RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Tmc2Q8R4P4 888 aa14.8□□□□□ -0.04
Msh6-201ENSMUST00000005503 Skint5A7XUY5 1461 aa14.8□□□□□ -0.04
Msh6-201ENSMUST00000005503 Pbrm1Q8BSQ9 1634 aaKnown RBP14.8□□□□□ -0.04
Msh6-201ENSMUST00000005503 A0A1L1SQF0 893 aa14.8□□□□□ -0.04
Msh6-201ENSMUST00000005503 Nphp3Q7TNH6 1325 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Gm21698A0A087WQP8 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Gm21671G3UY31 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Ddx27Q921N6 760 aaKnown RBP14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Lmbr1lQ9D1E5 489 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Prrc2bQ7TPM1 1486 aaKnown RBP14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Zfp51Q3U4L8 781 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Wdr93Q402B2 695 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Gm21663A0A0G2JE01 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Gm7361D3Z6R1 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 5031410I06RikE9Q4E0 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Gm1979E9QAN3 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Gm5862K7N5V5 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Gm10220K7N660 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Dusp9Q7TNL7 452 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 CenpqQ9CPQ5 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Speer4bQ9D9F7 267 aa14.79□□□□□ -0.04
Msh6-201ENSMUST00000005503 Rbbp8nlA2ABX0 614 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Hoxb7P09024 217 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Znf771Q8BJ90 317 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Zscan29E9Q5B4 869 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Ubash3aQ3V3E1 624 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Ankib1Q6ZPS6 1085 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Ano10Q8BH79 659 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Ripk4Q9ERK0 786 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Oas2E9Q9A9 742 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Frat1P70339 274 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Secisbp2lQ6A098 1086 aaKnown RBP14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Tpm4Q6IRU2 248 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 OptnQ8K3K8 584 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Znf653Q6YND2 615 aa14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Smc2Q8CG48 1191 aaKnown RBP14.78□□□□□ -0.04
Msh6-201ENSMUST00000005503 Lekr1B2RVN1 116 aa14.77□□□□□ -0.04
Msh6-201ENSMUST00000005503 Irf5P56477 497 aa14.77□□□□□ -0.04
Msh6-201ENSMUST00000005503 LyarQ08288 388 aaKnown RBP14.77□□□□□ -0.04
Msh6-201ENSMUST00000005503 Cfap74Q3UY96 1578 aa14.77□□□□□ -0.04
Msh6-201ENSMUST00000005503 Fam208aQ69ZR9 1610 aaKnown RBP14.77□□□□□ -0.04
Msh6-201ENSMUST00000005503 Jakmip2D3YXK0 820 aa14.77□□□□□ -0.05
Msh6-201ENSMUST00000005503 Ddx58Q6Q899 926 aa14.77□□□□□ -0.05
Msh6-201ENSMUST00000005503 Mrpl44Q9CY73 333 aaKnown RBP14.77□□□□□ -0.05
Msh6-201ENSMUST00000005503 Mrps25Q9D125 171 aaKnown RBP14.77□□□□□ -0.05
Msh6-201ENSMUST00000005503 Ccdc112A0AUP1 442 aa14.77□□□□□ -0.05
Msh6-201ENSMUST00000005503 Vwa3bJ9JI28 736 aa14.77□□□□□ -0.05
Msh6-201ENSMUST00000005503 Cep55Q8BT07 462 aa14.77□□□□□ -0.05
Msh6-201ENSMUST00000005503 TkfcQ8VC30 578 aa14.77□□□□□ -0.05
Msh6-201ENSMUST00000005503 Mcm6P97311 821 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Fnbp4Q6ZQ03 1031 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Nat10Q8K224 1024 aaKnown RBP14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Trim28Q62318 834 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Maats1Q8BRC6 783 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Gimap6Q8K349 305 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Cdca7lQ922M5 438 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Irx4Q9QY61 515 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Rad50P70388 1312 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 TbcaP48428 108 aaKnown RBP14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Rufy3Q9D394 469 aa14.76□□□□□ -0.05
Msh6-201ENSMUST00000005503 Gsdma2Q32M21 443 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Mum1Q6DID5 682 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Naip7Q9JIB3 1402 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Mybbp1aQ7TPV4 1344 aaKnown RBP14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Gm21680A0A0G2JGR8 267 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Trim30cD3YVI9 513 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Smg7Q5RJH6 1138 aaKnown RBP14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Zscan22Q8BGS5 496 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Ncbp3Q8BZR9 615 aaKnown RBP14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Mtmr3Q8K296 1196 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Trim29Q8R2Q0 587 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 MicalclQ9D5U9 680 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Cfap65Q3V0B4 1847 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Grm8P47743 908 aa14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Bicc1Q99MQ1 977 aaKnown RBP14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Cwc15Q9JHS9 229 aaKnown RBP14.75□□□□□ -0.05
Msh6-201ENSMUST00000005503 Kif24Q6NWW5 1356 aa14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Chl1P70232 1209 aa14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Zkscan4Q5SZT6 480 aa14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Wdr24Q8CFJ9 790 aa14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Ccdc162pQ0VG85 912 aa14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Larp1Q6ZQ58 1072 aaKnown RBP14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Cep120Q7TSG1 988 aa14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Frmpd2A0A140LI67 1392 aa14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Kiaa0753Q6A000 959 aa14.74□□□□□ -0.05
Msh6-201ENSMUST00000005503 Gng11P61953 73 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Cep112Q5PR68 954 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Fam170aQ66LM6 333 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 U2af1l4Q8BGJ9 220 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Erbb4Q61527 1308 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Uhrf1bp1lA2RSJ4 1457 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Dnai2A2AC93 623 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Zfp397Q7TNK4 527 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Rbm42Q91V81 474 aaKnown RBP14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Iqca1Q9CUL5 857 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 LratQ9JI60 231 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Tnni2P13412 182 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Mtx1P47802 317 aa14.73□□□□□ -0.05
Msh6-201ENSMUST00000005503 Atp1a3Q6PIC6 1013 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Rufy1Q8BIJ7 712 aa14.72□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms