RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 ZBTB1Q9Y2K1 713 aa20.23■□□□□ 0.83
RABEPK-201ENST00000259460 CCDC93Q567U6 631 aa20.22■□□□□ 0.83
RABEPK-201ENST00000259460 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
RABEPK-201ENST00000259460 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
RABEPK-201ENST00000259460 WASHC2AQ641Q2 1341 aa20.21■□□□□ 0.83
RABEPK-201ENST00000259460 HABP4Q5JVS0 413 aaKnown RBP20.21■□□□□ 0.83
RABEPK-201ENST00000259460 NBPF15Q8N660 670 aa20.21■□□□□ 0.83
RABEPK-201ENST00000259460 NFATC2IPQ8NCF5 419 aa20.21■□□□□ 0.83
RABEPK-201ENST00000259460 SCN11AQ9UI33 1791 aa20.2■□□□□ 0.82
RABEPK-201ENST00000259460 FKBP4Q02790 459 aaKnown RBP eCLIP20.2■□□□□ 0.82
RABEPK-201ENST00000259460 STYK1Q6J9G0 422 aa20.2■□□□□ 0.82
RABEPK-201ENST00000259460 ST20-MTHFSA0A0A6YYL1 179 aa20.19■□□□□ 0.82
RABEPK-201ENST00000259460 CYP19A1P11511 503 aaPredicted RBP20.19■□□□□ 0.82
RABEPK-201ENST00000259460 MTHFSP49914 203 aa20.19■□□□□ 0.82
RABEPK-201ENST00000259460 GPC2Q8N158 579 aa20.19■□□□□ 0.82
RABEPK-201ENST00000259460 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
RABEPK-201ENST00000259460 TBC1D9BQ66K14 1250 aa20.18■□□□□ 0.82
RABEPK-201ENST00000259460 SAPCD2Q86UD0 394 aa20.18■□□□□ 0.82
RABEPK-201ENST00000259460 LMOD1P29536 600 aaPredicted RBP20.17■□□□□ 0.82
RABEPK-201ENST00000259460 FZD9O00144 591 aa20.16■□□□□ 0.82
RABEPK-201ENST00000259460 SRGNP10124 158 aa20.16■□□□□ 0.82
RABEPK-201ENST00000259460 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
RABEPK-201ENST00000259460 MASTLQ96GX5 879 aa20.16■□□□□ 0.82
RABEPK-201ENST00000259460 TESK2Q96S53 571 aa20.16■□□□□ 0.82
RABEPK-201ENST00000259460 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
RABEPK-201ENST00000259460 NPHP1O15259 732 aa20.15■□□□□ 0.82
RABEPK-201ENST00000259460 EIF4A2Q14240 407 aaKnown RBP20.15■□□□□ 0.82
RABEPK-201ENST00000259460 GJA3Q9Y6H8 435 aa20.15■□□□□ 0.82
RABEPK-201ENST00000259460 CELF2O95319 508 aaKnown RBP20.14■□□□□ 0.81
RABEPK-201ENST00000259460 C1orf141Q5JVX7 400 aa20.14■□□□□ 0.81
RABEPK-201ENST00000259460 CNBD1Q8NA66 436 aa20.14■□□□□ 0.81
RABEPK-201ENST00000259460 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
RABEPK-201ENST00000259460 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
RABEPK-201ENST00000259460 C7orf43Q8WVR3 580 aa20.13■□□□□ 0.81
RABEPK-201ENST00000259460 HHIPL1Q96JK4 782 aa20.13■□□□□ 0.81
RABEPK-201ENST00000259460 ST5P78524 1137 aa20.12■□□□□ 0.81
RABEPK-201ENST00000259460 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
RABEPK-201ENST00000259460 OLFM4Q6UX06 510 aa20.12■□□□□ 0.81
RABEPK-201ENST00000259460 ZIC5Q96T25 663 aa20.12■□□□□ 0.81
RABEPK-201ENST00000259460 COL4A5P29400 1685 aa20.11■□□□□ 0.81
RABEPK-201ENST00000259460 EPS15P42566 896 aa20.11■□□□□ 0.81
RABEPK-201ENST00000259460 SCNN1DP51172 638 aa20.11■□□□□ 0.81
RABEPK-201ENST00000259460 NOGQ13253 232 aa20.1■□□□□ 0.81
RABEPK-201ENST00000259460 AMOTQ4VCS5 1084 aa20.1■□□□□ 0.81
RABEPK-201ENST00000259460 USP50Q70EL3 339 aaPredicted RBP20.09■□□□□ 0.81
RABEPK-201ENST00000259460 ZNF408Q9H9D4 720 aa20.09■□□□□ 0.81
RABEPK-201ENST00000259460 EIF6P56537 245 aaKnown RBP20.08■□□□□ 0.81
RABEPK-201ENST00000259460 CTU1Q7Z7A3 348 aaKnown RBP20.08■□□□□ 0.81
RABEPK-201ENST00000259460 JDP2Q8WYK2 163 aa20.08■□□□□ 0.81
RABEPK-201ENST00000259460 HPS5Q9UPZ3 1129 aa20.08■□□□□ 0.81
RABEPK-201ENST00000259460 A0A087WZG4 1122 aa20.07■□□□□ 0.8
RABEPK-201ENST00000259460 FXR1P51114 621 aaKnown RBP eCLIP20.07■□□□□ 0.8
RABEPK-201ENST00000259460 RTKN2Q8IZC4 609 aa20.07■□□□□ 0.8
RABEPK-201ENST00000259460 SAGE1Q9NXZ1 904 aa20.07■□□□□ 0.8
RABEPK-201ENST00000259460 UBR2Q8IWV8 1755 aa20.07■□□□□ 0.8
RABEPK-201ENST00000259460 MRC1P22897 1456 aa20.07■□□□□ 0.8
RABEPK-201ENST00000259460 AKAP11Q9UKA4 1901 aa20.06■□□□□ 0.8
RABEPK-201ENST00000259460 SLC39A6Q13433 755 aa20.06■□□□□ 0.8
RABEPK-201ENST00000259460 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
RABEPK-201ENST00000259460 POLKQ9UBT6 870 aa20.06■□□□□ 0.8
RABEPK-201ENST00000259460 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
RABEPK-201ENST00000259460 GLIS2Q9BZE0 524 aaPredicted RBP20.05■□□□□ 0.8
RABEPK-201ENST00000259460 ZNF330Q9Y3S2 320 aaPredicted RBP20.05■□□□□ 0.8
RABEPK-201ENST00000259460 SETDB2Q96T68 719 aa20.04■□□□□ 0.8
RABEPK-201ENST00000259460 NPR1P16066 1061 aa20.03■□□□□ 0.8
RABEPK-201ENST00000259460 AKAP4Q5JQC9 854 aa20.03■□□□□ 0.8
RABEPK-201ENST00000259460 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
RABEPK-201ENST00000259460 TBC1D2BQ9UPU7 963 aa20.03■□□□□ 0.8
RABEPK-201ENST00000259460 DLL1O00548 723 aa20.02■□□□□ 0.8
RABEPK-201ENST00000259460 SNED1Q8TER0 1413 aa20.02■□□□□ 0.8
RABEPK-201ENST00000259460 TRPA1O75762 1119 aa20.02■□□□□ 0.79
RABEPK-201ENST00000259460 AEBP1Q8IUX7 1158 aa20.02■□□□□ 0.79
RABEPK-201ENST00000259460 CARD14Q9BXL6 1004 aa20.02■□□□□ 0.79
RABEPK-201ENST00000259460 HUNKP57058 714 aa20.01■□□□□ 0.79
RABEPK-201ENST00000259460 ADARB2Q9NS39 739 aaKnown RBP20.01■□□□□ 0.79
RABEPK-201ENST00000259460 RNF186Q9NXI6 227 aa20.01■□□□□ 0.79
RABEPK-201ENST00000259460 SLC24A1O60721 1099 aa20■□□□□ 0.79
RABEPK-201ENST00000259460 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
RABEPK-201ENST00000259460 PSMD1Q99460 953 aa19.99■□□□□ 0.79
RABEPK-201ENST00000259460 STARD3NLO95772 234 aa19.98■□□□□ 0.79
RABEPK-201ENST00000259460 MKI67P46013 3256 aaKnown RBP19.97■□□□□ 0.79
RABEPK-201ENST00000259460 FAM155AB1AL88 458 aaPredicted RBP19.97■□□□□ 0.79
RABEPK-201ENST00000259460 TNNT2P45379 298 aaPredicted RBP19.97■□□□□ 0.79
RABEPK-201ENST00000259460 KIF23Q02241 960 aaPredicted RBP19.97■□□□□ 0.79
RABEPK-201ENST00000259460 NBPF5PQ86XG9 351 aaPredicted RBP19.97■□□□□ 0.79
RABEPK-201ENST00000259460 GPRC5DQ9NZD1 345 aa19.97■□□□□ 0.79
RABEPK-201ENST00000259460 CAMTA2O94983 1202 aa19.96■□□□□ 0.79
RABEPK-201ENST00000259460 LARGE2Q8N3Y3 721 aa19.96■□□□□ 0.79
RABEPK-201ENST00000259460 LGR6Q9HBX8 967 aa19.96■□□□□ 0.79
RABEPK-201ENST00000259460 RGMBQ6NW40 437 aa19.95■□□□□ 0.78
RABEPK-201ENST00000259460 PKN2Q16513 984 aaKnown RBP19.93■□□□□ 0.78
RABEPK-201ENST00000259460 KLRG2A4D1S0 409 aaPredicted RBP19.92■□□□□ 0.78
RABEPK-201ENST00000259460 IL6STP40189 918 aaPredicted RBP19.92■□□□□ 0.78
RABEPK-201ENST00000259460 NPM2Q86SE8 214 aaKnown RBP19.92■□□□□ 0.78
RABEPK-201ENST00000259460 NIM1KQ8IY84 436 aa19.92■□□□□ 0.78
RABEPK-201ENST00000259460 RNMTO43148 476 aaKnown RBP19.91■□□□□ 0.78
RABEPK-201ENST00000259460 ALDH1B1P30837 517 aa19.91■□□□□ 0.78
RABEPK-201ENST00000259460 CDC37L1Q7L3B6 337 aa19.91■□□□□ 0.78
RABEPK-201ENST00000259460 PGAP2Q9UHJ9 254 aa19.91■□□□□ 0.78
RABEPK-201ENST00000259460 HDAC9Q9UKV0 1011 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms