RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 TAOK3Q9H2K8 898 aa21.37■■□□□ 1.01
TMEM41A-201ENST00000296254 ZNF219Q9P2Y4 722 aaPredicted RBP21.37■■□□□ 1.01
TMEM41A-201ENST00000296254 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
TMEM41A-201ENST00000296254 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 U2AF1L5P0DN76 240 aaPredicted RBP21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 U2AF1Q01081 240 aaKnown RBP eCLIP21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 ERFEQ4G0M1 354 aa21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 PRPF40BQ6NWY9 871 aaKnown RBP21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 MCM10Q7L590 875 aa21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 RTF1Q92541 710 aaKnown RBP21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 SLX4Q8IY92 1834 aa21.36■■□□□ 1.01
TMEM41A-201ENST00000296254 CACNA1SQ13698 1873 aa21.35■■□□□ 1.01
TMEM41A-201ENST00000296254 POTECB2RU33 542 aa21.35■■□□□ 1.01
TMEM41A-201ENST00000296254 SNRPA1P09661 255 aaKnown RBP21.35■■□□□ 1.01
TMEM41A-201ENST00000296254 PPP2R1AP30153 589 aa21.35■■□□□ 1.01
TMEM41A-201ENST00000296254 DPY19L2Q6NUT2 758 aa21.35■■□□□ 1.01
TMEM41A-201ENST00000296254 CLEC4GQ6UXB4 293 aa21.35■■□□□ 1.01
TMEM41A-201ENST00000296254 MASTLQ96GX5 879 aa21.34■■□□□ 1.01
TMEM41A-201ENST00000296254 ZNF652Q9Y2D9 606 aa21.34■■□□□ 1.01
TMEM41A-201ENST00000296254 SOGA3Q5TF21 947 aa21.33■■□□□ 1.01
TMEM41A-201ENST00000296254 NBPF5PQ86XG9 351 aaPredicted RBP21.33■■□□□ 1.01
TMEM41A-201ENST00000296254 RGL2O15211 777 aa21.32■■□□□ 1
TMEM41A-201ENST00000296254 LAMB4A4D0S4 1761 aa21.32■■□□□ 1
TMEM41A-201ENST00000296254 HTATSF1O43719 755 aaKnown RBP21.31■■□□□ 1
TMEM41A-201ENST00000296254 DCTN1Q14203 1278 aa21.31■■□□□ 1
TMEM41A-201ENST00000296254 NBPF26B4DH59 902 aa21.3■■□□□ 1
TMEM41A-201ENST00000296254 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
TMEM41A-201ENST00000296254 NBPF15Q8N660 670 aa21.3■■□□□ 1
TMEM41A-201ENST00000296254 C7orf43Q8WVR3 580 aa21.29■■□□□ 1
TMEM41A-201ENST00000296254 KLRG2A4D1S0 409 aaPredicted RBP21.28■■□□□ 1
TMEM41A-201ENST00000296254 COL13A1Q5TAT6 717 aaPredicted RBP21.28■■□□□ 1
TMEM41A-201ENST00000296254 NIP7Q9Y221 180 aaKnown RBP eCLIP21.28■■□□□ 1
TMEM41A-201ENST00000296254 DDNO94850 711 aaPredicted RBP21.27■■□□□ 1
TMEM41A-201ENST00000296254 NPR1P16066 1061 aa21.27■■□□□ 1
TMEM41A-201ENST00000296254 CCDC93Q567U6 631 aa21.27■■□□□ 1
TMEM41A-201ENST00000296254 KDM3BQ7LBC6 1761 aa21.26■□□□□ 0.99
TMEM41A-201ENST00000296254 TPTE2Q6XPS3 522 aa21.26■□□□□ 0.99
TMEM41A-201ENST00000296254 TAF7Q15545 349 aaPredicted RBP21.25■□□□□ 0.99
TMEM41A-201ENST00000296254 CHADLQ6NUI6 762 aa21.25■□□□□ 0.99
TMEM41A-201ENST00000296254 POTEIP0CG38 1075 aa21.24■□□□□ 0.99
TMEM41A-201ENST00000296254 POTEJP0CG39 1038 aa21.24■□□□□ 0.99
TMEM41A-201ENST00000296254 L3MBTL3Q96JM7 780 aaPredicted RBP21.24■□□□□ 0.99
TMEM41A-201ENST00000296254 IQCA1LA6NCM1 817 aa21.23■□□□□ 0.99
TMEM41A-201ENST00000296254 HSPA1AP0DMV8 641 aaKnown RBP21.23■□□□□ 0.99
TMEM41A-201ENST00000296254 HSPA1BP0DMV9 641 aaKnown RBP21.23■□□□□ 0.99
TMEM41A-201ENST00000296254 FKBP4Q02790 459 aaKnown RBP eCLIP21.23■□□□□ 0.99
TMEM41A-201ENST00000296254 HLFQ16534 295 aa21.23■□□□□ 0.99
TMEM41A-201ENST00000296254 DLG5Q8TDM6 1919 aa21.22■□□□□ 0.99
TMEM41A-201ENST00000296254 CREBZFQ9NS37 354 aa21.22■□□□□ 0.99
TMEM41A-201ENST00000296254 MIS18AQ9NYP9 233 aa21.22■□□□□ 0.99
TMEM41A-201ENST00000296254 SCN4AP35499 1836 aa21.22■□□□□ 0.99
TMEM41A-201ENST00000296254 ABCC12Q96J65 1359 aa21.22■□□□□ 0.99
TMEM41A-201ENST00000296254 SNED1Q8TER0 1413 aa21.21■□□□□ 0.99
TMEM41A-201ENST00000296254 FAM177BA6PVY3 158 aa21.21■□□□□ 0.99
TMEM41A-201ENST00000296254 OLFM4Q6UX06 510 aa21.21■□□□□ 0.99
TMEM41A-201ENST00000296254 ZNF277Q9NRM2 450 aaPredicted RBP21.21■□□□□ 0.99
TMEM41A-201ENST00000296254 ZNF541Q9H0D2 1346 aa21.21■□□□□ 0.99
TMEM41A-201ENST00000296254 RTKN2Q8IZC4 609 aa21.2■□□□□ 0.98
TMEM41A-201ENST00000296254 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
TMEM41A-201ENST00000296254 TAF1DQ9H5J8 278 aaPredicted RBP21.2■□□□□ 0.98
TMEM41A-201ENST00000296254 NEFMP07197 916 aa21.19■□□□□ 0.98
TMEM41A-201ENST00000296254 CRY2Q49AN0 593 aa21.19■□□□□ 0.98
TMEM41A-201ENST00000296254 LDHDQ86WU2 507 aa21.19■□□□□ 0.98
TMEM41A-201ENST00000296254 IBTKQ9P2D0 1353 aaPredicted RBP21.19■□□□□ 0.98
TMEM41A-201ENST00000296254 RIC1Q4ADV7 1423 aa21.19■□□□□ 0.98
TMEM41A-201ENST00000296254 ERVV-1B6SEH8 477 aa21.18■□□□□ 0.98
TMEM41A-201ENST00000296254 ALDH1B1P30837 517 aa21.18■□□□□ 0.98
TMEM41A-201ENST00000296254 TNS4Q8IZW8 715 aa21.18■□□□□ 0.98
TMEM41A-201ENST00000296254 PLEKHF1Q96S99 279 aa21.18■□□□□ 0.98
TMEM41A-201ENST00000296254 NYXQ9GZU5 481 aa21.18■□□□□ 0.98
TMEM41A-201ENST00000296254 MAP3K15Q6ZN16 1313 aa21.18■□□□□ 0.98
TMEM41A-201ENST00000296254 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
TMEM41A-201ENST00000296254 EIF4A1P60842 406 aaKnown RBP21.17■□□□□ 0.98
TMEM41A-201ENST00000296254 PASKQ96RG2 1323 aa21.17■□□□□ 0.98
TMEM41A-201ENST00000296254 ADAMTSL1Q8N6G6 1762 aa21.17■□□□□ 0.98
TMEM41A-201ENST00000296254 NUP98P52948 1817 aa21.16■□□□□ 0.98
TMEM41A-201ENST00000296254 NFE2L2Q16236 605 aa21.16■□□□□ 0.98
TMEM41A-201ENST00000296254 NUTM1Q86Y26 1132 aa21.16■□□□□ 0.98
TMEM41A-201ENST00000296254 MKRN1Q9UHC7 482 aaKnown RBP21.16■□□□□ 0.98
TMEM41A-201ENST00000296254 UBN2Q6ZU65 1347 aa21.15■□□□□ 0.98
TMEM41A-201ENST00000296254 IARSP41252 1262 aaKnown RBP21.15■□□□□ 0.98
TMEM41A-201ENST00000296254 KIF6Q6ZMV9 814 aa21.15■□□□□ 0.98
TMEM41A-201ENST00000296254 TTLL7Q6ZT98 887 aa21.15■□□□□ 0.98
TMEM41A-201ENST00000296254 NGEFQ8N5V2 710 aa21.15■□□□□ 0.98
TMEM41A-201ENST00000296254 PSMD1Q99460 953 aa21.15■□□□□ 0.98
TMEM41A-201ENST00000296254 THUMPD2Q9BTF0 503 aaKnown RBP21.15■□□□□ 0.98
TMEM41A-201ENST00000296254 CNTNAP1P78357 1384 aa21.14■□□□□ 0.98
TMEM41A-201ENST00000296254 FZD9O00144 591 aa21.14■□□□□ 0.97
TMEM41A-201ENST00000296254 HACL1Q9UJ83 578 aa21.14■□□□□ 0.97
TMEM41A-201ENST00000296254 SYNE4Q8N205 404 aa21.13■□□□□ 0.97
TMEM41A-201ENST00000296254 RRP7AQ9Y3A4 280 aaKnown RBP21.13■□□□□ 0.97
TMEM41A-201ENST00000296254 COL4A5P29400 1685 aa21.12■□□□□ 0.97
TMEM41A-201ENST00000296254 ERBB4Q15303 1308 aa21.12■□□□□ 0.97
TMEM41A-201ENST00000296254 RNF123Q5XPI4 1314 aa21.12■□□□□ 0.97
TMEM41A-201ENST00000296254 MYL6BP14649 208 aa21.12■□□□□ 0.97
TMEM41A-201ENST00000296254 EPHX2P34913 555 aa21.12■□□□□ 0.97
TMEM41A-201ENST00000296254 EAPPQ56P03 285 aaPredicted RBP21.12■□□□□ 0.97
TMEM41A-201ENST00000296254 ZBTB3Q9H5J0 574 aa21.12■□□□□ 0.97
TMEM41A-201ENST00000296254 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms