RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RNF123Q5XPI4 1314 aa26.44■■□□□ 1.82
RTCA-201ENST00000260563 TTLL7Q6ZT98 887 aa26.44■■□□□ 1.82
RTCA-201ENST00000260563 SSH1Q8WYL5 1049 aa26.44■■□□□ 1.82
RTCA-201ENST00000260563 SMC4Q9NTJ3 1288 aa26.44■■□□□ 1.82
RTCA-201ENST00000260563 SRP68Q9UHB9 627 aaKnown RBP26.44■■□□□ 1.82
RTCA-201ENST00000260563 BCAR3O75815 825 aa26.43■■□□□ 1.82
RTCA-201ENST00000260563 BCL2L13Q9BXK5 485 aa26.43■■□□□ 1.82
RTCA-201ENST00000260563 USPL1Q5W0Q7 1092 aa26.42■■□□□ 1.82
RTCA-201ENST00000260563 SLC16A10Q8TF71 515 aa26.42■■□□□ 1.82
RTCA-201ENST00000260563 MAP3K15Q6ZN16 1313 aa26.41■■□□□ 1.82
RTCA-201ENST00000260563 CAMTA2O94983 1202 aa26.41■■□□□ 1.82
RTCA-201ENST00000260563 RRP1P56182 461 aaKnown RBP26.4■■□□□ 1.82
RTCA-201ENST00000260563 FLIIQ13045 1269 aa26.4■■□□□ 1.82
RTCA-201ENST00000260563 MRPL50Q8N5N7 158 aaKnown RBP26.4■■□□□ 1.82
RTCA-201ENST00000260563 GYS1P13807 737 aa26.39■■□□□ 1.82
RTCA-201ENST00000260563 G2E3Q7L622 706 aa26.39■■□□□ 1.82
RTCA-201ENST00000260563 ZBTB3Q9H5J0 574 aa26.39■■□□□ 1.82
RTCA-201ENST00000260563 AFDNP55196 1824 aaKnown RBP26.39■■□□□ 1.82
RTCA-201ENST00000260563 DDX58O95786 925 aaKnown RBP26.39■■□□□ 1.81
RTCA-201ENST00000260563 ZNF652Q9Y2D9 606 aa26.39■■□□□ 1.81
RTCA-201ENST00000260563 ERVV-1B6SEH8 477 aa26.38■■□□□ 1.81
RTCA-201ENST00000260563 ZBTB7AO95365 584 aa26.37■■□□□ 1.81
RTCA-201ENST00000260563 FKBP5Q13451 457 aaPredicted RBP26.37■■□□□ 1.81
RTCA-201ENST00000260563 PLBD2Q8NHP8 589 aa26.37■■□□□ 1.81
RTCA-201ENST00000260563 MTFR1LQ9H019 292 aa26.37■■□□□ 1.81
RTCA-201ENST00000260563 RGL2O15211 777 aa26.36■■□□□ 1.81
RTCA-201ENST00000260563 MSL1Q68DK7 614 aa26.36■■□□□ 1.81
RTCA-201ENST00000260563 ANKRD13DQ6ZTN6 518 aa26.36■■□□□ 1.81
RTCA-201ENST00000260563 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.36■■□□□ 1.81
RTCA-201ENST00000260563 BCL2L12Q9HB09 334 aa26.36■■□□□ 1.81
RTCA-201ENST00000260563 KIF16BQ96L93 1317 aa26.36■■□□□ 1.81
RTCA-201ENST00000260563 CLEC4GQ6UXB4 293 aa26.35■■□□□ 1.81
RTCA-201ENST00000260563 RIC3Q7Z5B4 369 aa26.35■■□□□ 1.81
RTCA-201ENST00000260563 N4BP2Q86UW6 1770 aaPredicted RBP26.35■■□□□ 1.81
RTCA-201ENST00000260563 BRPF1P55201 1214 aaPredicted RBP26.34■■□□□ 1.81
RTCA-201ENST00000260563 FKBP8Q14318 412 aa26.34■■□□□ 1.81
RTCA-201ENST00000260563 HLFQ16534 295 aa26.34■■□□□ 1.81
RTCA-201ENST00000260563 NLGN1Q8N2Q7 840 aa26.34■■□□□ 1.81
RTCA-201ENST00000260563 PTPRCP08575 1304 aa26.34■■□□□ 1.81
RTCA-201ENST00000260563 ATP10DQ9P241 1426 aa26.34■■□□□ 1.81
RTCA-201ENST00000260563 GIGYF2Q6Y7W6 1299 aaKnown RBP26.34■■□□□ 1.81
RTCA-201ENST00000260563 ADCY9O60503 1353 aa26.33■■□□□ 1.81
RTCA-201ENST00000260563 PLIN1O60240 522 aa26.33■■□□□ 1.81
RTCA-201ENST00000260563 NEFLP07196 543 aa26.33■■□□□ 1.81
RTCA-201ENST00000260563 KSR2Q6VAB6 950 aa26.32■■□□□ 1.8
RTCA-201ENST00000260563 PI4KAP2A4QPH2 592 aa26.31■■□□□ 1.8
RTCA-201ENST00000260563 HSP90AB3PQ58FF7 597 aa26.31■■□□□ 1.8
RTCA-201ENST00000260563 PI4KAP1Q8N8J0 262 aa26.31■■□□□ 1.8
RTCA-201ENST00000260563 FRAT1Q92837 279 aaPredicted RBP26.31■■□□□ 1.8
RTCA-201ENST00000260563 MAP3K2Q9Y2U5 619 aa26.31■■□□□ 1.8
RTCA-201ENST00000260563 TBC1D9BQ66K14 1250 aa26.3■■□□□ 1.8
RTCA-201ENST00000260563 ATF5Q9Y2D1 282 aaPredicted RBP26.3■■□□□ 1.8
RTCA-201ENST00000260563 BICDL1Q6ZP65 573 aa26.29■■□□□ 1.8
RTCA-201ENST00000260563 NRXN2Q9P2S2 1712 aa26.29■■□□□ 1.8
RTCA-201ENST00000260563 NOB1Q9ULX3 412 aaKnown RBP26.29■■□□□ 1.8
RTCA-201ENST00000260563 NIP7Q9Y221 180 aaKnown RBP eCLIP26.29■■□□□ 1.8
RTCA-201ENST00000260563 CARMIL3Q8ND23 1372 aa26.28■■□□□ 1.8
RTCA-201ENST00000260563 NFIXQ14938 502 aa26.28■■□□□ 1.8
RTCA-201ENST00000260563 DNAAF4Q8WXU2 420 aa26.28■■□□□ 1.8
RTCA-201ENST00000260563 PXDNLA1KZ92 1463 aa26.28■■□□□ 1.8
RTCA-201ENST00000260563 MMP10P09238 476 aa26.27■■□□□ 1.8
RTCA-201ENST00000260563 POLD1P28340 1107 aa26.27■■□□□ 1.8
RTCA-201ENST00000260563 IRX6P78412 446 aaPredicted RBP26.27■■□□□ 1.8
RTCA-201ENST00000260563 SETDB2Q96T68 719 aa26.27■■□□□ 1.8
RTCA-201ENST00000260563 METTL22Q9BUU2 404 aaPredicted RBP26.27■■□□□ 1.8
RTCA-201ENST00000260563 SPON1Q9HCB6 807 aa26.27■■□□□ 1.8
RTCA-201ENST00000260563 LRP5O75197 1615 aa26.27■■□□□ 1.8
RTCA-201ENST00000260563 GPTP24298 496 aa26.26■■□□□ 1.79
RTCA-201ENST00000260563 NEXNQ0ZGT2 675 aa26.26■■□□□ 1.79
RTCA-201ENST00000260563 TCIRG1Q13488 830 aa26.26■■□□□ 1.79
RTCA-201ENST00000260563 ZKSCAN2Q63HK3 967 aa26.26■■□□□ 1.79
RTCA-201ENST00000260563 MYD88Q99836 296 aa26.26■■□□□ 1.79
RTCA-201ENST00000260563 F6X3S4 739 aa26.25■■□□□ 1.79
RTCA-201ENST00000260563 IPO8O15397 1037 aaKnown RBP26.25■■□□□ 1.79
RTCA-201ENST00000260563 TM4SF1P30408 202 aa26.25■■□□□ 1.79
RTCA-201ENST00000260563 ZNF34Q8IZ26 560 aa26.24■■□□□ 1.79
RTCA-201ENST00000260563 ARHGAP45Q92619 1136 aa26.24■■□□□ 1.79
RTCA-201ENST00000260563 API5Q9BZZ5 524 aaKnown RBP26.24■■□□□ 1.79
RTCA-201ENST00000260563 PARP3Q9Y6F1 533 aa26.24■■□□□ 1.79
RTCA-201ENST00000260563 DDR1Q08345 913 aa26.24■■□□□ 1.79
RTCA-201ENST00000260563 UBN2Q6ZU65 1347 aa26.24■■□□□ 1.79
RTCA-201ENST00000260563 POLRMTO00411 1230 aaKnown RBP26.23■■□□□ 1.79
RTCA-201ENST00000260563 PARP10Q53GL7 1025 aa26.23■■□□□ 1.79
RTCA-201ENST00000260563 ATF7IPQ6VMQ6 1270 aa26.23■■□□□ 1.79
RTCA-201ENST00000260563 ATP5J2-PTCD1G3V325 749 aa26.22■■□□□ 1.79
RTCA-201ENST00000260563 C20orf194Q5TEA3 1177 aa26.22■■□□□ 1.79
RTCA-201ENST00000260563 SLC4A10Q6U841 1118 aa26.22■■□□□ 1.79
RTCA-201ENST00000260563 SGIP1Q9BQI5 828 aa26.22■■□□□ 1.79
RTCA-201ENST00000260563 ISCA1Q9BUE6 129 aa26.22■■□□□ 1.79
RTCA-201ENST00000260563 GTF3C3Q9Y5Q9 886 aa26.22■■□□□ 1.79
RTCA-201ENST00000260563 KIF13BQ9NQT8 1826 aa26.21■■□□□ 1.79
RTCA-201ENST00000260563 LAMB2P55268 1798 aa26.21■■□□□ 1.79
RTCA-201ENST00000260563 TRIM27P14373 513 aa26.21■■□□□ 1.79
RTCA-201ENST00000260563 PTGER2P43116 358 aa26.21■■□□□ 1.79
RTCA-201ENST00000260563 PDE3AQ14432 1141 aa26.21■■□□□ 1.79
RTCA-201ENST00000260563 IBTKQ9P2D0 1353 aaPredicted RBP26.2■■□□□ 1.79
RTCA-201ENST00000260563 SERPINB2P05120 415 aa26.19■■□□□ 1.78
RTCA-201ENST00000260563 MS4A1P11836 297 aa26.19■■□□□ 1.78
RTCA-201ENST00000260563 NLRP10Q86W26 655 aa26.19■■□□□ 1.78
RTCA-201ENST00000260563 FAM177BA6PVY3 158 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms