RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 KDM5BQ9UGL1 1544 aa23.07■■□□□ 1.28
SOX4-201ENST00000244745 ZNF213O14771 459 aa23.07■■□□□ 1.28
SOX4-201ENST00000244745 PTCD1O75127 700 aaKnown RBP23.07■■□□□ 1.28
SOX4-201ENST00000244745 RAB3GAP1Q15042 981 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 CEP135Q66GS9 1140 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 SYCP2Q9BX26 1530 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 PRDM11Q9NQV5 511 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 FBXO3Q9UK99 471 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 KIF5CO60282 957 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 ABCF2Q9UG63 623 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 NEMFO60524 1076 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 IGHMBP2P38935 993 aaKnown RBP23.06■■□□□ 1.28
SOX4-201ENST00000244745 CCDC82Q8N4S0 544 aa23.06■■□□□ 1.28
SOX4-201ENST00000244745 ANKRD44Q8N8A2 993 aa23.05■■□□□ 1.28
SOX4-201ENST00000244745 CNNM3Q8NE01 707 aa23.05■■□□□ 1.28
SOX4-201ENST00000244745 MINDY4BA8MYZ0 360 aa23.05■■□□□ 1.28
SOX4-201ENST00000244745 ZNF165P49910 485 aa23.05■■□□□ 1.28
SOX4-201ENST00000244745 NOLC1Q14978 699 aaKnown RBP eCLIP23.05■■□□□ 1.28
SOX4-201ENST00000244745 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
SOX4-201ENST00000244745 GOLIM4O00461 696 aa23.05■■□□□ 1.28
SOX4-201ENST00000244745 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
SOX4-201ENST00000244745 RHPN1Q8TCX5 695 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 NEK1Q96PY6 1258 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 RRAGDQ9NQL2 400 aaPredicted RBP23.04■■□□□ 1.28
SOX4-201ENST00000244745 GIMAP7Q8NHV1 300 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 TESK2Q96S53 571 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 NAPBQ9H115 298 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
SOX4-201ENST00000244745 SHTN1A0MZ66 631 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 SSRP1Q08945 709 aaKnown RBP23.04■■□□□ 1.28
SOX4-201ENST00000244745 ISM2Q6H9L7 571 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 CPLX3Q8WVH0 158 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 SLC12A7Q9Y666 1083 aa23.04■■□□□ 1.28
SOX4-201ENST00000244745 GSDMDP57764 484 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 CRACR2AQ9BSW2 395 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 PRIM1P49642 420 aaKnown RBP23.03■■□□□ 1.28
SOX4-201ENST00000244745 SEPT11Q9NVA2 429 aaKnown RBP23.03■■□□□ 1.28
SOX4-201ENST00000244745 ZKSCAN5Q9Y2L8 839 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 GOLGA8AA7E2F4 631 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 KIF4BQ2VIQ3 1234 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 RAB11FIP4Q86YS3 637 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 GOLGA6L7A0A1B0GV03 622 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 ZNF397Q8NF99 534 aaPredicted RBP23.03■■□□□ 1.28
SOX4-201ENST00000244745 PAXBP1Q9Y5B6 917 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 PIK3C2GO75747 1445 aa23.03■■□□□ 1.28
SOX4-201ENST00000244745 A0A087WZG4 1122 aa23.02■■□□□ 1.28
SOX4-201ENST00000244745 POLR3DP05423 398 aaPredicted RBP23.02■■□□□ 1.28
SOX4-201ENST00000244745 SMC5Q8IY18 1101 aa23.02■■□□□ 1.28
SOX4-201ENST00000244745 CCDC144CPQ8IYA2 1237 aa23.02■■□□□ 1.28
SOX4-201ENST00000244745 TIGD1Q96MW7 591 aa23.02■■□□□ 1.28
SOX4-201ENST00000244745 ANXA1P04083 346 aa23.02■■□□□ 1.27
SOX4-201ENST00000244745 SNW1Q13573 536 aaKnown RBP23.02■■□□□ 1.27
SOX4-201ENST00000244745 JAKMIP3Q5VZ66 844 aa23.01■■□□□ 1.27
SOX4-201ENST00000244745 BICDL1Q6ZP65 573 aa23.01■■□□□ 1.27
SOX4-201ENST00000244745 ANO6Q4KMQ2 910 aa23.01■■□□□ 1.27
SOX4-201ENST00000244745 CCDC94Q9BW85 323 aaPredicted RBP23.01■■□□□ 1.27
SOX4-201ENST00000244745 STARD3NLO95772 234 aa23.01■■□□□ 1.27
SOX4-201ENST00000244745 AMOTL2Q9Y2J4 779 aa23.01■■□□□ 1.27
SOX4-201ENST00000244745 ZMYM4Q5VZL5 1548 aa23■■□□□ 1.27
SOX4-201ENST00000244745 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
SOX4-201ENST00000244745 BMS1Q14692 1282 aaKnown RBP23■■□□□ 1.27
SOX4-201ENST00000244745 BMP2KQ9NSY1 1161 aaPredicted RBP23■■□□□ 1.27
SOX4-201ENST00000244745 ACEP12821 1306 aa23■■□□□ 1.27
SOX4-201ENST00000244745 HAND2P61296 217 aa23■■□□□ 1.27
SOX4-201ENST00000244745 IFIT5Q13325 482 aaKnown RBP23■■□□□ 1.27
SOX4-201ENST00000244745 KRT222Q8N1A0 295 aa23■■□□□ 1.27
SOX4-201ENST00000244745 HMG20BQ9P0W2 317 aa23■■□□□ 1.27
SOX4-201ENST00000244745 USP16Q9Y5T5 823 aa22.99■■□□□ 1.27
SOX4-201ENST00000244745 TSPYL6Q8N831 410 aa22.99■■□□□ 1.27
SOX4-201ENST00000244745 USP5P45974 858 aa22.99■■□□□ 1.27
SOX4-201ENST00000244745 NUP88Q99567 741 aaPredicted RBP22.99■■□□□ 1.27
SOX4-201ENST00000244745 SPA17Q15506 151 aa22.98■■□□□ 1.27
SOX4-201ENST00000244745 ZGPATQ8N5A5 531 aaKnown RBP22.98■■□□□ 1.27
SOX4-201ENST00000244745 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
SOX4-201ENST00000244745 IFIT3O14879 490 aaKnown RBP22.98■■□□□ 1.27
SOX4-201ENST00000244745 TAF4BQ92750 862 aa22.98■■□□□ 1.27
SOX4-201ENST00000244745 TCEANC2Q96MN5 208 aa22.98■■□□□ 1.27
SOX4-201ENST00000244745 ZBTB40Q9NUA8 1239 aa22.98■■□□□ 1.27
SOX4-201ENST00000244745 ATP10BO94823 1461 aa22.98■■□□□ 1.27
SOX4-201ENST00000244745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.98■■□□□ 1.27
SOX4-201ENST00000244745 CARD14Q9BXL6 1004 aa22.98■■□□□ 1.27
SOX4-201ENST00000244745 ATP5J2-PTCD1G3V325 749 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 MAP9Q49MG5 647 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 CHPF2Q9P2E5 772 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 PHF8Q9UPP1 1060 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 F13A1P00488 732 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 ANAPC15P60006 121 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 CCDC196A0A1B0GTZ2 297 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 TMEM132AQ24JP5 1023 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 DNM1Q05193 864 aaKnown RBP22.97■■□□□ 1.27
SOX4-201ENST00000244745 TMOD3Q9NYL9 352 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 KDM2BQ8NHM5 1336 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 TAX1BP1Q86VP1 789 aa22.97■■□□□ 1.27
SOX4-201ENST00000244745 IBSPP21815 317 aaPredicted RBP22.96■■□□□ 1.27
SOX4-201ENST00000244745 GPATCH11Q8N954 259 aa22.96■■□□□ 1.27
SOX4-201ENST00000244745 LRRC2Q9BYS8 371 aa22.96■■□□□ 1.27
SOX4-201ENST00000244745 LMAN1P49257 510 aa22.96■■□□□ 1.27
SOX4-201ENST00000244745 GTPBP4Q9BZE4 634 aaKnown RBP22.96■■□□□ 1.27
SOX4-201ENST00000244745 SNRKQ9NRH2 765 aa22.96■■□□□ 1.27
SOX4-201ENST00000244745 RBM8AQ9Y5S9 174 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms