RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 HSP90AB4PQ58FF6 505 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 FAM173BQ6P4H8 233 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 LMOD2Q6P5Q4 547 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.38■□□□□ 0.69
PACS1-201ENST00000320580 KIF2CQ99661 725 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 GBP3Q9H0R5 595 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 CLGNO14967 610 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 CTAGE5O15320 804 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 SYCP1Q15431 976 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 FAM107BQ9H098 131 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 F6X3S4 739 aa19.37■□□□□ 0.69
PACS1-201ENST00000320580 AK2P54819 239 aa19.37■□□□□ 0.69
PACS1-201ENST00000320580 KIF4BQ2VIQ3 1234 aa19.37■□□□□ 0.69
PACS1-201ENST00000320580 AOPEPQ8N6M6 819 aa19.37■□□□□ 0.69
PACS1-201ENST00000320580 SMARCC1Q92922 1105 aaPredicted RBP19.37■□□□□ 0.69
PACS1-201ENST00000320580 COG3Q96JB2 828 aa19.37■□□□□ 0.69
PACS1-201ENST00000320580 MEIS3Q99687 375 aa19.37■□□□□ 0.69
PACS1-201ENST00000320580 EFCC1Q9HA90 598 aa19.37■□□□□ 0.69
PACS1-201ENST00000320580 SCAF11Q99590 1463 aaKnown RBP19.37■□□□□ 0.69
PACS1-201ENST00000320580 TOP1P11387 765 aaKnown RBP19.37■□□□□ 0.69
PACS1-201ENST00000320580 BRPF1P55201 1214 aaPredicted RBP19.37■□□□□ 0.69
PACS1-201ENST00000320580 IPO7O95373 1038 aaKnown RBP19.37■□□□□ 0.69
PACS1-201ENST00000320580 MYO5CQ9NQX4 1742 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 DDIT3P35638 169 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 TSPYL6Q8N831 410 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 CARD6Q9BX69 1037 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 SRRTQ9BXP5 876 aaKnown RBP19.36■□□□□ 0.69
PACS1-201ENST00000320580 SLC52A1Q9NWF4 448 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 SHTN1A0MZ66 631 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 CRACR2AQ9BSW2 395 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 C9orf78Q9NZ63 289 aaPredicted RBP19.36■□□□□ 0.69
PACS1-201ENST00000320580 MORC2Q9Y6X9 1032 aaPredicted RBP19.36■□□□□ 0.69
PACS1-201ENST00000320580 RAD51AP2Q09MP3 1159 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 ANKRD7Q92527 254 aa19.36■□□□□ 0.69
PACS1-201ENST00000320580 CDC42BPAQ5VT25 1732 aa19.35■□□□□ 0.69
PACS1-201ENST00000320580 FSIP1Q8NA03 581 aa19.35■□□□□ 0.69
PACS1-201ENST00000320580 ANKRD20A12PQ8NF67 263 aa19.35■□□□□ 0.69
PACS1-201ENST00000320580 AKAP17AQ02040 695 aaKnown RBP19.35■□□□□ 0.69
PACS1-201ENST00000320580 CCDC12Q8WUD4 166 aaPredicted RBP19.35■□□□□ 0.69
PACS1-201ENST00000320580 CHMP4CQ96CF2 233 aa19.35■□□□□ 0.69
PACS1-201ENST00000320580 SMC1AQ14683 1233 aaKnown RBP19.35■□□□□ 0.69
PACS1-201ENST00000320580 CCAR1Q8IX12 1150 aaKnown RBP19.35■□□□□ 0.69
PACS1-201ENST00000320580 SIL1Q9H173 461 aa19.34■□□□□ 0.69
PACS1-201ENST00000320580 ZDHHC9Q9Y397 364 aa19.34■□□□□ 0.69
PACS1-201ENST00000320580 SLFN14P0C7P3 912 aa19.34■□□□□ 0.69
PACS1-201ENST00000320580 ST7Q9NRC1 585 aa19.34■□□□□ 0.69
PACS1-201ENST00000320580 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
PACS1-201ENST00000320580 NPHP3Q7Z494 1330 aa19.34■□□□□ 0.69
PACS1-201ENST00000320580 CPA1P15085 419 aa19.34■□□□□ 0.69
PACS1-201ENST00000320580 KMT5BQ4FZB7 885 aa19.34■□□□□ 0.69
PACS1-201ENST00000320580 HOOK1Q9UJC3 728 aaKnown RBP19.34■□□□□ 0.69
PACS1-201ENST00000320580 ATAD2Q6PL18 1390 aa19.33■□□□□ 0.69
PACS1-201ENST00000320580 ISM2Q6H9L7 571 aa19.33■□□□□ 0.69
PACS1-201ENST00000320580 TCEANC2Q96MN5 208 aa19.33■□□□□ 0.69
PACS1-201ENST00000320580 LIG1P18858 919 aa19.33■□□□□ 0.68
PACS1-201ENST00000320580 CACTINQ8WUQ7 758 aaKnown RBP19.33■□□□□ 0.68
PACS1-201ENST00000320580 VAMP4O75379 141 aa19.32■□□□□ 0.68
PACS1-201ENST00000320580 ADCY10Q96PN6 1610 aa19.32■□□□□ 0.68
PACS1-201ENST00000320580 PPFIBP1Q86W92 1011 aa19.32■□□□□ 0.68
PACS1-201ENST00000320580 G3BP1Q13283 466 aaKnown RBP eCLIP19.32■□□□□ 0.68
PACS1-201ENST00000320580 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
PACS1-201ENST00000320580 CFAP65Q6ZU64 1925 aaKnown RBP19.32■□□□□ 0.68
PACS1-201ENST00000320580 PPM1EQ8WY54 764 aa19.32■□□□□ 0.68
PACS1-201ENST00000320580 MYO1CO00159 1063 aa19.31■□□□□ 0.68
PACS1-201ENST00000320580 RRP15Q9Y3B9 282 aaKnown RBP19.31■□□□□ 0.68
PACS1-201ENST00000320580 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.31■□□□□ 0.68
PACS1-201ENST00000320580 ATP7AQ04656 1500 aa19.31■□□□□ 0.68
PACS1-201ENST00000320580 CHMLP26374 656 aa19.31■□□□□ 0.68
PACS1-201ENST00000320580 GUCY1B3Q02153 619 aa19.31■□□□□ 0.68
PACS1-201ENST00000320580 PALD1Q9ULE6 856 aa19.31■□□□□ 0.68
PACS1-201ENST00000320580 CEP85Q6P2H3 762 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 SRGAP3O43295 1099 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 KIF5CO60282 957 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 RTEL1-TNFRSF6BF6WH68 1400 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 TXNDC2Q86VQ3 553 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 RNF216Q9NWF9 866 aaPredicted RBP19.3■□□□□ 0.68
PACS1-201ENST00000320580 GCC2Q8IWJ2 1684 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 PREX2Q70Z35 1606 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 IFNKQ9P0W0 207 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 JRKLQ9Y4A0 524 aa19.3■□□□□ 0.68
PACS1-201ENST00000320580 E2F4Q16254 413 aa19.29■□□□□ 0.68
PACS1-201ENST00000320580 GOLGA1Q92805 767 aa19.29■□□□□ 0.68
PACS1-201ENST00000320580 RAD50Q92878 1312 aa19.29■□□□□ 0.68
PACS1-201ENST00000320580 TUBB4AP04350 444 aa19.29■□□□□ 0.68
PACS1-201ENST00000320580 C8orf58Q8NAV2 365 aa19.29■□□□□ 0.68
PACS1-201ENST00000320580 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
PACS1-201ENST00000320580 NPC1L1Q9UHC9 1359 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 ICE2Q659A1 982 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 LRRC8AQ8IWT6 810 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 MIS18AQ9NYP9 233 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 CYP2E1P05181 493 aaPredicted RBP19.28■□□□□ 0.68
PACS1-201ENST00000320580 NBPF11Q86T75 865 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 SEC31AO94979 1220 aaKnown RBP19.28■□□□□ 0.68
PACS1-201ENST00000320580 RNF187Q5TA31 235 aaPredicted RBP19.28■□□□□ 0.68
PACS1-201ENST00000320580 LOC102724159A0A0B4J2E5 919 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 LMOD1P29536 600 aaPredicted RBP19.28■□□□□ 0.68
PACS1-201ENST00000320580 MAP2K2P36507 400 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 CLCN6P51797 869 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 PWP2Q15269 919 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms