RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SLC39A6Q13433 755 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 ZSCAN31Q96LW9 406 aaPredicted RBP5.64□□□□□ -1.51
USP44-201ENST00000258499 HECW2Q9P2P5 1572 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 ROBO2Q9HCK4 1378 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 MED14O60244 1454 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 NPHP1O15259 732 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 HSPA4P34932 840 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 GUCY1B3Q02153 619 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 NOLC1Q14978 699 aaKnown RBP eCLIP5.63□□□□□ -1.51
USP44-201ENST00000258499 HS1BP3Q53T59 392 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 FILIP1Q7Z7B0 1213 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 OSBPL3Q9H4L5 887 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 VWDEQ8N2E2 1590 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 LMTK2Q8IWU2 1503 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 TTC21AQ8NDW8 1320 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 ATP7BP35670 1465 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 KIDINS220Q9ULH0 1771 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 PLEKHG3A1L390 1219 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 KCNA6P17658 529 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 MCM5P33992 734 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 CCDC73Q6ZRK6 1079 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 FAM227BQ96M60 508 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 MYD88Q99836 296 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 SDF4Q9BRK5 362 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 SH2B1Q9NRF2 756 aaPredicted RBP5.63□□□□□ -1.51
USP44-201ENST00000258499 KIF3AQ9Y496 699 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 NDUFB9Q9Y6M9 179 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 KIAA1210Q9ULL0 1709 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 RAD50Q92878 1312 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 NCOA3Q9Y6Q9 1424 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 ATP5J2-PTCD1G3V325 749 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 HIP1O00291 1037 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 NRDCO43847 1150 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 PTCD1O75127 700 aaKnown RBP5.63□□□□□ -1.51
USP44-201ENST00000258499 TPD52L1Q16890 204 aaPredicted RBP5.63□□□□□ -1.51
USP44-201ENST00000258499 EVI5LQ96CN4 794 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 CCDC85AQ96PX6 553 aaPredicted RBP5.63□□□□□ -1.51
USP44-201ENST00000258499 ARHGEF40Q8TER5 1519 aa5.63□□□□□ -1.51
USP44-201ENST00000258499 MAP3K5Q99683 1374 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 NEO1Q92859 1461 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 CDK12Q9NYV4 1490 aaPredicted RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 CYP2E1P05181 493 aaPredicted RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 CBX1P83916 185 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 PTH1RQ03431 593 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 NMIQ13287 307 aaPredicted RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 WASHC4Q2M389 1173 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 SSH3Q8TE77 659 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 C16orf45Q96MC5 204 aaPredicted RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 IL25Q9H293 177 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 DACT1Q9NYF0 836 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 PCDH10Q9P2E7 1040 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 NEXMIFQ5QGS0 1516 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 IBTKQ9P2D0 1353 aaPredicted RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 ABCA9Q8IUA7 1624 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 COL3A1P02461 1466 aaPredicted RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 CAMSAP1Q5T5Y3 1602 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 ME1P48163 572 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 ADCK5Q3MIX3 580 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 RUFY3Q7L099 469 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 EDC3Q96F86 508 aaKnown RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 CD163L1Q9NR16 1453 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 ARHGAP31Q2M1Z3 1444 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 ATP10DQ9P241 1426 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 MROH1Q8NDA8 1641 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 CPLX1O14810 134 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 KINO60870 393 aaKnown RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 CCT2P78371 535 aaKnown RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 CUL4AQ13619 759 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 ANKRD1Q15327 319 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 NBPF6Q5VWK0 638 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 CREB3L3Q68CJ9 461 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 DDX46Q7L014 1031 aaKnown RBP5.62□□□□□ -1.51
USP44-201ENST00000258499 LUZP1Q86V48 1076 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 NBPF4Q96M43 638 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 TOMM22Q9NS69 142 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 SBNO1A3KN83 1393 aa5.62□□□□□ -1.51
USP44-201ENST00000258499 SHPRHQ149N8 1683 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 GRM8O00222 908 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 DYNC1I1O14576 645 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 LARGE1O95461 756 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 APPP05067 770 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 CLEC17AQ6ZS10 378 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 UBE3BQ7Z3V4 1068 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 MTERF4Q7Z6M4 381 aaKnown RBP5.61□□□□□ -1.51
USP44-201ENST00000258499 ALKQ9UM73 1620 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 SPDYE4A6NLX3 237 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 CCDC186Q7Z3E2 898 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 BICC1Q9H694 974 aaKnown RBP5.61□□□□□ -1.51
USP44-201ENST00000258499 DEPDC5O75140 1603 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 ZNF165P49910 485 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 EIF4A1P60842 406 aaKnown RBP5.61□□□□□ -1.51
USP44-201ENST00000258499 FKBP4Q02790 459 aaKnown RBP eCLIP5.61□□□□□ -1.51
USP44-201ENST00000258499 UVSSAQ2YD98 709 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 ANO6Q4KMQ2 910 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 RAB11FIP4Q86YS3 637 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 BRF1Q92994 677 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 SCAND2PQ9GZW5 306 aaPredicted RBP5.61□□□□□ -1.51
USP44-201ENST00000258499 STAP2Q9UGK3 403 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 CCDC171Q6TFL3 1326 aa5.61□□□□□ -1.51
USP44-201ENST00000258499 TMEM2Q9UHN6 1383 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms