RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 RPS6KA4O75676 772 aa20.97■□□□□ 0.95
CHMP5-201ENST00000223500 MVPQ14764 893 aaKnown RBP20.97■□□□□ 0.95
CHMP5-201ENST00000223500 ITPRIPQ8IWB1 547 aa20.97■□□□□ 0.95
CHMP5-201ENST00000223500 MAP3K2Q9Y2U5 619 aa20.97■□□□□ 0.95
CHMP5-201ENST00000223500 RTCBQ9Y3I0 505 aaKnown RBP20.97■□□□□ 0.95
CHMP5-201ENST00000223500 ADCY9O60503 1353 aa20.97■□□□□ 0.95
CHMP5-201ENST00000223500 GNPATO15228 680 aa20.96■□□□□ 0.95
CHMP5-201ENST00000223500 ERICH6BQ5W0A0 696 aa20.96■□□□□ 0.95
CHMP5-201ENST00000223500 INTS3Q68E01 1043 aaKnown RBP20.96■□□□□ 0.95
CHMP5-201ENST00000223500 TTLL7Q6ZT98 887 aa20.96■□□□□ 0.95
CHMP5-201ENST00000223500 CHMP4BQ9H444 224 aaKnown RBP20.96■□□□□ 0.95
CHMP5-201ENST00000223500 PXDNLA1KZ92 1463 aa20.96■□□□□ 0.95
CHMP5-201ENST00000223500 EN1Q05925 392 aaPredicted RBP20.95■□□□□ 0.94
CHMP5-201ENST00000223500 NEXNQ0ZGT2 675 aa20.95■□□□□ 0.94
CHMP5-201ENST00000223500 DDX19BQ9UMR2 479 aa20.95■□□□□ 0.94
CHMP5-201ENST00000223500 DZIP3Q86Y13 1208 aaKnown RBP20.94■□□□□ 0.94
CHMP5-201ENST00000223500 CAMKK2Q96RR4 588 aa20.94■□□□□ 0.94
CHMP5-201ENST00000223500 COL15A1P39059 1388 aa20.94■□□□□ 0.94
CHMP5-201ENST00000223500 ARFGEF2Q9Y6D5 1785 aa20.94■□□□□ 0.94
CHMP5-201ENST00000223500 MAP3K15Q6ZN16 1313 aa20.94■□□□□ 0.94
CHMP5-201ENST00000223500 METTL22Q9BUU2 404 aaPredicted RBP20.94■□□□□ 0.94
CHMP5-201ENST00000223500 SRCIN1Q9C0H9 1055 aa20.94■□□□□ 0.94
CHMP5-201ENST00000223500 ZBTB3Q9H5J0 574 aa20.94■□□□□ 0.94
CHMP5-201ENST00000223500 N4BP2Q86UW6 1770 aaPredicted RBP20.93■□□□□ 0.94
CHMP5-201ENST00000223500 ERVV-1B6SEH8 477 aa20.93■□□□□ 0.94
CHMP5-201ENST00000223500 EZH2Q15910 746 aaKnown RBP20.93■□□□□ 0.94
CHMP5-201ENST00000223500 EXOC6Q8TAG9 804 aa20.93■□□□□ 0.94
CHMP5-201ENST00000223500 ATP10DQ9P241 1426 aa20.92■□□□□ 0.94
CHMP5-201ENST00000223500 AAMPQ13685 434 aa20.92■□□□□ 0.94
CHMP5-201ENST00000223500 TBC1D2BQ9UPU7 963 aa20.92■□□□□ 0.94
CHMP5-201ENST00000223500 NUP188Q5SRE5 1749 aa20.92■□□□□ 0.94
CHMP5-201ENST00000223500 ADRA2BP18089 450 aa20.91■□□□□ 0.94
CHMP5-201ENST00000223500 HSP90AB3PQ58FF7 597 aa20.91■□□□□ 0.94
CHMP5-201ENST00000223500 TRAPPC3LQ5T215 181 aa20.91■□□□□ 0.94
CHMP5-201ENST00000223500 BEND3Q5T5X7 828 aa20.91■□□□□ 0.94
CHMP5-201ENST00000223500 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
CHMP5-201ENST00000223500 GTF3C3Q9Y5Q9 886 aa20.91■□□□□ 0.94
CHMP5-201ENST00000223500 UBR3Q6ZT12 1888 aa20.9■□□□□ 0.94
CHMP5-201ENST00000223500 ALDH1L1O75891 902 aa20.9■□□□□ 0.94
CHMP5-201ENST00000223500 DEFB132Q7Z7B7 95 aa20.9■□□□□ 0.94
CHMP5-201ENST00000223500 MYD88Q99836 296 aa20.9■□□□□ 0.94
CHMP5-201ENST00000223500 GIGYF2Q6Y7W6 1299 aaKnown RBP20.89■□□□□ 0.94
CHMP5-201ENST00000223500 NUP98P52948 1817 aa20.89■□□□□ 0.93
CHMP5-201ENST00000223500 SSFA2P28290 1259 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 ZNF652Q9Y2D9 606 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 RGL2O15211 777 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 ZPR1O75312 459 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 RFC4P35249 363 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 TCIRG1Q13488 830 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 AKT1S1Q96B36 256 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 TFCP2L1Q9NZI6 479 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 NARFQ9UHQ1 456 aa20.88■□□□□ 0.93
CHMP5-201ENST00000223500 AFDNP55196 1824 aaKnown RBP20.87■□□□□ 0.93
CHMP5-201ENST00000223500 ZBTB7BO15156 539 aaPredicted RBP20.87■□□□□ 0.93
CHMP5-201ENST00000223500 PHF14O94880 888 aa20.87■□□□□ 0.93
CHMP5-201ENST00000223500 CAMTA2O94983 1202 aa20.87■□□□□ 0.93
CHMP5-201ENST00000223500 ARHGEF1Q92888 912 aaKnown RBP20.87■□□□□ 0.93
CHMP5-201ENST00000223500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.86■□□□□ 0.93
CHMP5-201ENST00000223500 HLFQ16534 295 aa20.86■□□□□ 0.93
CHMP5-201ENST00000223500 CLEC4GQ6UXB4 293 aa20.86■□□□□ 0.93
CHMP5-201ENST00000223500 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
CHMP5-201ENST00000223500 STK32BQ9NY57 414 aa20.86■□□□□ 0.93
CHMP5-201ENST00000223500 BCORQ6W2J9 1755 aa20.85■□□□□ 0.93
CHMP5-201ENST00000223500 NEURL1BA8MQ27 555 aa20.85■□□□□ 0.93
CHMP5-201ENST00000223500 IGKV5-2P06315 115 aa20.85■□□□□ 0.93
CHMP5-201ENST00000223500 GNAI3P08754 354 aa20.85■□□□□ 0.93
CHMP5-201ENST00000223500 UPF1Q92900 1129 aaKnown RBP eCLIP20.85■□□□□ 0.93
CHMP5-201ENST00000223500 IBTKQ9P2D0 1353 aaPredicted RBP20.85■□□□□ 0.93
CHMP5-201ENST00000223500 ANKRD36CQ5JPF3 1778 aa20.84■□□□□ 0.93
CHMP5-201ENST00000223500 ATP5J2-PTCD1G3V325 749 aa20.84■□□□□ 0.93
CHMP5-201ENST00000223500 TRIM28Q13263 835 aaKnown RBP20.84■□□□□ 0.93
CHMP5-201ENST00000223500 ZNF827Q17R98 1081 aa20.84■□□□□ 0.93
CHMP5-201ENST00000223500 CWF19L2Q2TBE0 894 aaKnown RBP20.84■□□□□ 0.93
CHMP5-201ENST00000223500 CCDC191Q8NCU4 936 aa20.84■□□□□ 0.93
CHMP5-201ENST00000223500 ISCA1Q9BUE6 129 aa20.84■□□□□ 0.93
CHMP5-201ENST00000223500 C9orf78Q9NZ63 289 aaPredicted RBP20.84■□□□□ 0.93
CHMP5-201ENST00000223500 HDAC5Q9UQL6 1122 aa20.84■□□□□ 0.93
CHMP5-201ENST00000223500 SMIM5Q71RC9 77 aa20.83■□□□□ 0.93
CHMP5-201ENST00000223500 ZBTB40Q9NUA8 1239 aa20.83■□□□□ 0.93
CHMP5-201ENST00000223500 CWC25Q9NXE8 425 aaPredicted RBP20.83■□□□□ 0.93
CHMP5-201ENST00000223500 C4AP0C0L4 1744 aa20.83■□□□□ 0.92
CHMP5-201ENST00000223500 SCN7AQ01118 1682 aa20.83■□□□□ 0.92
CHMP5-201ENST00000223500 GCKRQ14397 625 aa20.82■□□□□ 0.92
CHMP5-201ENST00000223500 USPL1Q5W0Q7 1092 aa20.82■□□□□ 0.92
CHMP5-201ENST00000223500 AMIGO3Q86WK7 504 aa20.82■□□□□ 0.92
CHMP5-201ENST00000223500 USP42Q9H9J4 1324 aaKnown RBP20.82■□□□□ 0.92
CHMP5-201ENST00000223500 SLC15A2Q16348 729 aa20.81■□□□□ 0.92
CHMP5-201ENST00000223500 MEIS3Q99687 375 aa20.81■□□□□ 0.92
CHMP5-201ENST00000223500 USP44Q9H0E7 712 aa20.81■□□□□ 0.92
CHMP5-201ENST00000223500 PPP4R2Q9NY27 417 aa20.81■□□□□ 0.92
CHMP5-201ENST00000223500 GRM8O00222 908 aa20.81■□□□□ 0.92
CHMP5-201ENST00000223500 UBTFL1P0CB47 393 aaPredicted RBP20.81■□□□□ 0.92
CHMP5-201ENST00000223500 SRP68Q9UHB9 627 aaKnown RBP20.81■□□□□ 0.92
CHMP5-201ENST00000223500 TUBGCP6Q96RT7 1819 aa20.8■□□□□ 0.92
CHMP5-201ENST00000223500 GNAI2P04899 355 aa20.8■□□□□ 0.92
CHMP5-201ENST00000223500 GPTP24298 496 aa20.8■□□□□ 0.92
CHMP5-201ENST00000223500 PARP10Q53GL7 1025 aa20.8■□□□□ 0.92
CHMP5-201ENST00000223500 ZNF34Q8IZ26 560 aa20.8■□□□□ 0.92
CHMP5-201ENST00000223500 MSH5O43196 834 aa20.79■□□□□ 0.92
CHMP5-201ENST00000223500 NIP7Q9Y221 180 aaKnown RBP eCLIP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms