RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 ZC3H4Q9UPT8 1303 aaKnown RBP16.31■□□□□ 0.2
TPT1-201ENST00000309246 NFKBIEO00221 500 aa16.31■□□□□ 0.2
TPT1-201ENST00000309246 HTRA3P83110 453 aa16.31■□□□□ 0.2
TPT1-201ENST00000309246 PRR5LQ6MZQ0 368 aa16.31■□□□□ 0.2
TPT1-201ENST00000309246 DNAJC5GQ8N7S2 189 aa16.31■□□□□ 0.2
TPT1-201ENST00000309246 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.2
TPT1-201ENST00000309246 LAMB4A4D0S4 1761 aa16.31■□□□□ 0.2
TPT1-201ENST00000309246 CAMTA2O94983 1202 aa16.3■□□□□ 0.2
TPT1-201ENST00000309246 U2AF1L5P0DN76 240 aaPredicted RBP16.3■□□□□ 0.2
TPT1-201ENST00000309246 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
TPT1-201ENST00000309246 U2AF1Q01081 240 aaKnown RBP eCLIP16.3■□□□□ 0.2
TPT1-201ENST00000309246 FSTL1Q12841 308 aa16.3■□□□□ 0.2
TPT1-201ENST00000309246 NPM2Q86SE8 214 aaKnown RBP16.3■□□□□ 0.2
TPT1-201ENST00000309246 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
TPT1-201ENST00000309246 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
TPT1-201ENST00000309246 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
TPT1-201ENST00000309246 PDE6BP35913 854 aa16.29■□□□□ 0.2
TPT1-201ENST00000309246 MCM10Q7L590 875 aa16.29■□□□□ 0.2
TPT1-201ENST00000309246 BRIP1Q9BX63 1249 aa16.29■□□□□ 0.2
TPT1-201ENST00000309246 USP16Q9Y5T5 823 aa16.29■□□□□ 0.2
TPT1-201ENST00000309246 GLTPD2A6NH11 291 aa16.28■□□□□ 0.2
TPT1-201ENST00000309246 DZIP3Q86Y13 1208 aaKnown RBP16.28■□□□□ 0.2
TPT1-201ENST00000309246 CNBD1Q8NA66 436 aa16.28■□□□□ 0.2
TPT1-201ENST00000309246 SETDB2Q96T68 719 aa16.28■□□□□ 0.2
TPT1-201ENST00000309246 NPHP1O15259 732 aa16.27■□□□□ 0.2
TPT1-201ENST00000309246 C21orf2O43822 256 aa16.27■□□□□ 0.2
TPT1-201ENST00000309246 DCTN1Q14203 1278 aa16.27■□□□□ 0.2
TPT1-201ENST00000309246 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.2
TPT1-201ENST00000309246 KDM3BQ7LBC6 1761 aa16.26■□□□□ 0.19
TPT1-201ENST00000309246 SMC1BQ8NDV3 1235 aa16.26■□□□□ 0.19
TPT1-201ENST00000309246 PDZRN3Q9UPQ7 1066 aa16.26■□□□□ 0.19
TPT1-201ENST00000309246 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
TPT1-201ENST00000309246 VEGFAP15692 232 aaPredicted RBP16.25■□□□□ 0.19
TPT1-201ENST00000309246 ST5P78524 1137 aa16.25■□□□□ 0.19
TPT1-201ENST00000309246 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
TPT1-201ENST00000309246 NUP98P52948 1817 aa16.24■□□□□ 0.19
TPT1-201ENST00000309246 ERFEQ4G0M1 354 aa16.23■□□□□ 0.19
TPT1-201ENST00000309246 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
TPT1-201ENST00000309246 CNKSR1Q969H4 720 aa16.23■□□□□ 0.19
TPT1-201ENST00000309246 NBPF26B4DH59 902 aa16.22■□□□□ 0.19
TPT1-201ENST00000309246 SRGNP10124 158 aa16.22■□□□□ 0.19
TPT1-201ENST00000309246 PRPF40BQ6NWY9 871 aaKnown RBP16.22■□□□□ 0.19
TPT1-201ENST00000309246 NBPF10Q6P3W6 841 aaKnown RBP16.22■□□□□ 0.19
TPT1-201ENST00000309246 NBPF5PQ86XG9 351 aaPredicted RBP16.22■□□□□ 0.19
TPT1-201ENST00000309246 NBPF15Q8N660 670 aa16.22■□□□□ 0.19
TPT1-201ENST00000309246 TAOK3Q9H2K8 898 aa16.22■□□□□ 0.19
TPT1-201ENST00000309246 LTBP3Q9NS15 1303 aa16.21■□□□□ 0.19
TPT1-201ENST00000309246 POTECB2RU33 542 aa16.21■□□□□ 0.19
TPT1-201ENST00000309246 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.19
TPT1-201ENST00000309246 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
TPT1-201ENST00000309246 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
TPT1-201ENST00000309246 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
TPT1-201ENST00000309246 ZNF652Q9Y2D9 606 aa16.21■□□□□ 0.19
TPT1-201ENST00000309246 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
TPT1-201ENST00000309246 JMYQ8N9B5 988 aa16.2■□□□□ 0.18
TPT1-201ENST00000309246 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
TPT1-201ENST00000309246 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
TPT1-201ENST00000309246 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
TPT1-201ENST00000309246 SCN4AP35499 1836 aa16.18■□□□□ 0.18
TPT1-201ENST00000309246 SOGA3Q5TF21 947 aa16.18■□□□□ 0.18
TPT1-201ENST00000309246 NPR1P16066 1061 aa16.17■□□□□ 0.18
TPT1-201ENST00000309246 HLFQ16534 295 aa16.17■□□□□ 0.18
TPT1-201ENST00000309246 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
TPT1-201ENST00000309246 DDNO94850 711 aaPredicted RBP16.16■□□□□ 0.18
TPT1-201ENST00000309246 NEFMP07197 916 aa16.16■□□□□ 0.18
TPT1-201ENST00000309246 CCDC93Q567U6 631 aa16.16■□□□□ 0.18
TPT1-201ENST00000309246 TPTE2Q6XPS3 522 aa16.16■□□□□ 0.18
TPT1-201ENST00000309246 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
TPT1-201ENST00000309246 RGL2O15211 777 aa16.15■□□□□ 0.18
TPT1-201ENST00000309246 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
TPT1-201ENST00000309246 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
TPT1-201ENST00000309246 THUMPD2Q9BTF0 503 aaKnown RBP16.15■□□□□ 0.18
TPT1-201ENST00000309246 KLRG2A4D1S0 409 aaPredicted RBP16.14■□□□□ 0.17
TPT1-201ENST00000309246 POTEIP0CG38 1075 aa16.14■□□□□ 0.17
TPT1-201ENST00000309246 POTEJP0CG39 1038 aa16.14■□□□□ 0.17
TPT1-201ENST00000309246 PLEKHF1Q96S99 279 aa16.14■□□□□ 0.17
TPT1-201ENST00000309246 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
TPT1-201ENST00000309246 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
TPT1-201ENST00000309246 NFE2L2Q16236 605 aa16.13■□□□□ 0.17
TPT1-201ENST00000309246 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
TPT1-201ENST00000309246 EIF4A1P60842 406 aaKnown RBP16.12■□□□□ 0.17
TPT1-201ENST00000309246 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
TPT1-201ENST00000309246 COL13A1Q5TAT6 717 aaPredicted RBP16.12■□□□□ 0.17
TPT1-201ENST00000309246 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
TPT1-201ENST00000309246 NUTM1Q86Y26 1132 aa16.12■□□□□ 0.17
TPT1-201ENST00000309246 ZNF277Q9NRM2 450 aaPredicted RBP16.12■□□□□ 0.17
TPT1-201ENST00000309246 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
TPT1-201ENST00000309246 ZNF541Q9H0D2 1346 aa16.12■□□□□ 0.17
TPT1-201ENST00000309246 MYL6BP14649 208 aa16.11■□□□□ 0.17
TPT1-201ENST00000309246 TTLL7Q6ZT98 887 aa16.11■□□□□ 0.17
TPT1-201ENST00000309246 MAP3K15Q6ZN16 1313 aa16.11■□□□□ 0.17
TPT1-201ENST00000309246 ANKRD36CQ5JPF3 1778 aa16.1■□□□□ 0.17
TPT1-201ENST00000309246 ERVV-1B6SEH8 477 aa16.1■□□□□ 0.17
TPT1-201ENST00000309246 GPTP24298 496 aa16.1■□□□□ 0.17
TPT1-201ENST00000309246 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
TPT1-201ENST00000309246 ZBTB3Q9H5J0 574 aa16.1■□□□□ 0.17
TPT1-201ENST00000309246 MAPK8IP3Q9UPT6 1336 aa16.1■□□□□ 0.17
TPT1-201ENST00000309246 ADAMTSL1Q8N6G6 1762 aa16.09■□□□□ 0.17
TPT1-201ENST00000309246 IQCA1LA6NCM1 817 aa16.09■□□□□ 0.17
TPT1-201ENST00000309246 HSPA1AP0DMV8 641 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms