RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Myo5cE9Q1F5 1742 aa17.81■□□□□ 0.44
Usp4-201ENSMUST00000035237 Hoxb7P09024 217 aa17.81■□□□□ 0.44
Usp4-201ENSMUST00000035237 Tpm1P58771 284 aa17.81■□□□□ 0.44
Usp4-201ENSMUST00000035237 Ubash3aQ3V3E1 624 aa17.81■□□□□ 0.44
Usp4-201ENSMUST00000035237 Kank4Q6P9J5 1016 aa17.81■□□□□ 0.44
Usp4-201ENSMUST00000035237 Ak2Q9WTP6 239 aa17.81■□□□□ 0.44
Usp4-201ENSMUST00000035237 Abca8bQ8K440 1620 aa17.81■□□□□ 0.44
Usp4-201ENSMUST00000035237 Cep170bQ80U49 1574 aa17.8■□□□□ 0.44
Usp4-201ENSMUST00000035237 Irgm2A0A140LIF8 407 aa17.8■□□□□ 0.44
Usp4-201ENSMUST00000035237 Pkp1P97350 728 aaKnown RBP17.8■□□□□ 0.44
Usp4-201ENSMUST00000035237 Calcoco2A2A6M5 331 aa17.8■□□□□ 0.44
Usp4-201ENSMUST00000035237 DpydQ8CHR6 1025 aa17.8■□□□□ 0.44
Usp4-201ENSMUST00000035237 BccipQ9CWI3 316 aa17.79■□□□□ 0.44
Usp4-201ENSMUST00000035237 Add3Q9QYB5 706 aaKnown RBP17.79■□□□□ 0.44
Usp4-201ENSMUST00000035237 Tmem132eQ6IEE6 982 aa17.79■□□□□ 0.44
Usp4-201ENSMUST00000035237 Serpinb6bO08804 377 aa17.79■□□□□ 0.44
Usp4-201ENSMUST00000035237 Q8C5K5 320 aa17.79■□□□□ 0.44
Usp4-201ENSMUST00000035237 DnmbpQ6TXD4 1580 aa17.79■□□□□ 0.44
Usp4-201ENSMUST00000035237 Ms4a2P20490 235 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Leo1Q5XJE5 667 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Ano1Q8BHY3 960 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Gtf3c5Q8R2T8 520 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Mdm2P23804 489 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Cct2P80314 535 aaKnown RBP17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Atf7Q8R0S1 413 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Disp3A3KFU9 1347 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Stk36Q69ZM6 1316 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Bin1O08539 588 aaKnown RBP17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Anp32eP97822 260 aaKnown RBP17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Rab3gap1Q80UJ7 981 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 4930548H24RikQ9D496 437 aa17.78■□□□□ 0.44
Usp4-201ENSMUST00000035237 Plcd3Q8K2J0 785 aa17.77■□□□□ 0.44
Usp4-201ENSMUST00000035237 Mrpl50Q8VDT9 159 aaKnown RBP17.77■□□□□ 0.44
Usp4-201ENSMUST00000035237 Tmem132aQ922P8 1018 aa17.77■□□□□ 0.44
Usp4-201ENSMUST00000035237 Bag3Q9JLV1 577 aaKnown RBP17.77■□□□□ 0.44
Usp4-201ENSMUST00000035237 Prex1Q69ZK0 1650 aa17.77■□□□□ 0.43
Usp4-201ENSMUST00000035237 Arid5bQ8BM75 1188 aaKnown RBP17.77■□□□□ 0.43
Usp4-201ENSMUST00000035237 Srgap1Q91Z69 1062 aa17.77■□□□□ 0.43
Usp4-201ENSMUST00000035237 Arhgap23Q69ZH9 1483 aa17.77■□□□□ 0.43
Usp4-201ENSMUST00000035237 Gsdma3Q5Y4Y6 464 aa17.76■□□□□ 0.43
Usp4-201ENSMUST00000035237 Me3Q8BMF3 604 aa17.76■□□□□ 0.43
Usp4-201ENSMUST00000035237 Inpp5bQ8K337 993 aa17.76■□□□□ 0.43
Usp4-201ENSMUST00000035237 Dnajc14Q921R4 703 aa17.76■□□□□ 0.43
Usp4-201ENSMUST00000035237 PnnO35691 725 aaKnown RBP17.76■□□□□ 0.43
Usp4-201ENSMUST00000035237 PhaxQ9JJT9 385 aaKnown RBP17.76■□□□□ 0.43
Usp4-201ENSMUST00000035237 Q3UJC8 639 aa17.75■□□□□ 0.43
Usp4-201ENSMUST00000035237 Map3k2Q61083 619 aa17.75■□□□□ 0.43
Usp4-201ENSMUST00000035237 L1td1Q587J6 782 aaKnown RBP17.75■□□□□ 0.43
Usp4-201ENSMUST00000035237 Mns1Q61884 491 aa17.75■□□□□ 0.43
Usp4-201ENSMUST00000035237 Fsd1Q7TPM6 496 aa17.75■□□□□ 0.43
Usp4-201ENSMUST00000035237 Atp10aO54827 1508 aa17.75■□□□□ 0.43
Usp4-201ENSMUST00000035237 Btbd11Q6GQW0 1109 aa17.75■□□□□ 0.43
Usp4-201ENSMUST00000035237 Abca8aQ8K442 1620 aa17.75■□□□□ 0.43
Usp4-201ENSMUST00000035237 Ifit1Q64282 463 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Ano10Q8BH79 659 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Nlrp3Q8R4B8 1033 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Lnx1O70263 728 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Stat1P42225 749 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Ccdc102aQ3TMW1 549 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Ddx27Q921N6 760 aaKnown RBP17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Ifi35Q9D8C4 286 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Rsph4aQ8BYM7 716 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Plcd1Q8R3B1 756 aa17.74■□□□□ 0.43
Usp4-201ENSMUST00000035237 Zscan29E9Q5B4 869 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Stk38Q91VJ4 465 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 FanccP50652 591 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Paxbp1P58501 919 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Trim25Q61510 634 aaKnown RBP17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Zbtb3Q91X45 518 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Hecw2Q6I6G8 1578 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Mybbp1aQ7TPV4 1344 aaKnown RBP17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Stx1aO35526 288 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Spag5Q7TME2 1165 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Sgsm2Q80U12 1005 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Tmx1Q8VBT0 278 aa17.73■□□□□ 0.43
Usp4-201ENSMUST00000035237 Hoxa7P02830 229 aa17.72■□□□□ 0.43
Usp4-201ENSMUST00000035237 Zkscan4Q5SZT6 480 aa17.72■□□□□ 0.43
Usp4-201ENSMUST00000035237 Snw1Q9CSN1 536 aaKnown RBP17.72■□□□□ 0.43
Usp4-201ENSMUST00000035237 Mrvi1Q9WUX5 899 aaKnown RBP17.72■□□□□ 0.43
Usp4-201ENSMUST00000035237 Nckap5lQ6GQX2 1323 aa17.72■□□□□ 0.43
Usp4-201ENSMUST00000035237 Synj2Q9D2G5 1434 aa17.72■□□□□ 0.43
Usp4-201ENSMUST00000035237 Dnaaf4Q8R368 420 aa17.72■□□□□ 0.43
Usp4-201ENSMUST00000035237 Abca17E9PX95 1733 aa17.72■□□□□ 0.43
Usp4-201ENSMUST00000035237 Ercc3P49135 783 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Atp1a3Q6PIC6 1013 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Zkscan5Q9Z1D8 819 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Ets1P27577 440 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Rec8Q8C5S7 591 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 TatQ8QZR1 454 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Vps18Q8R307 973 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Cfap99A0A140LIX9 648 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Tgfb1i1Q62219 461 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 TrhQ62361 256 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Elf2Q9JHC9 593 aa17.71■□□□□ 0.43
Usp4-201ENSMUST00000035237 Ugt1a5B2RT14 529 aa17.7■□□□□ 0.42
Usp4-201ENSMUST00000035237 PsapQ61207 557 aaKnown RBP17.7■□□□□ 0.42
Usp4-201ENSMUST00000035237 Zfp113Q8C689 439 aa17.7■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ttc27Q8CD92 847 aa17.7■□□□□ 0.42
Usp4-201ENSMUST00000035237 Amotl2Q8K371 772 aa17.7■□□□□ 0.42
Usp4-201ENSMUST00000035237 Echdc1Q9D9V3 322 aa17.7■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 130.7 ms