RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 NOL10Q9BSC4 688 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-201ENST00000319172 FBXO3Q9UK99 471 aa11.16□□□□□ -0.62
TMEM39A-201ENST00000319172 ABCC4O15439 1325 aa11.16□□□□□ -0.62
TMEM39A-201ENST00000319172 STK3Q13188 491 aa11.16□□□□□ -0.62
TMEM39A-201ENST00000319172 BICC1Q9H694 974 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-201ENST00000319172 DLC1Q96QB1 1528 aa11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 GSE1Q14687 1217 aa11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 FAM98CQ17RN3 349 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 PROSER3Q2NL68 480 aa11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 SYNE3Q6ZMZ3 975 aa11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 CYP46A1Q9Y6A2 500 aa11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 ANKRD18BA2A2Z9 1011 aa11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 SF3A1Q15459 793 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 RRP12Q5JTH9 1297 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 SYAP1Q96A49 352 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 ABCF2Q9UG63 623 aa11.15□□□□□ -0.62
TMEM39A-201ENST00000319172 PTCH1Q13635 1447 aa11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 RTL1A6NKG5 1358 aa11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 SPATA31A3Q5VYP0 1347 aa11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 CPLX2Q6PUV4 134 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 ATP6V1DQ9Y5K8 247 aa11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 USP44Q9H0E7 712 aa11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 PPLO60437 1756 aa11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 GOLIM4O00461 696 aa11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 PPP1R1BQ9UD71 204 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 AKAP2Q9Y2D5 859 aa11.14□□□□□ -0.63
TMEM39A-201ENST00000319172 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 FAM89AQ96GI7 184 aa11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 CASTP20810 708 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 MCM2P49736 904 aa11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 DDX46Q7L014 1031 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 METTL22Q9BUU2 404 aaPredicted RBP11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 KIF24Q5T7B8 1368 aa11.13□□□□□ -0.63
TMEM39A-201ENST00000319172 RAD21O60216 631 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 MTMR7Q9Y216 660 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 MED14O60244 1454 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 AKAP17AQ02040 695 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 CSPP1Q1MSJ5 1256 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 LRP2BPQ9P2M1 347 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 WDR17Q8IZU2 1322 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 TECPR2O15040 1411 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 SUCLG2Q96I99 432 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 NIP7Q9Y221 180 aaKnown RBP eCLIP11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 CHAF1AQ13111 956 aaPredicted RBP11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 EVI5LQ96CN4 794 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 RAI14Q9P0K7 980 aa11.12□□□□□ -0.63
TMEM39A-201ENST00000319172 USP31Q70CQ4 1352 aa11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 PLBD2Q8NHP8 589 aa11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 AMOTL1Q8IY63 956 aa11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 CARD10Q9BWT7 1032 aa11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 LRRC7Q96NW7 1537 aa11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 RIMS1Q86UR5 1692 aaKnown RBP11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 ERICH2A1L162 156 aa11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 AK7Q96M32 723 aa11.11□□□□□ -0.63
TMEM39A-201ENST00000319172 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 GCKRQ14397 625 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 ASAP1Q9ULH1 1129 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 CYP27B1O15528 508 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 CLSTN1O94985 981 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 SKOR2Q2VWA4 1001 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 CDC42BPGQ6DT37 1551 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 ERVV-2B6SEH9 535 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 TFCP2Q12800 502 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 DNTTIP2Q5QJE6 756 aaKnown RBP11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 NEURL4Q96JN8 1562 aa11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■□□□ 11.9
TMEM39A-201ENST00000319172 POLR1AO95602 1720 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 CEP170BQ9Y4F5 1589 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-201ENST00000319172 OVOS2A0A0J9YW53 1432 aa11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 OVOS2Q6IE36 1432 aa11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 TRAK2O60296 914 aa11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 RFC4P35249 363 aa11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 IRS4O14654 1257 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 PRPF40AO75400 957 aaKnown RBP11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 BEND3Q5T5X7 828 aa11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 DRC7Q8IY82 874 aa11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 CHMP4CQ96CF2 233 aa11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 ESYT1Q9BSJ8 1104 aa11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 IQSEC3Q9UPP2 1182 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-201ENST00000319172 TRIM29Q14134 588 aa11.08□□□□□ -0.64
TMEM39A-201ENST00000319172 GLIPR1L2Q4G1C9 344 aa11.08□□□□□ -0.64
TMEM39A-201ENST00000319172 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
TMEM39A-201ENST00000319172 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms