RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
H2AFV-201ENST00000222690 LMOD2Q6P5Q4 547 aa20.55■□□□□ 0.88
H2AFV-201ENST00000222690 GPATCH3Q96I76 525 aa20.55■□□□□ 0.88
H2AFV-201ENST00000222690 TFIP11Q9UBB9 837 aaKnown RBP20.55■□□□□ 0.88
H2AFV-201ENST00000222690 CCDC8Q9H0W5 538 aaPredicted RBP20.54■□□□□ 0.88
H2AFV-201ENST00000222690 TSPOAP1O95153 1857 aa20.54■□□□□ 0.88
H2AFV-201ENST00000222690 HSP90AB4PQ58FF6 505 aa20.54■□□□□ 0.88
H2AFV-201ENST00000222690 MPRIPQ6WCQ1 1025 aa20.54■□□□□ 0.88
H2AFV-201ENST00000222690 TTC14Q96N46 770 aa20.54■□□□□ 0.88
H2AFV-201ENST00000222690 TNRQ92752 1358 aa20.54■□□□□ 0.88
H2AFV-201ENST00000222690 RIMBP3CA6NJZ7 1639 aa20.54■□□□□ 0.88
H2AFV-201ENST00000222690 RIMBP3BA6NNM3 1639 aa20.54■□□□□ 0.88
H2AFV-201ENST00000222690 RIMBP3Q9UFD9 1639 aa20.54■□□□□ 0.88
H2AFV-201ENST00000222690 CHAF1AQ13111 956 aaPredicted RBP20.54■□□□□ 0.88
H2AFV-201ENST00000222690 CCDC9Q9Y3X0 531 aaKnown RBP20.53■□□□□ 0.88
H2AFV-201ENST00000222690 HYPKQ9NX55 129 aa20.53■□□□□ 0.88
H2AFV-201ENST00000222690 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
H2AFV-201ENST00000222690 CEP170BQ9Y4F5 1589 aaPredicted RBP20.53■□□□□ 0.88
H2AFV-201ENST00000222690 AOX1Q06278 1338 aa20.53■□□□□ 0.88
H2AFV-201ENST00000222690 CWF19L2Q2TBE0 894 aaKnown RBP20.52■□□□□ 0.88
H2AFV-201ENST00000222690 TMEM2Q9UHN6 1383 aa20.52■□□□□ 0.88
H2AFV-201ENST00000222690 CCDC192P0DO97 292 aa20.52■□□□□ 0.88
H2AFV-201ENST00000222690 ECHDC1Q9NTX5 307 aa20.52■□□□□ 0.88
H2AFV-201ENST00000222690 MTMR6Q9Y217 621 aa20.52■□□□□ 0.88
H2AFV-201ENST00000222690 HTATSF1O43719 755 aaKnown RBP20.52■□□□□ 0.87
H2AFV-201ENST00000222690 FOSBP53539 338 aa20.52■□□□□ 0.87
H2AFV-201ENST00000222690 MTERF4Q7Z6M4 381 aaKnown RBP20.52■□□□□ 0.87
H2AFV-201ENST00000222690 MYRIPQ8NFW9 859 aa20.52■□□□□ 0.87
H2AFV-201ENST00000222690 FAM227BQ96M60 508 aa20.52■□□□□ 0.87
H2AFV-201ENST00000222690 BOLA2Q9H3K6 86 aa20.52■□□□□ 0.87
H2AFV-201ENST00000222690 ME3Q16798 604 aa20.51■□□□□ 0.87
H2AFV-201ENST00000222690 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
H2AFV-201ENST00000222690 HMGN5P82970 282 aaKnown RBP20.51■□□□□ 0.87
H2AFV-201ENST00000222690 KIF3AQ9Y496 699 aa20.51■□□□□ 0.87
H2AFV-201ENST00000222690 RBM8AQ9Y5S9 174 aaKnown RBP20.51■□□□□ 0.87
H2AFV-201ENST00000222690 ITSN1Q15811 1721 aa20.5■□□□□ 0.87
H2AFV-201ENST00000222690 CBX1P83916 185 aa20.5■□□□□ 0.87
H2AFV-201ENST00000222690 FSD1Q9BTV5 496 aa20.5■□□□□ 0.87
H2AFV-201ENST00000222690 MAP3K2Q9Y2U5 619 aa20.5■□□□□ 0.87
H2AFV-201ENST00000222690 KRT85P78386 507 aa20.5■□□□□ 0.87
H2AFV-201ENST00000222690 POLA2Q14181 598 aa20.5■□□□□ 0.87
H2AFV-201ENST00000222690 USP31Q70CQ4 1352 aa20.5■□□□□ 0.87
H2AFV-201ENST00000222690 BEND3Q5T5X7 828 aa20.49■□□□□ 0.87
H2AFV-201ENST00000222690 LUZP1Q86V48 1076 aa20.49■□□□□ 0.87
H2AFV-201ENST00000222690 C3P01024 1663 aa20.49■□□□□ 0.87
H2AFV-201ENST00000222690 ZNF530Q6P9A1 599 aaPredicted RBP20.49■□□□□ 0.87
H2AFV-201ENST00000222690 NUP62CLQ9H1M0 184 aa20.49■□□□□ 0.87
H2AFV-201ENST00000222690 PYCARDQ9ULZ3 195 aa20.49■□□□□ 0.87
H2AFV-201ENST00000222690 GOLGA6L6A8MZA4 724 aa20.49■□□□□ 0.87
H2AFV-201ENST00000222690 CEBPZQ03701 1054 aaKnown RBP20.49■□□□□ 0.87
H2AFV-201ENST00000222690 CDC37L1Q7L3B6 337 aa20.49■□□□□ 0.87
H2AFV-201ENST00000222690 FGD1P98174 961 aa20.48■□□□□ 0.87
H2AFV-201ENST00000222690 BICD2Q8TD16 824 aa20.48■□□□□ 0.87
H2AFV-201ENST00000222690 KDRP35968 1356 aa20.48■□□□□ 0.87
H2AFV-201ENST00000222690 G3BP1Q13283 466 aaKnown RBP eCLIP20.48■□□□□ 0.87
H2AFV-201ENST00000222690 TMEM87AQ8NBN3 555 aa20.48■□□□□ 0.87
H2AFV-201ENST00000222690 NAP1L2Q9ULW6 460 aaPredicted RBP20.48■□□□□ 0.87
H2AFV-201ENST00000222690 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
H2AFV-201ENST00000222690 TPCN1Q9ULQ1 816 aa20.48■□□□□ 0.87
H2AFV-201ENST00000222690 PEAK1Q9H792 1746 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 LRRC59Q96AG4 307 aaKnown RBP20.47■□□□□ 0.87
H2AFV-201ENST00000222690 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
H2AFV-201ENST00000222690 TNMDQ9H2S6 317 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 AP5Z1O43299 807 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 LIG1P18858 919 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 EIF4A1P60842 406 aaKnown RBP20.47■□□□□ 0.87
H2AFV-201ENST00000222690 MAP3K11Q16584 847 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 VPS53Q5VIR6 699 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 NMIQ13287 307 aaPredicted RBP20.47■□□□□ 0.87
H2AFV-201ENST00000222690 COL9A3Q14050 684 aaPredicted RBP20.47■□□□□ 0.87
H2AFV-201ENST00000222690 CREB3L3Q68CJ9 461 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 TTC6Q86TZ1 520 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 KLHDC4Q8TBB5 520 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 PRIMPOLQ96LW4 560 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 TRIM5Q9C035 493 aa20.47■□□□□ 0.87
H2AFV-201ENST00000222690 SH2B1Q9NRF2 756 aaPredicted RBP20.47■□□□□ 0.87
H2AFV-201ENST00000222690 HSP90B1P14625 803 aaKnown RBP20.46■□□□□ 0.87
H2AFV-201ENST00000222690 PTGS1P23219 599 aa20.46■□□□□ 0.87
H2AFV-201ENST00000222690 BLOC1S2Q6QNY1 142 aa20.46■□□□□ 0.87
H2AFV-201ENST00000222690 DACT1Q9NYF0 836 aa20.46■□□□□ 0.87
H2AFV-201ENST00000222690 PPFIA3O75145 1194 aa20.46■□□□□ 0.87
H2AFV-201ENST00000222690 SPATA32Q96LK8 384 aa20.46■□□□□ 0.87
H2AFV-201ENST00000222690 ZHX1Q9UKY1 873 aaPredicted RBP20.46■□□□□ 0.87
H2AFV-201ENST00000222690 CCDC171Q6TFL3 1326 aa20.45■□□□□ 0.86
H2AFV-201ENST00000222690 SPDYE4A6NLX3 237 aa20.45■□□□□ 0.86
H2AFV-201ENST00000222690 PROSER3Q2NL68 480 aa20.45■□□□□ 0.86
H2AFV-201ENST00000222690 PPP4R3BQ5MIZ7 849 aa20.45■□□□□ 0.86
H2AFV-201ENST00000222690 NBPF6Q5VWK0 638 aa20.45■□□□□ 0.86
H2AFV-201ENST00000222690 NBPF4Q96M43 638 aa20.45■□□□□ 0.86
H2AFV-201ENST00000222690 DDX11Q96FC9 970 aa20.44■□□□□ 0.86
H2AFV-201ENST00000222690 SPATA31D1Q6ZQQ2 1576 aa20.44■□□□□ 0.86
H2AFV-201ENST00000222690 SETD1BQ9UPS6 1966 aaKnown RBP20.44■□□□□ 0.86
H2AFV-201ENST00000222690 TECPR2O15040 1411 aa20.44■□□□□ 0.86
H2AFV-201ENST00000222690 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
H2AFV-201ENST00000222690 PRAMEF22A3QJZ6 481 aa20.44■□□□□ 0.86
H2AFV-201ENST00000222690 FBXW7Q969H0 707 aa20.44■□□□□ 0.86
H2AFV-201ENST00000222690 EVI5LQ96CN4 794 aa20.44■□□□□ 0.86
H2AFV-201ENST00000222690 EDC3Q96F86 508 aaKnown RBP20.44■□□□□ 0.86
H2AFV-201ENST00000222690 NRXN3Q9Y4C0 1643 aa20.44■□□□□ 0.86
H2AFV-201ENST00000222690 C16orf45Q96MC5 204 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms