RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 SETDB2Q96T68 719 aa15.03■□□□□ -0
NME1-201ENST00000013034 IQCA1LA6NCM1 817 aa15.02■□□□□ -0
NME1-201ENST00000013034 SRGNP10124 158 aa15.02■□□□□ -0
NME1-201ENST00000013034 IL17REQ8NFR9 667 aa15.02■□□□□ -0
NME1-201ENST00000013034 MASTLQ96GX5 879 aa15.02■□□□□ -0
NME1-201ENST00000013034 CNTNAP1P78357 1384 aa15.01□□□□□ -0.01
NME1-201ENST00000013034 PER1O15534 1290 aaPredicted RBP15.01□□□□□ -0.01
NME1-201ENST00000013034 DDNO94850 711 aaPredicted RBP15.01□□□□□ -0.01
NME1-201ENST00000013034 DZIP3Q86Y13 1208 aaKnown RBP15.01□□□□□ -0.01
NME1-201ENST00000013034 CCDC24Q8N4L8 307 aa15.01□□□□□ -0.01
NME1-201ENST00000013034 L3MBTL3Q96JM7 780 aaPredicted RBP15.01□□□□□ -0.01
NME1-201ENST00000013034 U2SURPO15042 1029 aaKnown RBP15□□□□□ -0.01
NME1-201ENST00000013034 POTEIP0CG38 1075 aa15□□□□□ -0.01
NME1-201ENST00000013034 POTEJP0CG39 1038 aa15□□□□□ -0.01
NME1-201ENST00000013034 CCDC93Q567U6 631 aa15□□□□□ -0.01
NME1-201ENST00000013034 CC2D1BQ5T0F9 858 aaKnown RBP15□□□□□ -0.01
NME1-201ENST00000013034 LDHDQ86WU2 507 aa15□□□□□ -0.01
NME1-201ENST00000013034 MKRN1Q9UHC7 482 aaKnown RBP15□□□□□ -0.01
NME1-201ENST00000013034 PASKQ96RG2 1323 aa14.99□□□□□ -0.01
NME1-201ENST00000013034 A1BGP04217 495 aa14.99□□□□□ -0.01
NME1-201ENST00000013034 CLEC4GQ6UXB4 293 aa14.99□□□□□ -0.01
NME1-201ENST00000013034 ZNF652Q9Y2D9 606 aa14.99□□□□□ -0.01
NME1-201ENST00000013034 SLX4Q8IY92 1834 aa14.99□□□□□ -0.01
NME1-201ENST00000013034 RGL2O15211 777 aa14.98□□□□□ -0.01
NME1-201ENST00000013034 SCN4AP35499 1836 aa14.98□□□□□ -0.01
NME1-201ENST00000013034 CACNA1SQ13698 1873 aa14.97□□□□□ -0.01
NME1-201ENST00000013034 BTBD11A6QL63 1104 aa14.97□□□□□ -0.01
NME1-201ENST00000013034 NPR1P16066 1061 aa14.97□□□□□ -0.01
NME1-201ENST00000013034 FKBP4Q02790 459 aaKnown RBP eCLIP14.97□□□□□ -0.01
NME1-201ENST00000013034 NBPF5PQ86XG9 351 aaPredicted RBP14.97□□□□□ -0.01
NME1-201ENST00000013034 C7orf43Q8WVR3 580 aa14.97□□□□□ -0.01
NME1-201ENST00000013034 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
NME1-201ENST00000013034 PRDM10Q9NQV6 1147 aa14.96□□□□□ -0.01
NME1-201ENST00000013034 ADAMTSL1Q8N6G6 1762 aa14.96□□□□□ -0.02
NME1-201ENST00000013034 KLRG2A4D1S0 409 aaPredicted RBP14.95□□□□□ -0.02
NME1-201ENST00000013034 FOXN1O15353 648 aa14.95□□□□□ -0.02
NME1-201ENST00000013034 ZNF541Q9H0D2 1346 aa14.94□□□□□ -0.02
NME1-201ENST00000013034 TMEM88BA6NKF7 163 aa14.94□□□□□ -0.02
NME1-201ENST00000013034 KCNQ3O43525 872 aa14.94□□□□□ -0.02
NME1-201ENST00000013034 PRKAR2BP31323 418 aa14.94□□□□□ -0.02
NME1-201ENST00000013034 AIDAQ96BJ3 306 aa14.94□□□□□ -0.02
NME1-201ENST00000013034 RSPH6AQ9H0K4 717 aa14.94□□□□□ -0.02
NME1-201ENST00000013034 HACL1Q9UJ83 578 aa14.94□□□□□ -0.02
NME1-201ENST00000013034 USP16Q9Y5T5 823 aa14.94□□□□□ -0.02
NME1-201ENST00000013034 SNRPA1P09661 255 aaKnown RBP14.93□□□□□ -0.02
NME1-201ENST00000013034 PIP4K2AP48426 406 aaPredicted RBP14.93□□□□□ -0.02
NME1-201ENST00000013034 CTCFP49711 727 aaPredicted RBP14.93□□□□□ -0.02
NME1-201ENST00000013034 RTKN2Q8IZC4 609 aa14.93□□□□□ -0.02
NME1-201ENST00000013034 CFAP53Q96M91 514 aa14.93□□□□□ -0.02
NME1-201ENST00000013034 ZNF277Q9NRM2 450 aaPredicted RBP14.93□□□□□ -0.02
NME1-201ENST00000013034 EAPPQ56P03 285 aaPredicted RBP14.92□□□□□ -0.02
NME1-201ENST00000013034 TPTE2Q6XPS3 522 aa14.92□□□□□ -0.02
NME1-201ENST00000013034 PNMA8AQ86V59 439 aaPredicted RBP14.92□□□□□ -0.02
NME1-201ENST00000013034 PHACTR3Q96KR7 559 aa14.92□□□□□ -0.02
NME1-201ENST00000013034 NIP7Q9Y221 180 aaKnown RBP eCLIP14.92□□□□□ -0.02
NME1-201ENST00000013034 SNED1Q8TER0 1413 aa14.92□□□□□ -0.02
NME1-201ENST00000013034 ITGBL1O95965 494 aaPredicted RBP14.91□□□□□ -0.02
NME1-201ENST00000013034 EPHX2P34913 555 aa14.91□□□□□ -0.02
NME1-201ENST00000013034 VEGFBP49765 207 aa14.91□□□□□ -0.02
NME1-201ENST00000013034 RTF1Q92541 710 aaKnown RBP14.91□□□□□ -0.02
NME1-201ENST00000013034 RNF123Q5XPI4 1314 aa14.91□□□□□ -0.02
NME1-201ENST00000013034 LAMB4A4D0S4 1761 aa14.9□□□□□ -0.02
NME1-201ENST00000013034 PRAMEF22A3QJZ6 481 aa14.9□□□□□ -0.02
NME1-201ENST00000013034 RASSF10A6NK89 507 aa14.9□□□□□ -0.02
NME1-201ENST00000013034 FZD9O00144 591 aa14.9□□□□□ -0.02
NME1-201ENST00000013034 ALDH1B1P30837 517 aa14.9□□□□□ -0.02
NME1-201ENST00000013034 IARSP41252 1262 aaKnown RBP14.9□□□□□ -0.02
NME1-201ENST00000013034 NUDCQ9Y266 331 aa14.9□□□□□ -0.02
NME1-201ENST00000013034 RIC1Q4ADV7 1423 aa14.9□□□□□ -0.02
NME1-201ENST00000013034 GPC2Q8N158 579 aa14.89□□□□□ -0.03
NME1-201ENST00000013034 PSMD1Q99460 953 aa14.89□□□□□ -0.03
NME1-201ENST00000013034 WBP1LQ9NX94 342 aa14.89□□□□□ -0.03
NME1-201ENST00000013034 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
NME1-201ENST00000013034 THSD7BQ9C0I4 1608 aa14.88□□□□□ -0.03
NME1-201ENST00000013034 ABCC12Q96J65 1359 aa14.88□□□□□ -0.03
NME1-201ENST00000013034 IBTKQ9P2D0 1353 aaPredicted RBP14.88□□□□□ -0.03
NME1-201ENST00000013034 NBPF26B4DH59 902 aa14.88□□□□□ -0.03
NME1-201ENST00000013034 NBPF10Q6P3W6 841 aaKnown RBP14.88□□□□□ -0.03
NME1-201ENST00000013034 OLFM4Q6UX06 510 aa14.88□□□□□ -0.03
NME1-201ENST00000013034 MCM10Q7L590 875 aa14.88□□□□□ -0.03
NME1-201ENST00000013034 NBPF15Q8N660 670 aa14.88□□□□□ -0.03
NME1-201ENST00000013034 NYXQ9GZU5 481 aa14.88□□□□□ -0.03
NME1-201ENST00000013034 HTATSF1O43719 755 aaKnown RBP14.87□□□□□ -0.03
NME1-201ENST00000013034 GTF2E1P29083 439 aaPredicted RBP14.87□□□□□ -0.03
NME1-201ENST00000013034 CNGB1Q14028 1251 aaPredicted RBP14.87□□□□□ -0.03
NME1-201ENST00000013034 CRY2Q49AN0 593 aa14.87□□□□□ -0.03
NME1-201ENST00000013034 CC2D2BQ6DHV5 1058 aa14.87□□□□□ -0.03
NME1-201ENST00000013034 CNTROBQ8N137 903 aa14.87□□□□□ -0.03
NME1-201ENST00000013034 SYNE4Q8N205 404 aa14.87□□□□□ -0.03
NME1-201ENST00000013034 JDP2Q8WYK2 163 aa14.87□□□□□ -0.03
NME1-201ENST00000013034 FAM177BA6PVY3 158 aa14.86□□□□□ -0.03
NME1-201ENST00000013034 U2AF1L5P0DN76 240 aaPredicted RBP14.86□□□□□ -0.03
NME1-201ENST00000013034 U2AF1Q01081 240 aaKnown RBP eCLIP14.86□□□□□ -0.03
NME1-201ENST00000013034 DEFB115Q30KQ5 88 aa14.86□□□□□ -0.03
NME1-201ENST00000013034 MAP1SQ66K74 1059 aaPredicted RBP14.86□□□□□ -0.03
NME1-201ENST00000013034 LBX1P52954 281 aa14.85□□□□□ -0.03
NME1-201ENST00000013034 EIF6P56537 245 aaKnown RBP14.85□□□□□ -0.03
NME1-201ENST00000013034 MAP2K1Q02750 393 aaPredicted RBP14.85□□□□□ -0.03
NME1-201ENST00000013034 HLFQ16534 295 aa14.85□□□□□ -0.03
NME1-201ENST00000013034 GRIPAP1Q4V328 841 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms