322535 LGR6Q9HBX8 967 aa12.27□□□□□ -0.44
SF3B2-201ENST00000322535 STRN4Q9NRL3 753 aa12.27□□□□□ -0.44
SF3B2-201ENST00000322535 CTIFO43310 598 aaKnown RBP12.27□□□□□ -0.45
SF3B2-201ENST00000322535 CYP2C19P33261 490 aa12.27□□□□□ -0.45
SF3B2-201ENST00000322535 E2F4Q16254 413 aa12.27□□□□□ -0.45
SF3B2-201ENST00000322535 JRKLQ9Y4A0 524 aa12.27□□□□□ -0.45
SF3B2-201ENST00000322535 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
SF3B2-201ENST00000322535 KIF18AQ8NI77 898 aa12.27□□□□□ -0.45
SF3B2-201ENST00000322535 C16orf45Q96MC5 204 aaPredicted RBP12.27□□□□□ -0.45
SF3B2-201ENST00000322535 KIAA0232Q92628 1395 aa12.26□□□□□ -0.45
SF3B2-201ENST00000322535 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
SF3B2-201ENST00000322535 NOB1Q9ULX3 412 aaKnown RBP12.26□□□□□ -0.45
SF3B2-201ENST00000322535 TTC36A6NLP5 189 aa12.26□□□□□ -0.45
SF3B2-201ENST00000322535 MYO1CO00159 1063 aa12.26□□□□□ -0.45
SF3B2-201ENST00000322535 GDPD2Q9HCC8 539 aa12.26□□□□□ -0.45
SF3B2-201ENST00000322535 SPATA31A3Q5VYP0 1347 aa12.26□□□□□ -0.45
SF3B2-201ENST00000322535 ANAPC15P60006 121 aa12.25□□□□□ -0.45
SF3B2-201ENST00000322535 ITPRIPQ8IWB1 547 aa12.25□□□□□ -0.45
SF3B2-201ENST00000322535 PRDM11Q9NQV5 511 aa12.25□□□□□ -0.45
SF3B2-201ENST00000322535 LTN1O94822 1766 aa12.25□□□□□ -0.45
SF3B2-201ENST00000322535 ARID4AP29374 1257 aaPredicted RBP12.25□□□□□ -0.45
SF3B2-201ENST00000322535 NBPF10Q6P3W6 841 aaKnown RBP12.25□□□□□ -0.45
SF3B2-201ENST00000322535 IL17REQ8NFR9 667 aa12.25□□□□□ -0.45
SF3B2-201ENST00000322535 ZNF428Q96B54 188 aa12.25□□□□□ -0.45
SF3B2-201ENST00000322535 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
SF3B2-201ENST00000322535 CT47B1P0C2W7 299 aaPredicted RBP12.24□□□□□ -0.45
SF3B2-201ENST00000322535 RGPD2P0DJD1 1756 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms