RNA–Protein interactions for RNA: ENST00000304672.5

PTCRA-201, Transcript of pre T cell antigen receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCRA, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-201ENST00000304672 PRPF40BQ6NWY9 871 aaKnown RBP25.22■■□□□ 1.63
PTCRA-201ENST00000304672 DZIP3Q86Y13 1208 aaKnown RBP25.22■■□□□ 1.63
PTCRA-201ENST00000304672 PHACTR3Q96KR7 559 aa25.22■■□□□ 1.63
PTCRA-201ENST00000304672 NPHP1O15259 732 aa25.21■■□□□ 1.63
PTCRA-201ENST00000304672 DDNO94850 711 aaPredicted RBP25.21■■□□□ 1.63
PTCRA-201ENST00000304672 POTEIP0CG38 1075 aa25.21■■□□□ 1.63
PTCRA-201ENST00000304672 POTEJP0CG39 1038 aa25.21■■□□□ 1.63
PTCRA-201ENST00000304672 PIP4K2AP48426 406 aaPredicted RBP25.21■■□□□ 1.63
PTCRA-201ENST00000304672 ST5P78524 1137 aa25.21■■□□□ 1.63
PTCRA-201ENST00000304672 STYK1Q6J9G0 422 aa25.21■■□□□ 1.63
PTCRA-201ENST00000304672 NPM2Q86SE8 214 aaKnown RBP25.21■■□□□ 1.63
PTCRA-201ENST00000304672 CNKSR1Q969H4 720 aa25.21■■□□□ 1.63
PTCRA-201ENST00000304672 BTBD11A6QL63 1104 aa25.2■■□□□ 1.62
PTCRA-201ENST00000304672 USP16Q9Y5T5 823 aa25.2■■□□□ 1.62
PTCRA-201ENST00000304672 CHADLQ6NUI6 762 aa25.19■■□□□ 1.62
PTCRA-201ENST00000304672 MASTLQ96GX5 879 aa25.19■■□□□ 1.62
PTCRA-201ENST00000304672 PRAMEF22A3QJZ6 481 aa25.18■■□□□ 1.62
PTCRA-201ENST00000304672 PRKAR2BP31323 418 aa25.18■■□□□ 1.62
PTCRA-201ENST00000304672 RSPH6AQ9H0K4 717 aa25.17■■□□□ 1.62
PTCRA-201ENST00000304672 SOGA3Q5TF21 947 aa25.15■■□□□ 1.62
PTCRA-201ENST00000304672 C7orf43Q8WVR3 580 aa25.15■■□□□ 1.62
PTCRA-201ENST00000304672 CREBZFQ9NS37 354 aa25.15■■□□□ 1.62
PTCRA-201ENST00000304672 NBPF5PQ86XG9 351 aaPredicted RBP25.14■■□□□ 1.62
PTCRA-201ENST00000304672 MKRN1Q9UHC7 482 aaKnown RBP25.14■■□□□ 1.62
PTCRA-201ENST00000304672 CLEC4GQ6UXB4 293 aa25.13■■□□□ 1.61
PTCRA-201ENST00000304672 SCN4AP35499 1836 aa25.12■■□□□ 1.61
PTCRA-201ENST00000304672 MCM10Q7L590 875 aa25.12■■□□□ 1.61
PTCRA-201ENST00000304672 CCDC93Q567U6 631 aa25.11■■□□□ 1.61
PTCRA-201ENST00000304672 SNRPA1P09661 255 aaKnown RBP25.1■■□□□ 1.61
PTCRA-201ENST00000304672 NPR1P16066 1061 aa25.1■■□□□ 1.61
PTCRA-201ENST00000304672 OLFM4Q6UX06 510 aa25.1■■□□□ 1.61
PTCRA-201ENST00000304672 L3MBTL3Q96JM7 780 aaPredicted RBP25.1■■□□□ 1.61
PTCRA-201ENST00000304672 CFAP53Q96M91 514 aa25.1■■□□□ 1.61
PTCRA-201ENST00000304672 ZNF652Q9Y2D9 606 aa25.1■■□□□ 1.61
PTCRA-201ENST00000304672 KLRG2A4D1S0 409 aaPredicted RBP25.09■■□□□ 1.61
PTCRA-201ENST00000304672 IQCA1LA6NCM1 817 aa25.09■■□□□ 1.61
PTCRA-201ENST00000304672 NBPF26B4DH59 902 aa25.09■■□□□ 1.61
PTCRA-201ENST00000304672 NBPF10Q6P3W6 841 aaKnown RBP25.09■■□□□ 1.61
PTCRA-201ENST00000304672 NBPF15Q8N660 670 aa25.09■■□□□ 1.61
PTCRA-201ENST00000304672 TAF1DQ9H5J8 278 aaPredicted RBP25.09■■□□□ 1.61
PTCRA-201ENST00000304672 PASKQ96RG2 1323 aa25.09■■□□□ 1.61
PTCRA-201ENST00000304672 ZNF541Q9H0D2 1346 aa25.09■■□□□ 1.61
PTCRA-201ENST00000304672 FKBP4Q02790 459 aaKnown RBP eCLIP25.08■■□□□ 1.61
PTCRA-201ENST00000304672 DCTN1Q14203 1278 aa25.08■■□□□ 1.61
PTCRA-201ENST00000304672 LDHDQ86WU2 507 aa25.08■■□□□ 1.61
PTCRA-201ENST00000304672 RTF1Q92541 710 aaKnown RBP25.08■■□□□ 1.61
PTCRA-201ENST00000304672 ZNF277Q9NRM2 450 aaPredicted RBP25.08■■□□□ 1.61
PTCRA-201ENST00000304672 NIP7Q9Y221 180 aaKnown RBP eCLIP25.08■■□□□ 1.61
PTCRA-201ENST00000304672 CNTNAP1P78357 1384 aa25.06■■□□□ 1.6
PTCRA-201ENST00000304672 FAM177BA6PVY3 158 aa25.06■■□□□ 1.6
PTCRA-201ENST00000304672 U2AF1L5P0DN76 240 aaPredicted RBP25.06■■□□□ 1.6
PTCRA-201ENST00000304672 U2AF1Q01081 240 aaKnown RBP eCLIP25.06■■□□□ 1.6
PTCRA-201ENST00000304672 TPTE2Q6XPS3 522 aa25.06■■□□□ 1.6
PTCRA-201ENST00000304672 NUDCQ9Y266 331 aa25.06■■□□□ 1.6
PTCRA-201ENST00000304672 LAMB4A4D0S4 1761 aa25.04■■□□□ 1.6
PTCRA-201ENST00000304672 ADAMTSL1Q8N6G6 1762 aa25.04■■□□□ 1.6
PTCRA-201ENST00000304672 HLFQ16534 295 aa25.04■■□□□ 1.6
PTCRA-201ENST00000304672 RGL2O15211 777 aa25.03■■□□□ 1.6
PTCRA-201ENST00000304672 FOXN1O15353 648 aa25.03■■□□□ 1.6
PTCRA-201ENST00000304672 EAPPQ56P03 285 aaPredicted RBP25.03■■□□□ 1.6
PTCRA-201ENST00000304672 ITGBL1O95965 494 aaPredicted RBP25.02■■□□□ 1.6
PTCRA-201ENST00000304672 PPP2R1AP30153 589 aa25.01■■□□□ 1.59
PTCRA-201ENST00000304672 RTKN2Q8IZC4 609 aa25.01■■□□□ 1.59
PTCRA-201ENST00000304672 HACL1Q9UJ83 578 aa25.01■■□□□ 1.59
PTCRA-201ENST00000304672 SNED1Q8TER0 1413 aa25■■□□□ 1.59
PTCRA-201ENST00000304672 TMEM88BA6NKF7 163 aa24.99■■□□□ 1.59
PTCRA-201ENST00000304672 HTATSF1O43719 755 aaKnown RBP24.99■■□□□ 1.59
PTCRA-201ENST00000304672 EPHX2P34913 555 aa24.99■■□□□ 1.59
PTCRA-201ENST00000304672 IARSP41252 1262 aaKnown RBP24.99■■□□□ 1.59
PTCRA-201ENST00000304672 VEGFBP49765 207 aa24.99■■□□□ 1.59
PTCRA-201ENST00000304672 RNF123Q5XPI4 1314 aa24.99■■□□□ 1.59
PTCRA-201ENST00000304672 SYNE4Q8N205 404 aa24.99■■□□□ 1.59
PTCRA-201ENST00000304672 ABCC12Q96J65 1359 aa24.99■■□□□ 1.59
PTCRA-201ENST00000304672 MIS18AQ9NYP9 233 aa24.99■■□□□ 1.59
PTCRA-201ENST00000304672 FZD9O00144 591 aa24.98■■□□□ 1.59
PTCRA-201ENST00000304672 ALDH1B1P30837 517 aa24.98■■□□□ 1.59
PTCRA-201ENST00000304672 TAF7Q15545 349 aaPredicted RBP24.98■■□□□ 1.59
PTCRA-201ENST00000304672 CLEC11AQ9Y240 323 aa24.98■■□□□ 1.59
PTCRA-201ENST00000304672 NUP98P52948 1817 aa24.98■■□□□ 1.59
PTCRA-201ENST00000304672 GTF2E1P29083 439 aaPredicted RBP24.97■■□□□ 1.59
PTCRA-201ENST00000304672 DLG5Q8TDM6 1919 aa24.96■■□□□ 1.59
PTCRA-201ENST00000304672 KDM3BQ7LBC6 1761 aa24.96■■□□□ 1.59
PTCRA-201ENST00000304672 CRY2Q49AN0 593 aa24.96■■□□□ 1.59
PTCRA-201ENST00000304672 NUTM1Q86Y26 1132 aa24.96■■□□□ 1.59
PTCRA-201ENST00000304672 NGEFQ8N5V2 710 aa24.96■■□□□ 1.59
PTCRA-201ENST00000304672 COL4A5P29400 1685 aa24.96■■□□□ 1.59
PTCRA-201ENST00000304672 MAP1SQ66K74 1059 aaPredicted RBP24.95■■□□□ 1.58
PTCRA-201ENST00000304672 PNMA8AQ86V59 439 aaPredicted RBP24.94■■□□□ 1.58
PTCRA-201ENST00000304672 GPC2Q8N158 579 aa24.94■■□□□ 1.58
PTCRA-201ENST00000304672 PSMD1Q99460 953 aa24.94■■□□□ 1.58
PTCRA-201ENST00000304672 PRDM10Q9NQV6 1147 aa24.94■■□□□ 1.58
PTCRA-201ENST00000304672 CNTROBQ8N137 903 aa24.93■■□□□ 1.58
PTCRA-201ENST00000304672 NYXQ9GZU5 481 aa24.93■■□□□ 1.58
PTCRA-201ENST00000304672 LTBP1Q14766 1721 aa24.92■■□□□ 1.58
PTCRA-201ENST00000304672 AIDAQ96BJ3 306 aa24.92■■□□□ 1.58
PTCRA-201ENST00000304672 MAP3K15Q6ZN16 1313 aa24.91■■□□□ 1.58
PTCRA-201ENST00000304672 ERVV-1B6SEH8 477 aa24.91■■□□□ 1.58
PTCRA-201ENST00000304672 CTCFP49711 727 aaPredicted RBP24.91■■□□□ 1.58
PTCRA-201ENST00000304672 TTLL7Q6ZT98 887 aa24.91■■□□□ 1.58
PTCRA-201ENST00000304672 SLC51AQ86UW1 340 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms