RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 CCDC148Q8NFR7 591 aa17.93■□□□□ 0.46
FNDC1-201ENST00000297267 IFIT5Q13325 482 aaKnown RBP17.93■□□□□ 0.46
FNDC1-201ENST00000297267 TMCO3Q6UWJ1 677 aa17.93■□□□□ 0.46
FNDC1-201ENST00000297267 RPAP2Q8IXW5 612 aaPredicted RBP17.93■□□□□ 0.46
FNDC1-201ENST00000297267 BAG4O95429 457 aaKnown RBP17.93■□□□□ 0.46
FNDC1-201ENST00000297267 FLIIQ13045 1269 aa17.93■□□□□ 0.46
FNDC1-201ENST00000297267 THEMISQ8N1K5 641 aaPredicted RBP17.93■□□□□ 0.46
FNDC1-201ENST00000297267 DYDC1Q8WWB3 177 aa17.93■□□□□ 0.46
FNDC1-201ENST00000297267 GPATCH11Q8N954 259 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 CTNNA3Q9UI47 895 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 PTGS1P23219 599 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 TAF4BQ92750 862 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
FNDC1-201ENST00000297267 STARD3NLO95772 234 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 SFPQP23246 707 aaKnown RBP eCLIP17.92■□□□□ 0.46
FNDC1-201ENST00000297267 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 RGS22Q8NE09 1264 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 TMEM67Q5HYA8 995 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 ANKLE2Q86XL3 938 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 CABLES1Q8TDN4 633 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 STX6O43752 255 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 FAM135AQ9P2D6 1515 aa17.92■□□□□ 0.46
FNDC1-201ENST00000297267 NEBLO76041 1014 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 USP48Q86UV5 1035 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 USP16Q9Y5T5 823 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 MYO1BO43795 1136 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 GLRX3O76003 335 aaKnown RBP17.91■□□□□ 0.46
FNDC1-201ENST00000297267 SDSP20132 328 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 NOS1P29475 1434 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 ANO6Q4KMQ2 910 aa17.91■□□□□ 0.46
FNDC1-201ENST00000297267 SPA17Q15506 151 aa17.9■□□□□ 0.46
FNDC1-201ENST00000297267 LRRC59Q96AG4 307 aaKnown RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 ZNF444Q8N0Y2 327 aaPredicted RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 ZNF397Q8NF99 534 aaPredicted RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 CCDC97Q96F63 343 aaPredicted RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 SF3B2Q13435 895 aaKnown RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 TTLL12Q14166 644 aaPredicted RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 LIMCH1Q9UPQ0 1083 aa17.9■□□□□ 0.46
FNDC1-201ENST00000297267 GBP2P32456 591 aaPredicted RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 TCERG1LQ5VWI1 586 aa17.9■□□□□ 0.46
FNDC1-201ENST00000297267 PUF60Q9UHX1 559 aaKnown RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
FNDC1-201ENST00000297267 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
FNDC1-201ENST00000297267 ERLIN1O75477 346 aa17.9■□□□□ 0.46
FNDC1-201ENST00000297267 TMCO5BA8MYB1 307 aa17.89■□□□□ 0.46
FNDC1-201ENST00000297267 PICALMQ13492 652 aa17.89■□□□□ 0.46
FNDC1-201ENST00000297267 BMP2KQ9NSY1 1161 aaPredicted RBP17.89■□□□□ 0.46
FNDC1-201ENST00000297267 TMEM110-MUSTN1A8MSY1 372 aa17.89■□□□□ 0.45
FNDC1-201ENST00000297267 TTC22Q5TAA0 569 aa17.89■□□□□ 0.45
FNDC1-201ENST00000297267 C8orf58Q8NAV2 365 aa17.89■□□□□ 0.45
FNDC1-201ENST00000297267 MTERF4Q7Z6M4 381 aaKnown RBP17.89■□□□□ 0.45
FNDC1-201ENST00000297267 EIF3JO75822 258 aaKnown RBP17.89■□□□□ 0.45
FNDC1-201ENST00000297267 ARID5AQ03989 594 aa17.89■□□□□ 0.45
FNDC1-201ENST00000297267 ZKSCAN3Q9BRR0 538 aa17.89■□□□□ 0.45
FNDC1-201ENST00000297267 TOP2BQ02880 1626 aa17.89■□□□□ 0.45
FNDC1-201ENST00000297267 ZGPATQ8N5A5 531 aaKnown RBP17.88■□□□□ 0.45
FNDC1-201ENST00000297267 ANO10Q9NW15 660 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 KIF5CO60282 957 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 TMX3Q96JJ7 454 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 MAP2K1Q02750 393 aaPredicted RBP17.88■□□□□ 0.45
FNDC1-201ENST00000297267 GRM1Q13255 1194 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 KRT32Q14532 448 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 IPO4Q8TEX9 1081 aaKnown RBP17.88■□□□□ 0.45
FNDC1-201ENST00000297267 LRPPRCP42704 1394 aaKnown RBP17.88■□□□□ 0.45
FNDC1-201ENST00000297267 C6orf229H3BNL8 230 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 IDEP14735 1019 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 DNM1Q05193 864 aaKnown RBP17.88■□□□□ 0.45
FNDC1-201ENST00000297267 HELBQ8NG08 1087 aaPredicted RBP17.88■□□□□ 0.45
FNDC1-201ENST00000297267 PODXL2Q9NZ53 605 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 CEP131Q9UPN4 1083 aa17.88■□□□□ 0.45
FNDC1-201ENST00000297267 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
FNDC1-201ENST00000297267 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.45
FNDC1-201ENST00000297267 MTIF2P46199 727 aaKnown RBP17.87■□□□□ 0.45
FNDC1-201ENST00000297267 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
FNDC1-201ENST00000297267 PAXIP1Q6ZW49 1069 aaPredicted RBP17.87■□□□□ 0.45
FNDC1-201ENST00000297267 TSPYL6Q8N831 410 aa17.87■□□□□ 0.45
FNDC1-201ENST00000297267 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
FNDC1-201ENST00000297267 ABCC5O15440 1437 aa17.87■□□□□ 0.45
FNDC1-201ENST00000297267 Q6ZUG5 572 aa17.87■□□□□ 0.45
FNDC1-201ENST00000297267 TOPBP1Q92547 1522 aa17.87■□□□□ 0.45
FNDC1-201ENST00000297267 TROQ12816 1431 aaPredicted RBP17.87■□□□□ 0.45
FNDC1-201ENST00000297267 IFFO1Q0D2I5 559 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 PLS1Q14651 629 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 FKBP15Q5T1M5 1219 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 CRACR2AQ9BSW2 395 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 SAMM50Q9Y512 469 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 NOP2P46087 812 aaKnown RBP17.86■□□□□ 0.45
FNDC1-201ENST00000297267 KAT6BQ8WYB5 2073 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 GJC1P36383 396 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 PPM1FP49593 454 aaPredicted RBP17.86■□□□□ 0.45
FNDC1-201ENST00000297267 CAPZA3Q96KX2 299 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 TTC12Q9H892 705 aaPredicted RBP17.86■□□□□ 0.45
FNDC1-201ENST00000297267 SLC5A1P13866 664 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 METAP2P50579 478 aaKnown RBP eCLIP17.86■□□□□ 0.45
FNDC1-201ENST00000297267 LUZP1Q86V48 1076 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 JADE2Q9NQC1 790 aa17.86■□□□□ 0.45
FNDC1-201ENST00000297267 NDUFB9Q9Y6M9 179 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms