RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 C19orf44Q9H6X5 657 aa21.51■■□□□ 1.03
SIM2-201ENST00000290399 PLEKHG3A1L390 1219 aa21.5■■□□□ 1.03
SIM2-201ENST00000290399 LMBR1LQ6UX01 489 aa21.5■■□□□ 1.03
SIM2-201ENST00000290399 SBNO1A3KN83 1393 aa21.5■■□□□ 1.03
SIM2-201ENST00000290399 RBM27Q9P2N5 1060 aaKnown RBP21.5■■□□□ 1.03
SIM2-201ENST00000290399 SOS1Q07889 1333 aaPredicted RBP21.5■■□□□ 1.03
SIM2-201ENST00000290399 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
SIM2-201ENST00000290399 CCT2P78371 535 aaKnown RBP21.5■■□□□ 1.03
SIM2-201ENST00000290399 SAMD1Q6SPF0 538 aaPredicted RBP21.5■■□□□ 1.03
SIM2-201ENST00000290399 EXOC5O00471 708 aa21.49■■□□□ 1.03
SIM2-201ENST00000290399 ANAPC15P60006 121 aa21.49■■□□□ 1.03
SIM2-201ENST00000290399 CCDC183Q5T5S1 534 aa21.49■■□□□ 1.03
SIM2-201ENST00000290399 NOC3LQ8WTT2 800 aaKnown RBP21.49■■□□□ 1.03
SIM2-201ENST00000290399 HMGB1P09429 215 aaKnown RBP21.49■■□□□ 1.03
SIM2-201ENST00000290399 ZCRB1Q8TBF4 217 aaKnown RBP21.49■■□□□ 1.03
SIM2-201ENST00000290399 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
SIM2-201ENST00000290399 ORAI2Q96SN7 254 aa21.49■■□□□ 1.03
SIM2-201ENST00000290399 PPFIA3O75145 1194 aa21.48■■□□□ 1.03
SIM2-201ENST00000290399 HSP90AB3PQ58FF7 597 aa21.48■■□□□ 1.03
SIM2-201ENST00000290399 VSIG10Q8N0Z9 540 aa21.48■■□□□ 1.03
SIM2-201ENST00000290399 NECAB1Q8N987 351 aa21.48■■□□□ 1.03
SIM2-201ENST00000290399 ERCC6L2Q5T890 1561 aa21.48■■□□□ 1.03
SIM2-201ENST00000290399 ANKRD18BA2A2Z9 1011 aa21.47■■□□□ 1.03
SIM2-201ENST00000290399 FILIP1Q7Z7B0 1213 aa21.47■■□□□ 1.03
SIM2-201ENST00000290399 USP26Q9BXU7 913 aa21.47■■□□□ 1.03
SIM2-201ENST00000290399 NAPBQ9H115 298 aa21.47■■□□□ 1.03
SIM2-201ENST00000290399 RBM8AQ9Y5S9 174 aaKnown RBP21.47■■□□□ 1.03
SIM2-201ENST00000290399 CEP57L1Q8IYX8 460 aa21.47■■□□□ 1.03
SIM2-201ENST00000290399 NEK1Q96PY6 1258 aa21.47■■□□□ 1.03
SIM2-201ENST00000290399 LGR6Q9HBX8 967 aa21.47■■□□□ 1.03
SIM2-201ENST00000290399 ZNF213O14771 459 aa21.47■■□□□ 1.03
SIM2-201ENST00000290399 RNMTO43148 476 aaKnown RBP21.46■■□□□ 1.03
SIM2-201ENST00000290399 HAND2P61296 217 aa21.46■■□□□ 1.03
SIM2-201ENST00000290399 PLEKHF1Q96S99 279 aa21.46■■□□□ 1.03
SIM2-201ENST00000290399 CDC42BPAQ5VT25 1732 aa21.46■■□□□ 1.03
SIM2-201ENST00000290399 SERPINC1P01008 464 aa21.46■■□□□ 1.03
SIM2-201ENST00000290399 CHMLP26374 656 aa21.46■■□□□ 1.03
SIM2-201ENST00000290399 ZGPATQ8N5A5 531 aaKnown RBP21.46■■□□□ 1.03
SIM2-201ENST00000290399 GOLGA6L1Q8N7Z2 621 aa21.46■■□□□ 1.03
SIM2-201ENST00000290399 MNS1Q8NEH6 495 aa21.46■■□□□ 1.03
SIM2-201ENST00000290399 HMGN5P82970 282 aaKnown RBP21.46■■□□□ 1.03
SIM2-201ENST00000290399 MINDY4BA8MYZ0 360 aa21.45■■□□□ 1.03
SIM2-201ENST00000290399 PLXNC1O60486 1568 aa21.45■■□□□ 1.02
SIM2-201ENST00000290399 MYOM2P54296 1465 aa21.45■■□□□ 1.02
SIM2-201ENST00000290399 RBM25P49756 843 aaKnown RBP21.45■■□□□ 1.02
SIM2-201ENST00000290399 C8orf76Q96K31 380 aa21.45■■□□□ 1.02
SIM2-201ENST00000290399 TEX13AQ9BXU3 409 aaPredicted RBP21.45■■□□□ 1.02
SIM2-201ENST00000290399 CKAP2LQ8IYA6 745 aa21.45■■□□□ 1.02
SIM2-201ENST00000290399 CCDC82Q8N4S0 544 aa21.45■■□□□ 1.02
SIM2-201ENST00000290399 BRPF1P55201 1214 aaPredicted RBP21.44■■□□□ 1.02
SIM2-201ENST00000290399 MAP3K12Q12852 859 aa21.44■■□□□ 1.02
SIM2-201ENST00000290399 USP25Q9UHP3 1055 aa21.44■■□□□ 1.02
SIM2-201ENST00000290399 PRDM15P57071 1507 aaPredicted RBP21.44■■□□□ 1.02
SIM2-201ENST00000290399 XRCC6P12956 609 aaKnown RBP eCLIP21.44■■□□□ 1.02
SIM2-201ENST00000290399 MLH3Q9UHC1 1453 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 BRF1Q92994 677 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 ANO8Q9HCE9 1232 aaPredicted RBP21.43■■□□□ 1.02
SIM2-201ENST00000290399 ZNF652Q9Y2D9 606 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 A0A0U1RQG5 324 aaPredicted RBP21.43■■□□□ 1.02
SIM2-201ENST00000290399 TXLNAP40222 546 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 RBM10P98175 930 aaKnown RBP21.43■■□□□ 1.02
SIM2-201ENST00000290399 PANK2Q9BZ23 570 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 DDX21Q9NR30 783 aaKnown RBP eCLIP21.43■■□□□ 1.02
SIM2-201ENST00000290399 HMG20BQ9P0W2 317 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 RAB3GAP1Q15042 981 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 PIBF1Q8WXW3 757 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 LRRC2Q9BYS8 371 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 METP08581 1390 aa21.43■■□□□ 1.02
SIM2-201ENST00000290399 PNMA6EA0A0J9YXQ4 647 aa21.42■■□□□ 1.02
SIM2-201ENST00000290399 PDE4CQ08493 712 aa21.42■■□□□ 1.02
SIM2-201ENST00000290399 IKQ13123 557 aaPredicted RBP21.42■■□□□ 1.02
SIM2-201ENST00000290399 NBPF6Q5VWK0 638 aa21.42■■□□□ 1.02
SIM2-201ENST00000290399 NBPF4Q96M43 638 aa21.42■■□□□ 1.02
SIM2-201ENST00000290399 USP19O94966 1318 aa21.42■■□□□ 1.02
SIM2-201ENST00000290399 SYNMO15061 1565 aa21.41■■□□□ 1.02
SIM2-201ENST00000290399 GOLGA8BA8MQT2 603 aa21.41■■□□□ 1.02
SIM2-201ENST00000290399 ZSCAN23Q3MJ62 389 aa21.41■■□□□ 1.02
SIM2-201ENST00000290399 SIRT1Q96EB6 747 aa21.41■■□□□ 1.02
SIM2-201ENST00000290399 ZSCAN22P10073 491 aaPredicted RBP21.41■■□□□ 1.02
SIM2-201ENST00000290399 TTC41PQ6P2S7 1318 aa21.41■■□□□ 1.02
SIM2-201ENST00000290399 ZCCHC11Q5TAX3 1644 aaKnown RBP21.41■■□□□ 1.02
SIM2-201ENST00000290399 CHD1O14646 1710 aa21.4■■□□□ 1.02
SIM2-201ENST00000290399 HSPA2P54652 639 aa21.4■■□□□ 1.02
SIM2-201ENST00000290399 ATP2B2Q01814 1243 aa21.4■■□□□ 1.02
SIM2-201ENST00000290399 SLC5A1P13866 664 aa21.4■■□□□ 1.02
SIM2-201ENST00000290399 NMIQ13287 307 aaPredicted RBP21.39■■□□□ 1.02
SIM2-201ENST00000290399 DCAF5Q96JK2 942 aa21.39■■□□□ 1.02
SIM2-201ENST00000290399 NBPF7P0C2Y1 421 aaPredicted RBP21.39■■□□□ 1.01
SIM2-201ENST00000290399 UBE2HP62256 183 aa21.39■■□□□ 1.01
SIM2-201ENST00000290399 FILIP1LQ4L180 1135 aa21.39■■□□□ 1.01
SIM2-201ENST00000290399 CAVIN4Q5BKX8 364 aa21.39■■□□□ 1.01
SIM2-201ENST00000290399 RAB11FIP4Q86YS3 637 aa21.39■■□□□ 1.01
SIM2-201ENST00000290399 BABAM1Q9NWV8 329 aa21.39■■□□□ 1.01
SIM2-201ENST00000290399 BCORL1Q5H9F3 1711 aa21.39■■□□□ 1.01
SIM2-201ENST00000290399 TTLL5Q6EMB2 1281 aa21.39■■□□□ 1.01
SIM2-201ENST00000290399 BICC1Q9H694 974 aaKnown RBP21.39■■□□□ 1.01
SIM2-201ENST00000290399 WASF1Q92558 559 aa21.38■■□□□ 1.01
SIM2-201ENST00000290399 USP16Q9Y5T5 823 aa21.38■■□□□ 1.01
SIM2-201ENST00000290399 ABCC4O15439 1325 aa21.38■■□□□ 1.01
SIM2-201ENST00000290399 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms