RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Q9D9S1 216 aa19.25■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Col15a1O35206 1367 aa19.25■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Abcc4E9Q236 1325 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 GpkowQ56A08 488 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Ddx11Q6AXC6 880 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Casc1Q6TDU8 730 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Tsr2Q8C8T8 191 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Pdia6Q922R8 440 aaKnown RBP19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Rtn4Q99P72 1162 aaKnown RBP19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 LratQ9JI60 231 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Dlg5E9Q9R9 1921 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 NmiO35309 314 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 CrklP47941 303 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Dhx38Q80X98 1228 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 TnrQ8BYI9 1358 aa19.24■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Rbm8a2A0A0N4SUH6 174 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Mdm2P23804 489 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Syt1P46096 421 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Samm50Q8BGH2 469 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Rbm8aQ9CWZ3 174 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Ccdc7Q9D541 371 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Zfp804bA0A0G2JGH6 1343 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Pank2Q3U4S0 443 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Adora1Q60612 326 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Ddx19aQ61655 478 aaKnown RBP19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Pcdh10E9PXQ7 1057 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Dhx16G3X8X0 1044 aaKnown RBP19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Rrp12Q6P5B0 1295 aaKnown RBP19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Phkg2Q9DB30 406 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Stx6Q9JKK1 255 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 TefQ9JLC6 301 aa19.23■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Eif3aP23116 1344 aaKnown RBP19.22■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Polr3dQ91WD1 398 aa19.22■□□□□ 0.67
Ckap4-201ENSMUST00000053871 CgnP59242 1191 aa19.22■□□□□ 0.67
Ckap4-201ENSMUST00000053871 VgfQ0VGU4 617 aa19.22■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Rcan3Q9JKK0 239 aa19.22■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Bag3Q9JLV1 577 aaKnown RBP19.22■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Pkp1P97350 728 aaKnown RBP19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Tmem119Q8R138 280 aa19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Chd1lQ9CXF7 900 aa19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Col14a1Q80X19 1797 aa19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Flt4P35917 1363 aa19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Atp10bB1AWN4 1474 aa19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Ak2Q9WTP6 239 aa19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Q8C5K5 320 aa19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Mrpl50Q8VDT9 159 aaKnown RBP19.21■□□□□ 0.67
Ckap4-201ENSMUST00000053871 Rims2Q9EQZ7 1530 aa19.21■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Sf3a1Q8K4Z5 791 aaKnown RBP19.2■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Ugt1a5B2RT14 529 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Mcm3P25206 812 aaKnown RBP19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Atf3Q60765 181 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 DpydQ8CHR6 1025 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Speer4bQ9D9F7 267 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Larp1Q6ZQ58 1072 aaKnown RBP19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Asic4Q7TNS7 539 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Ddrgk1Q80WW9 315 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Olfml1Q8BSH2 233 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Ccar2Q8VDP4 922 aaKnown RBP19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Zscan25B2RX31 543 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Bach1P97302 739 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Soga3Q6NZL0 945 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Add2Q9QYB8 725 aa19.19■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Ppfia3P60469 1194 aa19.18■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Gm21663A0A0G2JE01 267 aa19.18■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Gm7361D3Z6R1 267 aa19.18■□□□□ 0.66
Ckap4-201ENSMUST00000053871 5031410I06RikE9Q4E0 267 aa19.18■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Gm1979E9QAN3 267 aa19.18■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Gm5862K7N5V5 267 aa19.18■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Gm10220K7N660 267 aa19.18■□□□□ 0.66
Ckap4-201ENSMUST00000053871 HellsQ60848 821 aa19.18■□□□□ 0.66
Ckap4-201ENSMUST00000053871 FosbP13346 338 aa19.17■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Clcn1Q64347 994 aa19.17■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Ccdc66Q6NS45 935 aa19.17■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Pip4k2bQ80XI4 416 aa19.17■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Rassf8Q8CJ96 419 aa19.17■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Iqsec3Q3TES0 1195 aa19.16■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Chmp3Q9CQ10 224 aa19.16■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Vps54Q5SPW0 977 aa19.16■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Ppm1mQ8BU27 406 aa19.16■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Glipr1l2Q9CQ35 332 aa19.16■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Ddx46Q569Z5 1032 aaKnown RBP19.16■□□□□ 0.66
Ckap4-201ENSMUST00000053871 E4f1Q8CCE9 783 aa19.16■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Mst1rQ62190 1378 aa19.15■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Fam84aQ9D650 292 aa19.15■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Sgsm2Q80U12 1005 aa19.14■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Simc1E9Q6E9 1354 aa19.14■□□□□ 0.66
Ckap4-201ENSMUST00000053871 Fkbp5Q64378 456 aa19.14■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Cchcr1Q8K2I2 770 aa19.14■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Sh3bp5Q9Z131 463 aa19.14■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Nid2O88322 1403 aa19.14■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Pde3bQ61409 1100 aa19.14■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Rrp9Q91WM3 475 aaKnown RBP19.14■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Nphp3Q7TNH6 1325 aa19.13■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Cnnm3Q32NY4 713 aa19.13■□□□□ 0.65
Ckap4-201ENSMUST00000053871 DbnlQ62418 436 aa19.13■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Ccdc178Q8CDV0 866 aa19.13■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Efcab2Q9CQ46 164 aa19.13■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Utp3Q9JI13 469 aaKnown RBP19.13■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Kcna6Q61923 529 aa19.13■□□□□ 0.65
Ckap4-201ENSMUST00000053871 Polr3gQ6NXY9 223 aa19.13■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms