RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1.01
EFR3A-201ENST00000254624 ATP6V1AP38606 617 aa21.33■■□□□ 1
EFR3A-201ENST00000254624 GCP02774 474 aa21.33■■□□□ 1
EFR3A-201ENST00000254624 MYO6Q9UM54 1294 aa21.33■■□□□ 1
EFR3A-201ENST00000254624 GOLIM4O00461 696 aa21.32■■□□□ 1
EFR3A-201ENST00000254624 RANBP6O60518 1105 aaKnown RBP21.32■■□□□ 1
EFR3A-201ENST00000254624 TNIP1Q15025 636 aa21.32■■□□□ 1
EFR3A-201ENST00000254624 IP6K1Q92551 441 aa21.32■■□□□ 1
EFR3A-201ENST00000254624 UPF3BQ9BZI7 483 aaKnown RBP21.32■■□□□ 1
EFR3A-201ENST00000254624 HMG20BQ9P0W2 317 aa21.32■■□□□ 1
EFR3A-201ENST00000254624 MCM4P33991 863 aa21.32■■□□□ 1
EFR3A-201ENST00000254624 HSP90AA2PQ14568 343 aaPredicted RBP21.32■■□□□ 1
EFR3A-201ENST00000254624 TEX35Q5T0J7 233 aa21.32■■□□□ 1
EFR3A-201ENST00000254624 TTC22Q5TAA0 569 aa21.32■■□□□ 1
EFR3A-201ENST00000254624 COPS6Q7L5N1 327 aa21.31■■□□□ 1
EFR3A-201ENST00000254624 DCAF5Q96JK2 942 aa21.31■■□□□ 1
EFR3A-201ENST00000254624 BCL11BQ9C0K0 894 aaPredicted RBP21.31■■□□□ 1
EFR3A-201ENST00000254624 CFAP74Q9C0B2 1584 aa21.31■■□□□ 1
EFR3A-201ENST00000254624 SMTNL1A8MU46 457 aa21.31■■□□□ 1
EFR3A-201ENST00000254624 GSTO1P78417 241 aa21.31■■□□□ 1
EFR3A-201ENST00000254624 RHPN1Q8TCX5 695 aa21.31■■□□□ 1
EFR3A-201ENST00000254624 SCAND2PQ9GZW5 306 aaPredicted RBP21.31■■□□□ 1
EFR3A-201ENST00000254624 ZRANB1Q9UGI0 708 aa21.31■■□□□ 1
EFR3A-201ENST00000254624 C8orf76Q96K31 380 aa21.3■■□□□ 1
EFR3A-201ENST00000254624 HOXC9P31274 260 aa21.3■■□□□ 1
EFR3A-201ENST00000254624 CATIPQ7Z7H3 387 aa21.3■■□□□ 1
EFR3A-201ENST00000254624 IFIT3O14879 490 aaKnown RBP21.3■■□□□ 1
EFR3A-201ENST00000254624 SSBP05455 408 aaKnown RBP eCLIP21.3■■□□□ 1
EFR3A-201ENST00000254624 PIBF1Q8WXW3 757 aa21.3■■□□□ 1
EFR3A-201ENST00000254624 GRM8O00222 908 aa21.29■■□□□ 1
EFR3A-201ENST00000254624 SETDB2Q96T68 719 aa21.29■■□□□ 1
EFR3A-201ENST00000254624 TNNT3P45378 269 aaPredicted RBP21.29■■□□□ 1
EFR3A-201ENST00000254624 SSRP1Q08945 709 aaKnown RBP21.29■■□□□ 1
EFR3A-201ENST00000254624 TANGO6Q9C0B7 1094 aa21.29■■□□□ 1
EFR3A-201ENST00000254624 COL17A1Q9UMD9 1497 aaPredicted RBP21.29■■□□□ 1
EFR3A-201ENST00000254624 PCDH11XQ9BZA7 1347 aa21.29■■□□□ 1
EFR3A-201ENST00000254624 PCDH11YQ9BZA8 1340 aa21.29■■□□□ 1
EFR3A-201ENST00000254624 ZFYP08048 801 aaPredicted RBP21.29■■□□□ 1
EFR3A-201ENST00000254624 EDC4Q6P2E9 1401 aaKnown RBP21.28■■□□□ 1
EFR3A-201ENST00000254624 ANXA1P04083 346 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 NUCB1Q02818 461 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 ANKRD18AQ8IVF6 992 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 GOLGA8AA7E2F4 631 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 GOLGA8BA8MQT2 603 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 ERCC4Q92889 916 aaPredicted RBP21.28■■□□□ 1
EFR3A-201ENST00000254624 PDE4BQ07343 736 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 SLC39A6Q13433 755 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 ANKRD44Q8N8A2 993 aa21.28■■□□□ 1
EFR3A-201ENST00000254624 ATP8B2P98198 1209 aa21.27■■□□□ 1
EFR3A-201ENST00000254624 C8orf37Q96NL8 207 aa21.27■■□□□ 1
EFR3A-201ENST00000254624 EYA1Q99502 592 aa21.27■■□□□ 1
EFR3A-201ENST00000254624 NYXQ9GZU5 481 aa21.27■■□□□ 1
EFR3A-201ENST00000254624 MAP3K11Q16584 847 aa21.27■■□□□ 1
EFR3A-201ENST00000254624 TBC1D9Q6ZT07 1266 aa21.27■■□□□ 1
EFR3A-201ENST00000254624 CDCA7Q9BWT1 371 aaPredicted RBP21.27■■□□□ 1
EFR3A-201ENST00000254624 WDHD1O75717 1129 aaPredicted RBP21.26■□□□□ 0.99
EFR3A-201ENST00000254624 IL15P40933 162 aaPredicted RBP21.26■□□□□ 0.99
EFR3A-201ENST00000254624 ZGPATQ8N5A5 531 aaKnown RBP21.26■□□□□ 0.99
EFR3A-201ENST00000254624 CARD14Q9BXL6 1004 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 NPC1L1Q9UHC9 1359 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 CUL5Q93034 780 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 RAB34Q9BZG1 259 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 EHMT1Q9H9B1 1298 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 CCDC96Q2M329 555 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 MEIS3Q99687 375 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 TTLL5Q6EMB2 1281 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 CABLES1Q8TDN4 633 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 ZFYVE16Q7Z3T8 1539 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 KIF5BP33176 963 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 LINS1Q8NG48 757 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 ACSBG1Q96GR2 724 aa21.26■□□□□ 0.99
EFR3A-201ENST00000254624 HSPA2P54652 639 aa21.25■□□□□ 0.99
EFR3A-201ENST00000254624 NLRP3Q96P20 1036 aa21.25■□□□□ 0.99
EFR3A-201ENST00000254624 HSP90B2PQ58FF3 399 aa21.25■□□□□ 0.99
EFR3A-201ENST00000254624 CCDC12Q8WUD4 166 aaPredicted RBP21.25■□□□□ 0.99
EFR3A-201ENST00000254624 UTP14AQ9BVJ6 771 aaKnown RBP21.25■□□□□ 0.99
EFR3A-201ENST00000254624 DEF6Q9H4E7 631 aa21.25■□□□□ 0.99
EFR3A-201ENST00000254624 BABAM1Q9NWV8 329 aa21.25■□□□□ 0.99
EFR3A-201ENST00000254624 CRNKL1Q9BZJ0 848 aaKnown RBP21.25■□□□□ 0.99
EFR3A-201ENST00000254624 HLA-DOAP06340 250 aa21.25■□□□□ 0.99
EFR3A-201ENST00000254624 NCOA7Q8NI08 942 aa21.24■□□□□ 0.99
EFR3A-201ENST00000254624 SBNO1A3KN83 1393 aa21.24■□□□□ 0.99
EFR3A-201ENST00000254624 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
EFR3A-201ENST00000254624 ATP2B3Q16720 1220 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 MFSD6Q6ZSS7 791 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 ZNF622Q969S3 477 aaKnown RBP eCLIP21.23■□□□□ 0.992e-6■■■■□ 19.4
EFR3A-201ENST00000254624 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.23■□□□□ 0.999e-12■■■■■ 149.1
EFR3A-201ENST00000254624 SNRKQ9NRH2 765 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 LMTK3Q96Q04 1460 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 SPC24Q8NBT2 197 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 NFATC2IPQ8NCF5 419 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 RNMTO43148 476 aaKnown RBP21.23■□□□□ 0.99
EFR3A-201ENST00000254624 GRPEL1Q9HAV7 217 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 IGHDP01880 384 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 FERMT3Q86UX7 667 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 ARHGEF5Q12774 1597 aa21.23■□□□□ 0.99
EFR3A-201ENST00000254624 TMEM266Q2M3C6 531 aa21.22■□□□□ 0.99
EFR3A-201ENST00000254624 CCDC178Q5BJE1 867 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms