RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Nsfl1cQ9CZ44 370 aaKnown RBP17.77■□□□□ 0.44
Rnf4-207ENSMUST00000182709 Catsper2A2ARP9 588 aa17.77■□□□□ 0.44
Rnf4-207ENSMUST00000182709 Zbtb3Q91X45 518 aa17.77■□□□□ 0.44
Rnf4-207ENSMUST00000182709 Nucb1Q02819 459 aaKnown RBP17.77■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Exoc5Q3TPX4 708 aa17.77■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Chmp3Q9CQ10 224 aa17.77■□□□□ 0.43
Rnf4-207ENSMUST00000182709 EspnlQ3UYR4 1005 aa17.76■□□□□ 0.43
Rnf4-207ENSMUST00000182709 MypnQ5DTJ9 1315 aa17.76■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Paxip1Q6NZQ4 1056 aa17.76■□□□□ 0.43
Rnf4-207ENSMUST00000182709 DccP70211 1447 aa17.75■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Ccdc129Q14B48 1034 aa17.75■□□□□ 0.43
Rnf4-207ENSMUST00000182709 4933402E13RikQ9D4D2 429 aa17.75■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Bsdc1Q80Y55 427 aa17.75■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Q8C5K5 320 aa17.75■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Ttc19Q8CC21 365 aa17.75■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Kif20aP97329 887 aa17.74■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Nip7Q9CXK8 180 aaKnown RBP17.74■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Slfnl1Q8BHW9 410 aa17.74■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Ankle2Q6P1H6 964 aa17.74■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Brf1Q8CFK2 676 aa17.74■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Lrrc59Q922Q8 307 aaKnown RBP17.74■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Strn4P58404 760 aa17.73■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Slc26a8Q8R0C3 999 aa17.73■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Sik1Q60670 779 aa17.73■□□□□ 0.43
Rnf4-207ENSMUST00000182709 HellsQ60848 821 aa17.73■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Zeb2Q9R0G7 1215 aa17.73■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Il1rapl2Q9ERS6 686 aa17.72■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Slc5a4bQ91ZP4 660 aa17.72■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Antxr1Q9CZ52 562 aa17.72■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Col4a1P02463 1669 aa17.72■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Erc2Q6PH08 957 aa17.72■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Ripor2Q80U16 1078 aa17.72■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Fam84aQ9D650 292 aa17.72■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Hdac6Q9Z2V5 1149 aa17.72■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Phactr2B1AVP0 632 aa17.71■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Terf2O35144 541 aa17.71■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Gm12185Q5NCB2 835 aa17.71■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Dcaf5Q80T85 946 aa17.71■□□□□ 0.43
Rnf4-207ENSMUST00000182709 Eif3aP23116 1344 aaKnown RBP17.7■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Myd88P22366 296 aa17.7■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Sgsm1Q8BPQ7 1093 aa17.7■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Anapc15-psA0A140T8L6 141 aa17.7■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Unc5clQ6R653 518 aa17.7■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Jakmip1Q8BVL9 626 aa17.7■□□□□ 0.42
Rnf4-207ENSMUST00000182709 GptQ8QZR5 496 aa17.7■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Il4rP16382 810 aa17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Zbtb40Q6PCS8 1258 aa17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Miga2Q8BK03 593 aa17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Abca15E9PWH4 1668 aa17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Gm10093D3YYI8 482 aa17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Hdac1O09106 482 aaKnown RBP17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Rrs1Q9CYH6 365 aaKnown RBP17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Mcm4P49717 862 aa17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Ltb4r2Q9JJL9 360 aa17.69■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Cct4P80315 539 aaKnown RBP17.68■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Bcl9lQ67FY2 1494 aa17.68■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Bicdl1A0JNT9 577 aa17.68■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Ddb1Q3U1J4 1140 aaKnown RBP17.68■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Ddx58Q6Q899 926 aa17.68■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Stard3nlQ9DCI3 235 aa17.68■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Nol8Q3UHX0 1147 aaKnown RBP17.67■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Vsig10D3YX43 558 aa17.66■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Mum1Q6DID5 682 aa17.66■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Ssh1Q76I79 1042 aa17.66■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Ankrd23Q812A3 306 aa17.66■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Cwc25Q9DBF7 416 aa17.66■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Akap11E9Q777 1895 aa17.66■□□□□ 0.42
Rnf4-207ENSMUST00000182709 ScaperF8VQ70 1398 aaKnown RBP17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Gnat3Q3V3I2 354 aa17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Fam228bQ497Q6 232 aa17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Nlrp9bQ66X22 1003 aa17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Trim52Q8CDV4 233 aa17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Dis3l2Q8CI75 870 aaKnown RBP17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Zbtb1Q91VL9 713 aa17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Timm10P62073 90 aa17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Mlh1Q9JK91 760 aa17.65■□□□□ 0.42
Rnf4-207ENSMUST00000182709 Golgb1E9PVZ8 3238 aa17.64■□□□□ 0.42
Rnf4-207ENSMUST00000182709 VgfQ0VGU4 617 aa17.64■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Tnks1bp1P58871 1720 aa17.64■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Kcnh4A2A5F7 1018 aa17.64■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Anxa1P10107 346 aaKnown RBP17.64■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Taf5lQ91WQ5 589 aa17.64■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Bag3Q9JLV1 577 aaKnown RBP17.64■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Plcb2A3KGF7 1181 aa17.63■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Zkscan16A2ALW2 728 aa17.63■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Abcc4E9Q236 1325 aa17.63■□□□□ 0.41
Rnf4-207ENSMUST00000182709 F2rP30558 430 aa17.63■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Jmjd4Q8BFT6 427 aa17.63■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Pmfbp1Q9WVQ0 1022 aa17.63■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Ltv1Q6NSQ7 470 aaKnown RBP17.62■□□□□ 0.41
Rnf4-207ENSMUST00000182709 EngaseQ8BX80 734 aa17.62■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Crb1Q8VHS2 1405 aa17.62■□□□□ 0.41
Rnf4-207ENSMUST00000182709 FocadA2AKG8 1798 aa17.61■□□□□ 0.41
Rnf4-207ENSMUST00000182709 InsrrQ9WTL4 1300 aa17.61■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Vps54Q5SPW0 977 aa17.61■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Rrp12Q6P5B0 1295 aaKnown RBP17.6■□□□□ 0.41
Rnf4-207ENSMUST00000182709 DekQ7TNV0 380 aaKnown RBP17.6■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Sf3a1Q8K4Z5 791 aaKnown RBP17.6■□□□□ 0.41
Rnf4-207ENSMUST00000182709 AK157302I3ITR1 129 aa17.59■□□□□ 0.41
Rnf4-207ENSMUST00000182709 Nol10Q5RJG1 687 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms