RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Nacc2Q9DCM7 586 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fgf21Q9JJN1 210 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Srd5a3Q9WUP4 330 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 HnrnpfQ9Z2X1 415 aaKnown RBP14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 1700028J19RikA0A0U1RP08 172 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Olfr1006A2ALD2 312 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Syndig1A2ANU3 258 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 4930595M18RikA2RRY9 829 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cdh5P55284 784 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 C1qaP98086 245 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Glycam1Q02596 151 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gdf3Q07104 366 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gdf9Q07105 441 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 HltfQ6PCN7 1003 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Eml2Q7TNG5 649 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Olfr1307Q7TQX1 312 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tex13c3Q810P0 219 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Creg2Q8BGC9 288 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Derl2Q8BNI4 239 aaKnown RBP14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Zfp101Q8BP18 612 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Piwil2Q8CDG1 971 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ugt2b34Q8K154 532 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Clec14aQ8VCP9 459 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Akr1c21Q91WR5 323 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Znf639Q99KZ6 485 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cby3Q9CVN6 235 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Hnrnpa0Q9CX86 305 aaKnown RBP14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Eral1Q9CZU4 437 aaKnown RBP14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 1700069L16RikQ9D9H5 109 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ifi30Q9ESY9 248 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Arpc3Q9JM76 178 aaKnown RBP14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Sema4gQ9WUH7 837 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 9930021J03RikH3BKP8 2027 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Prr36E9PV26 1098 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Herc6F2Z461 1003 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Wnt1P04426 370 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mc3rP33033 323 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pdcd5P56812 126 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Txnl4aP83877 142 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 CrtamQ149L7 389 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Slc47a2Q3V050 573 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cldn34b4Q3V0X2 211 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Glt8d2Q640P4 349 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gramd2bQ6PEM6 445 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pcdh8Q7TSK3 1070 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Dcaf12l2Q8BGW4 469 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pithd1Q8BWR2 211 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mcoln3Q8R4F0 553 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 HpgdQ8VCC1 269 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Med27Q9DB40 311 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Nr4a3Q9QZB6 627 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Psma4Q9R1P0 261 aa14.03□□□□□ -0.16
Nup88-202ENSMUST00000108530 Zscan4eA0A1B0GRE8 505 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 A0A286YDP4 300 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Zfp738B8JJX8 793 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Inpp5aE9QAS7 422 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 DdcO88533 480 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Igkv7-33P01632 114 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pmp22P16646 161 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Drd2P61168 444 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Smad4P97471 551 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Atp5a1Q03265 553 aaKnown RBP14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Hif3aQ0VBL6 662 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pin1rt1Q3ULQ2 159 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Trim40Q3UWA4 246 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 OclnQ61146 521 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tfap2cQ61312 449 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Otud6aQ6IE21 290 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Eif2s1Q6ZWX6 315 aaKnown RBP14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cept1Q8BGS7 416 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Grsf1Q8C5Q4 479 aaKnown RBP14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Serpina11Q8CIE0 424 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Vmn1r81Q8R286 306 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Vmn1r6Q8R2D4 303 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Olfr347Q8VGK2 312 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Asb17Q8VHP9 295 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fam118aQ91YN1 357 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Otud1Q9CUB6 454 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mgme1Q9CXC3 338 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Sp2Q9D2H6 612 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 PacrglQ9D3X5 248 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Capns2Q9D7J7 247 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Rsph9Q9D9V4 276 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Prl8a1Q9DAV8 240 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Dock4P59764 1978 aa14.02□□□□□ -0.16
Nup88-202ENSMUST00000108530 Kbtbd6E9PYD7 486 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr549E9Q542 316 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Kbtbd7G5E8C2 690 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Vmn1r20K7N778 303 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Map2k3O09110 347 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Slc6a6O35316 621 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Bmp6P20722 510 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 BrafP28028 804 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Htr1bP28334 386 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Foxred1Q3TQB2 487 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Syce1lQ5D525 247 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Phf12Q5SPL2 1003 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Fgl1Q71KU9 314 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Plekha6Q7TQG1 1173 aa14.02□□□□□ -0.17
Nup88-202ENSMUST00000108530 Slc25a12Q8BH59 677 aa14.02□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 123.6 ms