RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 USHBP1Q8N6Y0 703 aa12.58□□□□□ -0.4
TTC1-201ENST00000231238 SOS2Q07890 1332 aaPredicted RBP12.58□□□□□ -0.4
TTC1-201ENST00000231238 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
TTC1-201ENST00000231238 TRMT2AQ8IZ69 625 aaKnown RBP12.57□□□□□ -0.4
TTC1-201ENST00000231238 NECTIN2Q92692 538 aa12.57□□□□□ -0.4
TTC1-201ENST00000231238 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
TTC1-201ENST00000231238 TOM1O60784 492 aa12.56□□□□□ -0.4
TTC1-201ENST00000231238 GNAI1P63096 354 aa12.56□□□□□ -0.4
TTC1-201ENST00000231238 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
TTC1-201ENST00000231238 CHRNA2Q15822 529 aa12.55□□□□□ -0.4
TTC1-201ENST00000231238 IFFO2Q5TF58 517 aa12.55□□□□□ -0.4
TTC1-201ENST00000231238 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
TTC1-201ENST00000231238 NLRP2Q9NX02 1062 aa12.55□□□□□ -0.4
TTC1-201ENST00000231238 KDRP35968 1356 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 FANCIQ9NVI1 1328 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 CFHP08603 1231 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 PIP4K2BP78356 416 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 MDM2Q00987 491 aaPredicted RBP12.54□□□□□ -0.4
TTC1-201ENST00000231238 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
TTC1-201ENST00000231238 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 MTRQ99707 1265 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 THUMPD2Q9BTF0 503 aaKnown RBP12.54□□□□□ -0.4
TTC1-201ENST00000231238 MED1Q15648 1581 aaPredicted RBP12.54□□□□□ -0.4
TTC1-201ENST00000231238 KIAA0232Q92628 1395 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
TTC1-201ENST00000231238 MTHFSDQ2M296 383 aaKnown RBP12.53□□□□□ -0.4
TTC1-201ENST00000231238 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 RGPD1P0DJD0 1748 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 LTBP4Q8N2S1 1624 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 FAM83GA6ND36 823 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 PLIN1O60240 522 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
TTC1-201ENST00000231238 EXOSC9Q06265 439 aaKnown RBP12.53□□□□□ -0.4
TTC1-201ENST00000231238 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
TTC1-201ENST00000231238 MCM10Q7L590 875 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 PPP4R2Q9NY27 417 aa12.53□□□□□ -0.4
TTC1-201ENST00000231238 PHRF1Q9P1Y6 1649 aaKnown RBP12.52□□□□□ -0.41
TTC1-201ENST00000231238 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
TTC1-201ENST00000231238 GNAT3A8MTJ3 354 aa12.51□□□□□ -0.41
TTC1-201ENST00000231238 UBAP1LF5GYI3 381 aa12.51□□□□□ -0.41
TTC1-201ENST00000231238 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
TTC1-201ENST00000231238 EVA1CP58658 441 aa12.51□□□□□ -0.41
TTC1-201ENST00000231238 KCNC4Q03721 635 aa12.51□□□□□ -0.41
TTC1-201ENST00000231238 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
TTC1-201ENST00000231238 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
TTC1-201ENST00000231238 ZNF516Q92618 1163 aa12.51□□□□□ -0.41
TTC1-201ENST00000231238 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
TTC1-201ENST00000231238 CPDO75976 1380 aa12.5□□□□□ -0.41
TTC1-201ENST00000231238 HTATSF1O43719 755 aaKnown RBP12.5□□□□□ -0.41
TTC1-201ENST00000231238 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
TTC1-201ENST00000231238 ZNF530Q6P9A1 599 aaPredicted RBP12.5□□□□□ -0.41
TTC1-201ENST00000231238 RDH13Q8NBN7 331 aa12.5□□□□□ -0.41
TTC1-201ENST00000231238 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
TTC1-201ENST00000231238 ROBO1Q9Y6N7 1651 aa12.5□□□□□ -0.41
TTC1-201ENST00000231238 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
TTC1-201ENST00000231238 BCAR3O75815 825 aa12.49□□□□□ -0.41
TTC1-201ENST00000231238 COPS2P61201 443 aa12.49□□□□□ -0.41
TTC1-201ENST00000231238 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
TTC1-201ENST00000231238 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
TTC1-201ENST00000231238 RARSP54136 660 aaKnown RBP12.48□□□□□ -0.41
TTC1-201ENST00000231238 KMT5BQ4FZB7 885 aa12.48□□□□□ -0.41
TTC1-201ENST00000231238 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
TTC1-201ENST00000231238 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
TTC1-201ENST00000231238 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
TTC1-201ENST00000231238 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
TTC1-201ENST00000231238 IL21Q9HBE4 155 aa12.48□□□□□ -0.41
TTC1-201ENST00000231238 MBIPQ9NS73 344 aa12.48□□□□□ -0.41
TTC1-201ENST00000231238 PCDHB3Q9Y5E6 796 aa12.48□□□□□ -0.41
TTC1-201ENST00000231238 BLOC1S3Q6QNY0 202 aa12.47□□□□□ -0.41
TTC1-201ENST00000231238 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
TTC1-201ENST00000231238 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
TTC1-201ENST00000231238 TSPYL4Q9UJ04 414 aa12.47□□□□□ -0.41
TTC1-201ENST00000231238 ABCC6O95255 1503 aa12.47□□□□□ -0.41
TTC1-201ENST00000231238 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
TTC1-201ENST00000231238 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
TTC1-201ENST00000231238 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 ELL2O00472 640 aaPredicted RBP12.46□□□□□ -0.42
TTC1-201ENST00000231238 TRIM66O15016 1216 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 MS4A1P11836 297 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 CD46P15529 392 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 CLCN1P35523 988 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 GCGRP47871 477 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 TEFQ10587 303 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 AMHR2Q16671 573 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.42
TTC1-201ENST00000231238 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 FTSJ3Q8IY81 847 aaKnown RBP12.46□□□□□ -0.42
TTC1-201ENST00000231238 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 ZNF428Q96B54 188 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 AK7Q96M32 723 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 CRBNQ96SW2 442 aa12.46□□□□□ -0.42
TTC1-201ENST00000231238 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
TTC1-201ENST00000231238 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
TTC1-201ENST00000231238 ZNF853P0CG23 659 aa12.45□□□□□ -0.42
TTC1-201ENST00000231238 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms