RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 GLRX3O76003 335 aaKnown RBP13.25□□□□□ -0.29
PTPN7-201ENST00000309017 ANO6Q4KMQ2 910 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 HSP90AB4PQ58FF6 505 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 SPATA32Q96LK8 384 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 TTC14Q96N46 770 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 DACT1Q9NYF0 836 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 TNNT1P13805 278 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 HDGFP51858 240 aaKnown RBP13.25□□□□□ -0.29
PTPN7-201ENST00000309017 LRMPQ12912 555 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 CCDC112Q8NEF3 446 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 GTPBP4Q9BZE4 634 aaKnown RBP13.24□□□□□ -0.29
PTPN7-201ENST00000309017 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
PTPN7-201ENST00000309017 CRB1P82279 1406 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 METP08581 1390 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 GOLGA6L19H0YKK7 550 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 TAF7Q15545 349 aaPredicted RBP13.24□□□□□ -0.29
PTPN7-201ENST00000309017 UTP14CQ5TAP6 766 aaKnown RBP13.24□□□□□ -0.29
PTPN7-201ENST00000309017 SSH3Q8TE77 659 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 EYA1Q99502 592 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 HYPKQ9NX55 129 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 LIG1P18858 919 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 FGD1P98174 961 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 PTH1RQ03431 593 aa13.24□□□□□ -0.29
PTPN7-201ENST00000309017 C9orf78Q9NZ63 289 aaPredicted RBP13.24□□□□□ -0.29
PTPN7-201ENST00000309017 PDCP20941 246 aa13.23□□□□□ -0.29
PTPN7-201ENST00000309017 TTC6Q86TZ1 520 aa13.23□□□□□ -0.29
PTPN7-201ENST00000309017 PI4K2BQ8TCG2 481 aa13.23□□□□□ -0.29
PTPN7-201ENST00000309017 ANXA1P04083 346 aa13.23□□□□□ -0.29
PTPN7-201ENST00000309017 NBPF7P0C2Y1 421 aaPredicted RBP13.23□□□□□ -0.29
PTPN7-201ENST00000309017 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
PTPN7-201ENST00000309017 CEBPZQ03701 1054 aaKnown RBP13.23□□□□□ -0.29
PTPN7-201ENST00000309017 ME3Q16798 604 aa13.23□□□□□ -0.29
PTPN7-201ENST00000309017 VPS53Q5VIR6 699 aa13.23□□□□□ -0.29
PTPN7-201ENST00000309017 TMEM131LA2VDJ0 1609 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 CDC37L1Q7L3B6 337 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 HSP90B1P14625 803 aaKnown RBP13.22□□□□□ -0.29
PTPN7-201ENST00000309017 FOSBP53539 338 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 PI4KAP2A4QPH2 592 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 H3BQV1 296 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 ZNF165P49910 485 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 NLRP6P59044 892 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 BLOC1S2Q6QNY1 142 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 PI4KAP1Q8N8J0 262 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 CLIP2Q9UDT6 1046 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 NRBP1Q9UHY1 535 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
PTPN7-201ENST00000309017 AACSQ86V21 672 aa13.21□□□□□ -0.29
PTPN7-201ENST00000309017 FBXW7Q969H0 707 aa13.21□□□□□ -0.29
PTPN7-201ENST00000309017 CBX8Q9HC52 389 aa13.21□□□□□ -0.29
PTPN7-201ENST00000309017 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.29
PTPN7-201ENST00000309017 BECN2A8MW95 431 aa13.21□□□□□ -0.29
PTPN7-201ENST00000309017 PSMA5P28066 241 aa13.21□□□□□ -0.29
PTPN7-201ENST00000309017 FUCA2Q9BTY2 467 aa13.21□□□□□ -0.29
PTPN7-201ENST00000309017 DNAJC25Q9H1X3 360 aa13.21□□□□□ -0.29
PTPN7-201ENST00000309017 NAP1L2Q9ULW6 460 aaPredicted RBP13.21□□□□□ -0.29
PTPN7-201ENST00000309017 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.3
PTPN7-201ENST00000309017 ECHDC1Q9NTX5 307 aa13.21□□□□□ -0.3
PTPN7-201ENST00000309017 MRVI1Q9Y6F6 885 aa13.21□□□□□ -0.3
PTPN7-201ENST00000309017 RNF20Q5VTR2 975 aa13.2□□□□□ -0.3
PTPN7-201ENST00000309017 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
PTPN7-201ENST00000309017 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
PTPN7-201ENST00000309017 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
PTPN7-201ENST00000309017 DNAAF4Q8WXU2 420 aa13.2□□□□□ -0.3
PTPN7-201ENST00000309017 HTATSF1O43719 755 aaKnown RBP13.2□□□□□ -0.3
PTPN7-201ENST00000309017 PA2G4Q9UQ80 394 aaKnown RBP13.2□□□□□ -0.3
PTPN7-201ENST00000309017 NPHP1O15259 732 aa13.19□□□□□ -0.3
PTPN7-201ENST00000309017 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
PTPN7-201ENST00000309017 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
PTPN7-201ENST00000309017 CREB3L3Q68CJ9 461 aa13.19□□□□□ -0.3
PTPN7-201ENST00000309017 DDX19AQ9NUU7 478 aaKnown RBP13.19□□□□□ -0.3
PTPN7-201ENST00000309017 KIF20AO95235 890 aa13.19□□□□□ -0.3
PTPN7-201ENST00000309017 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
PTPN7-201ENST00000309017 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 DDX11Q96FC9 970 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 CCDC8Q9H0W5 538 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-201ENST00000309017 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTPN7-201ENST00000309017 V9GYY5 206 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-201ENST00000309017 ZNF75DP51815 510 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 NAA30Q147X3 362 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-201ENST00000309017 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 SIL1Q9H173 461 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 CCDC171Q6TFL3 1326 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 ARHGEF10O15013 1369 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 FLT4P35916 1363 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 NEO1Q92859 1461 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 G3BP1Q13283 466 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTPN7-201ENST00000309017 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
PTPN7-201ENST00000309017 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
PTPN7-201ENST00000309017 IL17REQ8NFR9 667 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
PTPN7-201ENST00000309017 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
PTPN7-201ENST00000309017 NPHP3Q7Z494 1330 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms