RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 ATF6P18850 670 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 PCMT1P22061 227 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 PRKACBP22694 351 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 SPINT3P49223 89 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 TSPAN5P62079 268 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 MAP4K2Q12851 820 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 FAM46CQ5VWP2 391 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 NEIL2Q969S2 332 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 SCRN2Q96FV2 425 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 CAMK1GQ96NX5 476 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 PRAP1Q96NZ9 151 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 NUDT15Q9NV35 164 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 NINQ8N4C6 2090 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 CCL16O15467 120 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 SSX4O60224 188 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 MMP20O60882 483 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GPR37L1O60883 481 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 HMGN1P05114 100 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GALTP07902 379 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 CD70P32970 193 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GMFBP60983 142 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 KCNC3Q14003 757 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 ZMAT1Q5H9K5 638 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 OTOP2Q7RTS6 562 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 UBQLNLQ8IYU4 475 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 SIMC1Q8NDZ2 872 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 OR4C6Q8NH72 309 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 SLC7A6Q92536 515 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 C17orf62Q9BQA9 187 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 PDCD10Q9BUL8 212 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 SIRT5Q9NXA8 310 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 AKAP7Q9P0M2 348 aaPredicted RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 RGS17Q9UGC6 210 aaPredicted RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 A3GALT2U3KPV4 340 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 TRBV4-1A0A0J9YWV2 114 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 M0R233 179 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GPX5O75715 221 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 KLHL18O94889 574 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 PRSS23O95084 383 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 DRD5P21918 477 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 VIPR1P32241 457 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 PRKCZQ05513 592 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GPR68Q15743 365 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 PRPF38BQ5VTL8 546 aaKnown RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 GJD3Q8N144 294 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 DNAJC5GQ8N7S2 189 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 OR9A1PQ8NGU1 263 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 C1orf216Q8TAB5 229 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 WDR48Q8TAF3 677 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 ASB11Q8WXH4 323 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GON7Q9BXV9 100 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 TRIM36Q9NQ86 728 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 MRPL15Q9P015 296 aaKnown RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 TMEM98Q9Y2Y6 226 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 SLC9A3R1O14745 358 aaPredicted RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 SLC16A5O15375 505 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 ERI3O43414 337 aaKnown RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 ICMTO60725 284 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 TLX1P31314 330 aaPredicted RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 PSMD4P55036 377 aaKnown RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 ST3GAL3Q11203 375 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 SGCGQ13326 291 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GAB1Q13480 694 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 SLC9A5Q14940 896 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 NXNL2Q5VZ03 156 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GRHL2Q6ISB3 625 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 BRAT1Q6PJG6 821 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 FRRS1Q6ZNA5 592 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 VRK3Q8IV63 474 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 CACNG6Q9BXT2 260 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 P2RY12Q9H244 342 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GPN1Q9HCN4 374 aaPredicted RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
USB1-212ENST00000566082 ADAP2Q9NPF8 381 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 CNIH4Q9P003 139 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 LHX3Q9UBR4 397 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 RWDD3Q9Y3V2 267 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 GPSM3Q9Y4H4 160 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 ALG5Q9Y673 324 aa10.03□□□□□ -0.8
USB1-212ENST00000566082 TRBV23OR9-2A0A075B6M9 112 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 L7N2F9 121 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 INPPL1O15357 1258 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 FRS3O43559 492 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 NCR1O76036 304 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 IFNGP01579 166 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 EPHX1P07099 455 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 KELP23276 732 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 ACVR1BP36896 505 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 OMPP47874 163 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 TMEM44Q2T9K0 475 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 CCDC58Q4VC31 144 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 SLC30A6Q6NXT4 461 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 B3GLCTQ6Y288 498 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 ZNF852Q6ZMS4 543 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 YAF2Q8IY57 180 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms