RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 ALS2Q96Q42 1657 aa16.87■□□□□ 0.29
CCT2-201ENST00000299300 FOXD4L5Q5VV16 416 aaPredicted RBP16.86■□□□□ 0.29
CCT2-201ENST00000299300 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
CCT2-201ENST00000299300 FOXD4L4Q8WXT5 416 aaPredicted RBP16.86■□□□□ 0.29
CCT2-201ENST00000299300 RBM33Q96EV2 1170 aaKnown RBP16.86■□□□□ 0.29
CCT2-201ENST00000299300 NPHP4O75161 1426 aaPredicted RBP16.86■□□□□ 0.29
CCT2-201ENST00000299300 ABCC6O95255 1503 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 C5P01031 1676 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 MRC1P22897 1456 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
CCT2-201ENST00000299300 RUFY3Q7L099 469 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 LINS1Q8NG48 757 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 RUFY2Q8WXA3 655 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 KAZALD1Q96I82 304 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
CCT2-201ENST00000299300 AK2P54819 239 aa16.85■□□□□ 0.29
CCT2-201ENST00000299300 ORAI2Q96SN7 254 aa16.85■□□□□ 0.29
CCT2-201ENST00000299300 DDX21Q9NR30 783 aaKnown RBP eCLIP16.85■□□□□ 0.29
CCT2-201ENST00000299300 LIMCH1Q9UPQ0 1083 aa16.85■□□□□ 0.29
CCT2-201ENST00000299300 SYCE3A1L190 88 aa16.84■□□□□ 0.29
CCT2-201ENST00000299300 PDIA6Q15084 440 aa16.84■□□□□ 0.29
CCT2-201ENST00000299300 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
CCT2-201ENST00000299300 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
CCT2-201ENST00000299300 CWC27Q6UX04 472 aaKnown RBP16.84■□□□□ 0.29
CCT2-201ENST00000299300 GRM8O00222 908 aa16.83■□□□□ 0.28
CCT2-201ENST00000299300 OS9Q13438 667 aaPredicted RBP16.83■□□□□ 0.28
CCT2-201ENST00000299300 EVI5LQ96CN4 794 aa16.83■□□□□ 0.28
CCT2-201ENST00000299300 AXIN2Q9Y2T1 843 aa16.83■□□□□ 0.28
CCT2-201ENST00000299300 ZBTB7CA1YPR0 619 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 PRAMEF22A3QJZ6 481 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 SYAP1Q96A49 352 aaPredicted RBP16.82■□□□□ 0.28
CCT2-201ENST00000299300 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 SUCLG2Q96I99 432 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 NAP1L5Q96NT1 182 aaPredicted RBP16.82■□□□□ 0.28
CCT2-201ENST00000299300 ZSWIM6Q9HCJ5 1215 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 DIAPH3Q9NSV4 1193 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 COL18A1P39060 1754 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 SASH1O94885 1247 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
CCT2-201ENST00000299300 PTH1RQ03431 593 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
CCT2-201ENST00000299300 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 USP48Q86UV5 1035 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 NOL7Q9UMY1 257 aaKnown RBP16.82■□□□□ 0.28
CCT2-201ENST00000299300 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
CCT2-201ENST00000299300 SPG7Q9UQ90 795 aa16.82■□□□□ 0.28
CCT2-201ENST00000299300 PLEKHG2Q9H7P9 1386 aa16.81■□□□□ 0.28
CCT2-201ENST00000299300 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
CCT2-201ENST00000299300 NECTIN1Q15223 517 aa16.81■□□□□ 0.28
CCT2-201ENST00000299300 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
CCT2-201ENST00000299300 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.81■□□□□ 0.28
CCT2-201ENST00000299300 GADD45BO75293 160 aaPredicted RBP16.8■□□□□ 0.28
CCT2-201ENST00000299300 IFIT2P09913 472 aaKnown RBP16.8■□□□□ 0.28
CCT2-201ENST00000299300 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
CCT2-201ENST00000299300 ZSCAN31Q96LW9 406 aaPredicted RBP16.8■□□□□ 0.28
CCT2-201ENST00000299300 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.8■□□□□ 0.28
CCT2-201ENST00000299300 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
CCT2-201ENST00000299300 ERBB3P21860 1342 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 CCDC171Q6TFL3 1326 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 HIP1O00291 1037 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 IGKV5-2P06315 115 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 SYT1P21579 422 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 KRT28Q7Z3Y7 464 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 JCADQ9P266 1359 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 STX6O43752 255 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 ZNF500O60304 480 aaPredicted RBP16.79■□□□□ 0.28
CCT2-201ENST00000299300 OFD1O75665 1012 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 AACSQ86V21 672 aa16.79■□□□□ 0.28
CCT2-201ENST00000299300 EAF2Q96CJ1 260 aaPredicted RBP16.79■□□□□ 0.28
CCT2-201ENST00000299300 BICC1Q9H694 974 aaKnown RBP16.79■□□□□ 0.28
CCT2-201ENST00000299300 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
CCT2-201ENST00000299300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.79■□□□□ 0.28
CCT2-201ENST00000299300 PHF14O94880 888 aa16.78■□□□□ 0.28
CCT2-201ENST00000299300 LARGE1O95461 756 aa16.78■□□□□ 0.28
CCT2-201ENST00000299300 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
CCT2-201ENST00000299300 MCM5P33992 734 aa16.78■□□□□ 0.28
CCT2-201ENST00000299300 XPCQ01831 940 aaPredicted RBP16.78■□□□□ 0.28
CCT2-201ENST00000299300 LARP1Q6PKG0 1096 aaKnown RBP16.78■□□□□ 0.28
CCT2-201ENST00000299300 MAP4K1Q92918 833 aa16.78■□□□□ 0.28
CCT2-201ENST00000299300 COL15A1P39059 1388 aa16.78■□□□□ 0.28
CCT2-201ENST00000299300 F13A1P00488 732 aa16.77■□□□□ 0.28
CCT2-201ENST00000299300 ADCK5Q3MIX3 580 aa16.77■□□□□ 0.28
CCT2-201ENST00000299300 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.28
CCT2-201ENST00000299300 ST3GAL1Q11201 340 aa16.77■□□□□ 0.27
CCT2-201ENST00000299300 G3BP1Q13283 466 aaKnown RBP eCLIP16.77■□□□□ 0.271e-6■■■□□ 15.6
CCT2-201ENST00000299300 PRPF40BQ6NWY9 871 aaKnown RBP16.77■□□□□ 0.27
CCT2-201ENST00000299300 ZNF790Q6PG37 636 aa16.77■□□□□ 0.27
CCT2-201ENST00000299300 LRP10Q7Z4F1 713 aa16.77■□□□□ 0.27
CCT2-201ENST00000299300 ALDH8A1Q9H2A2 487 aaPredicted RBP16.77■□□□□ 0.27
CCT2-201ENST00000299300 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.27
CCT2-201ENST00000299300 GDPD2Q9HCC8 539 aa16.77■□□□□ 0.27
CCT2-201ENST00000299300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.271e-6■■■□□ 15.5
CCT2-201ENST00000299300 SMC3Q9UQE7 1217 aa16.77■□□□□ 0.27
CCT2-201ENST00000299300 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
CCT2-201ENST00000299300 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
CCT2-201ENST00000299300 MSNP26038 577 aaKnown RBP16.76■□□□□ 0.27
CCT2-201ENST00000299300 UVSSAQ2YD98 709 aa16.76■□□□□ 0.27
CCT2-201ENST00000299300 JAKMIP1Q96N16 626 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms