RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ZNF428Q96B54 188 aa19.22■□□□□ 0.67
RPA3-201ENST00000223129 HLFQ16534 295 aa19.22■□□□□ 0.67
RPA3-201ENST00000223129 KIF6Q6ZMV9 814 aa19.22■□□□□ 0.67
RPA3-201ENST00000223129 FKBP8Q14318 412 aa19.21■□□□□ 0.67
RPA3-201ENST00000223129 ALDH1L2Q3SY69 923 aa19.21■□□□□ 0.67
RPA3-201ENST00000223129 SMC4Q9NTJ3 1288 aa19.21■□□□□ 0.67
RPA3-201ENST00000223129 ATF5Q9Y2D1 282 aaPredicted RBP19.21■□□□□ 0.67
RPA3-201ENST00000223129 MAP3K15Q6ZN16 1313 aa19.21■□□□□ 0.67
RPA3-201ENST00000223129 SLC16A10Q8TF71 515 aa19.2■□□□□ 0.66
RPA3-201ENST00000223129 CACNA1FO60840 1977 aa19.2■□□□□ 0.66
RPA3-201ENST00000223129 BCAR3O75815 825 aa19.2■□□□□ 0.66
RPA3-201ENST00000223129 FLIIQ13045 1269 aa19.2■□□□□ 0.66
RPA3-201ENST00000223129 ANKRD13DQ6ZTN6 518 aa19.2■□□□□ 0.66
RPA3-201ENST00000223129 ERVV-1B6SEH8 477 aa19.18■□□□□ 0.66
RPA3-201ENST00000223129 PLBD2Q8NHP8 589 aa19.18■□□□□ 0.66
RPA3-201ENST00000223129 MTFR1LQ9H019 292 aa19.18■□□□□ 0.66
RPA3-201ENST00000223129 BCORQ6W2J9 1755 aa19.18■□□□□ 0.66
RPA3-201ENST00000223129 FKBP5Q13451 457 aaPredicted RBP19.17■□□□□ 0.66
RPA3-201ENST00000223129 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
RPA3-201ENST00000223129 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
RPA3-201ENST00000223129 RIC3Q7Z5B4 369 aa19.17■□□□□ 0.66
RPA3-201ENST00000223129 NLGN1Q8N2Q7 840 aa19.17■□□□□ 0.66
RPA3-201ENST00000223129 SCN7AQ01118 1682 aa19.17■□□□□ 0.66
RPA3-201ENST00000223129 PI4KAP2A4QPH2 592 aa19.17■□□□□ 0.66
RPA3-201ENST00000223129 PI4KAP1Q8N8J0 262 aa19.17■□□□□ 0.66
RPA3-201ENST00000223129 NUP98P52948 1817 aa19.16■□□□□ 0.66
RPA3-201ENST00000223129 GIGYF2Q6Y7W6 1299 aaKnown RBP19.16■□□□□ 0.66
RPA3-201ENST00000223129 DDX58O95786 925 aaKnown RBP19.15■□□□□ 0.66
RPA3-201ENST00000223129 CLEC4GQ6UXB4 293 aa19.15■□□□□ 0.66
RPA3-201ENST00000223129 KSR2Q6VAB6 950 aa19.15■□□□□ 0.66
RPA3-201ENST00000223129 NOB1Q9ULX3 412 aaKnown RBP19.15■□□□□ 0.66
RPA3-201ENST00000223129 ZNF652Q9Y2D9 606 aa19.15■□□□□ 0.66
RPA3-201ENST00000223129 MAP3K2Q9Y2U5 619 aa19.15■□□□□ 0.66
RPA3-201ENST00000223129 NFIXQ14938 502 aa19.15■□□□□ 0.66
RPA3-201ENST00000223129 ADCY9O60503 1353 aa19.14■□□□□ 0.66
RPA3-201ENST00000223129 F6X3S4 739 aa19.14■□□□□ 0.65
RPA3-201ENST00000223129 TM4SF1P30408 202 aa19.14■□□□□ 0.65
RPA3-201ENST00000223129 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
RPA3-201ENST00000223129 MMP10P09238 476 aa19.13■□□□□ 0.65
RPA3-201ENST00000223129 GPTP24298 496 aa19.13■□□□□ 0.65
RPA3-201ENST00000223129 BRPF1P55201 1214 aaPredicted RBP19.13■□□□□ 0.65
RPA3-201ENST00000223129 ARFGEF2Q9Y6D5 1785 aa19.13■□□□□ 0.65
RPA3-201ENST00000223129 NIP7Q9Y221 180 aaKnown RBP eCLIP19.13■□□□□ 0.65
RPA3-201ENST00000223129 ATP5J2-PTCD1G3V325 749 aa19.12■□□□□ 0.65
RPA3-201ENST00000223129 DDR1Q08345 913 aa19.12■□□□□ 0.65
RPA3-201ENST00000223129 TCIRG1Q13488 830 aa19.12■□□□□ 0.65
RPA3-201ENST00000223129 FRAT1Q92837 279 aaPredicted RBP19.12■□□□□ 0.65
RPA3-201ENST00000223129 MYD88Q99836 296 aa19.12■□□□□ 0.65
RPA3-201ENST00000223129 SPON1Q9HCB6 807 aa19.12■□□□□ 0.65
RPA3-201ENST00000223129 PTGER2P43116 358 aa19.12■□□□□ 0.65
RPA3-201ENST00000223129 SETDB2Q96T68 719 aa19.12■□□□□ 0.65
RPA3-201ENST00000223129 SRCAPQ6ZRS2 3230 aa19.11■□□□□ 0.65
RPA3-201ENST00000223129 FAM177BA6PVY3 158 aa19.11■□□□□ 0.65
RPA3-201ENST00000223129 RGL2O15211 777 aa19.11■□□□□ 0.65
RPA3-201ENST00000223129 ZNF34Q8IZ26 560 aa19.11■□□□□ 0.65
RPA3-201ENST00000223129 DNAAF4Q8WXU2 420 aa19.11■□□□□ 0.65
RPA3-201ENST00000223129 SGIP1Q9BQI5 828 aa19.11■□□□□ 0.65
RPA3-201ENST00000223129 METTL22Q9BUU2 404 aaPredicted RBP19.11■□□□□ 0.65
RPA3-201ENST00000223129 PTPRCP08575 1304 aa19.11■□□□□ 0.65
RPA3-201ENST00000223129 UBN2Q6ZU65 1347 aa19.1■□□□□ 0.65
RPA3-201ENST00000223129 POLRMTO00411 1230 aaKnown RBP19.1■□□□□ 0.65
RPA3-201ENST00000223129 HSP90AB3PQ58FF7 597 aa19.1■□□□□ 0.65
RPA3-201ENST00000223129 COL24A1Q17RW2 1714 aa19.09■□□□□ 0.65
RPA3-201ENST00000223129 ATP10DQ9P241 1426 aa19.09■□□□□ 0.65
RPA3-201ENST00000223129 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
RPA3-201ENST00000223129 POLD1P28340 1107 aa19.09■□□□□ 0.65
RPA3-201ENST00000223129 SLC4A10Q6U841 1118 aa19.09■□□□□ 0.65
RPA3-201ENST00000223129 TNNQ9UQP3 1299 aa19.09■□□□□ 0.65
RPA3-201ENST00000223129 PARP3Q9Y6F1 533 aa19.09■□□□□ 0.65
RPA3-201ENST00000223129 SERPINB2P05120 415 aa19.08■□□□□ 0.65
RPA3-201ENST00000223129 ISCA1Q9BUE6 129 aa19.08■□□□□ 0.65
RPA3-201ENST00000223129 SUSD4Q5VX71 490 aa19.08■□□□□ 0.64
RPA3-201ENST00000223129 ANKRD36CQ5JPF3 1778 aa19.08■□□□□ 0.64
RPA3-201ENST00000223129 IGKV5-2P06315 115 aa19.07■□□□□ 0.64
RPA3-201ENST00000223129 CWF19L2Q2TBE0 894 aaKnown RBP19.07■□□□□ 0.64
RPA3-201ENST00000223129 NLRP10Q86W26 655 aa19.07■□□□□ 0.64
RPA3-201ENST00000223129 NEXNQ0ZGT2 675 aa19.07■□□□□ 0.64
RPA3-201ENST00000223129 CCDC24Q8N4L8 307 aa19.07■□□□□ 0.64
RPA3-201ENST00000223129 CARMIL3Q8ND23 1372 aa19.06■□□□□ 0.64
RPA3-201ENST00000223129 IPO8O15397 1037 aaKnown RBP19.06■□□□□ 0.64
RPA3-201ENST00000223129 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
RPA3-201ENST00000223129 PLIN1O60240 522 aa19.05■□□□□ 0.64
RPA3-201ENST00000223129 TRIM27P14373 513 aa19.05■□□□□ 0.64
RPA3-201ENST00000223129 BEND3Q5T5X7 828 aa19.05■□□□□ 0.64
RPA3-201ENST00000223129 ZKSCAN2Q63HK3 967 aa19.05■□□□□ 0.64
RPA3-201ENST00000223129 ATF7IPQ6VMQ6 1270 aa19.05■□□□□ 0.64
RPA3-201ENST00000223129 NBPF5PQ86XG9 351 aaPredicted RBP19.05■□□□□ 0.64
RPA3-201ENST00000223129 CLUAP1Q96AJ1 413 aa19.05■□□□□ 0.64
RPA3-201ENST00000223129 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
RPA3-201ENST00000223129 AFDNP55196 1824 aaKnown RBP19.05■□□□□ 0.64
RPA3-201ENST00000223129 TRIM28Q13263 835 aaKnown RBP19.05■□□□□ 0.64
RPA3-201ENST00000223129 PARP10Q53GL7 1025 aa19.05■□□□□ 0.64
RPA3-201ENST00000223129 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
RPA3-201ENST00000223129 NEURL1BA8MQ27 555 aa19.04■□□□□ 0.64
RPA3-201ENST00000223129 NUTM1Q86Y26 1132 aa19.04■□□□□ 0.64
RPA3-201ENST00000223129 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
RPA3-201ENST00000223129 PRR5LQ6MZQ0 368 aa19.03■□□□□ 0.64
RPA3-201ENST00000223129 SYNE4Q8N205 404 aa19.03■□□□□ 0.64
RPA3-201ENST00000223129 LINS1Q8NG48 757 aa19.03■□□□□ 0.64
RPA3-201ENST00000223129 JARID2Q92833 1246 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms