RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
TMEM47-201ENST00000275954 SNX21Q969T3 373 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 CEP152O94986 1710 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 ZPR1O75312 459 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 TRMT112Q9UI30 125 aaKnown RBP17.01■□□□□ 0.31
TMEM47-201ENST00000275954 USP19O94966 1318 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 MYOM2P54296 1465 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 GRM8O00222 908 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 IL17REQ8NFR9 667 aa17.01■□□□□ 0.31
TMEM47-201ENST00000275954 ME1P48163 572 aa17■□□□□ 0.31
TMEM47-201ENST00000275954 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
TMEM47-201ENST00000275954 GOLIM4O00461 696 aa17■□□□□ 0.31
TMEM47-201ENST00000275954 KSR2Q6VAB6 950 aa17■□□□□ 0.31
TMEM47-201ENST00000275954 CLTCL1P53675 1640 aa17■□□□□ 0.31
TMEM47-201ENST00000275954 IFIT1P09914 478 aaKnown RBP17■□□□□ 0.31
TMEM47-201ENST00000275954 ANKRD1Q15327 319 aa17■□□□□ 0.31
TMEM47-201ENST00000275954 QTRT2Q9H974 415 aaKnown RBP17■□□□□ 0.31
TMEM47-201ENST00000275954 MAP3K5Q99683 1374 aa17■□□□□ 0.31
TMEM47-201ENST00000275954 ABCA6Q8N139 1617 aa17■□□□□ 0.31
TMEM47-201ENST00000275954 SYNMO15061 1565 aa16.99■□□□□ 0.31
TMEM47-201ENST00000275954 ARAP3Q8WWN8 1544 aa16.99■□□□□ 0.31
TMEM47-201ENST00000275954 SPATA32Q96LK8 384 aa16.99■□□□□ 0.31
TMEM47-201ENST00000275954 MPHOSPH8Q99549 860 aa16.99■□□□□ 0.31
TMEM47-201ENST00000275954 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
TMEM47-201ENST00000275954 CCDC34Q96HJ3 373 aa16.99■□□□□ 0.31
TMEM47-201ENST00000275954 ERICH2A1L162 156 aa16.99■□□□□ 0.31
TMEM47-201ENST00000275954 GSPT1P15170 499 aaKnown RBP16.99■□□□□ 0.31
TMEM47-201ENST00000275954 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
TMEM47-201ENST00000275954 SIRT1Q96EB6 747 aa16.99■□□□□ 0.31
TMEM47-201ENST00000275954 ZSCAN31Q96LW9 406 aaPredicted RBP16.99■□□□□ 0.31
TMEM47-201ENST00000275954 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
TMEM47-201ENST00000275954 RBM25P49756 843 aaKnown RBP16.98■□□□□ 0.31
TMEM47-201ENST00000275954 METTL24Q5JXM2 366 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 TNMDQ9H2S6 317 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 CCDC39Q9UFE4 941 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
TMEM47-201ENST00000275954 IQGAP3Q86VI3 1631 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 CHMLP26374 656 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 CCT2P78371 535 aaKnown RBP16.98■□□□□ 0.31
TMEM47-201ENST00000275954 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.98■□□□□ 0.31
TMEM47-201ENST00000275954 EVI5LQ96CN4 794 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 AK7Q96M32 723 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 KIDINS220Q9ULH0 1771 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 STK38Q15208 465 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 RAB11FIP4Q86YS3 637 aa16.98■□□□□ 0.31
TMEM47-201ENST00000275954 CLTCQ00610 1675 aaKnown RBP16.97■□□□□ 0.31
TMEM47-201ENST00000275954 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
TMEM47-201ENST00000275954 LMBR1LQ6UX01 489 aa16.97■□□□□ 0.31
TMEM47-201ENST00000275954 PTPRMP28827 1452 aa16.97■□□□□ 0.31
TMEM47-201ENST00000275954 HAND2P61296 217 aa16.97■□□□□ 0.31
TMEM47-201ENST00000275954 RBM10P98175 930 aaKnown RBP16.97■□□□□ 0.31
TMEM47-201ENST00000275954 TFCP2L1Q9NZI6 479 aa16.97■□□□□ 0.31
TMEM47-201ENST00000275954 GJB2P29033 226 aa16.96■□□□□ 0.31
TMEM47-201ENST00000275954 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
TMEM47-201ENST00000275954 HSPA1LP34931 641 aa16.96■□□□□ 0.31
TMEM47-201ENST00000275954 KLHL40Q2TBA0 621 aa16.96■□□□□ 0.31
TMEM47-201ENST00000275954 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
TMEM47-201ENST00000275954 LINS1Q8NG48 757 aa16.96■□□□□ 0.31
TMEM47-201ENST00000275954 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
TMEM47-201ENST00000275954 ABCC4O15439 1325 aa16.96■□□□□ 0.31
TMEM47-201ENST00000275954 STX6O43752 255 aa16.96■□□□□ 0.3
TMEM47-201ENST00000275954 RAB3GAP1Q15042 981 aa16.96■□□□□ 0.3
TMEM47-201ENST00000275954 SAFBQ15424 915 aaKnown RBP eCLIP16.96■□□□□ 0.3
TMEM47-201ENST00000275954 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
TMEM47-201ENST00000275954 CCDC192P0DO97 292 aa16.95■□□□□ 0.3
TMEM47-201ENST00000275954 SIRT2Q8IXJ6 389 aa16.95■□□□□ 0.3
TMEM47-201ENST00000275954 CKAP2LQ8IYA6 745 aa16.95■□□□□ 0.3
TMEM47-201ENST00000275954 TPD52L1Q16890 204 aaPredicted RBP16.95■□□□□ 0.3
TMEM47-201ENST00000275954 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
TMEM47-201ENST00000275954 CCDC82Q8N4S0 544 aa16.95■□□□□ 0.3
TMEM47-201ENST00000275954 ABCF2Q9UG63 623 aa16.95■□□□□ 0.3
TMEM47-201ENST00000275954 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
TMEM47-201ENST00000275954 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
TMEM47-201ENST00000275954 RFC4P35249 363 aa16.94■□□□□ 0.3
TMEM47-201ENST00000275954 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
TMEM47-201ENST00000275954 MAP3K4Q9Y6R4 1608 aa16.94■□□□□ 0.3
TMEM47-201ENST00000275954 DHX16O60231 1041 aaKnown RBP16.94■□□□□ 0.3
TMEM47-201ENST00000275954 TRIM37O94972 964 aa16.94■□□□□ 0.3
TMEM47-201ENST00000275954 KRT32Q14532 448 aa16.94■□□□□ 0.3
TMEM47-201ENST00000275954 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
TMEM47-201ENST00000275954 CHAMP1Q96JM3 812 aa16.94■□□□□ 0.3
TMEM47-201ENST00000275954 USP25Q9UHP3 1055 aa16.94■□□□□ 0.3
TMEM47-201ENST00000275954 CCAR2Q8N163 923 aaKnown RBP16.94■□□□□ 0.3
TMEM47-201ENST00000275954 USP44Q9H0E7 712 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 NUP62CLQ9H1M0 184 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 NDUFB9Q9Y6M9 179 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 GNPATO15228 680 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 IFIT5Q13325 482 aaKnown RBP16.93■□□□□ 0.3
TMEM47-201ENST00000275954 ZSCAN23Q3MJ62 389 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 MSL1Q68DK7 614 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 NUP133Q8WUM0 1156 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 USP16Q9Y5T5 823 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
TMEM47-201ENST00000275954 HELBQ8NG08 1087 aaPredicted RBP16.93■□□□□ 0.3
TMEM47-201ENST00000275954 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMEM47-201ENST00000275954 BICC1Q9H694 974 aaKnown RBP16.93■□□□□ 0.3
TMEM47-201ENST00000275954 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
TMEM47-201ENST00000275954 JAG2Q9Y219 1238 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms