Protein–RNA interactions for Protein: Q8R2D4

Vmn1r6, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r6Q8R2D4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Vmn1r6Q8R2D4 Gm25239-201ENSMUST00000174915 86 ntBASIC31.91■■■□□ 2.7
Vmn1r6Q8R2D4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Vmn1r6Q8R2D4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
Vmn1r6Q8R2D4 Psd-208ENSMUST00000224556 2034 ntBASIC30.16■■■□□ 2.42
Vmn1r6Q8R2D4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Vmn1r6Q8R2D4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Vmn1r6Q8R2D4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Vmn1r6Q8R2D4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Vmn1r6Q8R2D4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Vmn1r6Q8R2D4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Vmn1r6Q8R2D4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Vmn1r6Q8R2D4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Vmn1r6Q8R2D4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Vmn1r6Q8R2D4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Vmn1r6Q8R2D4 Gm15042-201ENSMUST00000120212 883 ntBASIC28.69■■■□□ 2.18
Vmn1r6Q8R2D4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.58■■■□□ 2.17
Vmn1r6Q8R2D4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Vmn1r6Q8R2D4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Vmn1r6Q8R2D4 Gm15045-201ENSMUST00000117359 883 ntBASIC28.25■■■□□ 2.11
Vmn1r6Q8R2D4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Vmn1r6Q8R2D4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Vmn1r6Q8R2D4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Vmn1r6Q8R2D4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Vmn1r6Q8R2D4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Vmn1r6Q8R2D4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Vmn1r6Q8R2D4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Vmn1r6Q8R2D4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Vmn1r6Q8R2D4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
Vmn1r6Q8R2D4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Vmn1r6Q8R2D4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.66■■■□□ 2.02
Vmn1r6Q8R2D4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Vmn1r6Q8R2D4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.53■■■□□ 2
Vmn1r6Q8R2D4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Vmn1r6Q8R2D4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.49■■□□□ 1.99
Vmn1r6Q8R2D4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Vmn1r6Q8R2D4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Vmn1r6Q8R2D4 Gm24109-201ENSMUST00000175489 103 ntBASIC27.31■■□□□ 1.96
Vmn1r6Q8R2D4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Vmn1r6Q8R2D4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.18■■□□□ 1.94
Vmn1r6Q8R2D4 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.17■■□□□ 1.94
Vmn1r6Q8R2D4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Vmn1r6Q8R2D4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Vmn1r6Q8R2D4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Vmn1r6Q8R2D4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.99■■□□□ 1.91
Vmn1r6Q8R2D4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Vmn1r6Q8R2D4 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.86■■□□□ 1.89
Vmn1r6Q8R2D4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Vmn1r6Q8R2D4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Vmn1r6Q8R2D4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Vmn1r6Q8R2D4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Vmn1r6Q8R2D4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Vmn1r6Q8R2D4 Gm23366-201ENSMUST00000175022 89 ntBASIC26.71■■□□□ 1.87
Vmn1r6Q8R2D4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Vmn1r6Q8R2D4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Vmn1r6Q8R2D4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Vmn1r6Q8R2D4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vmn1r6Q8R2D4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Vmn1r6Q8R2D4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Vmn1r6Q8R2D4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Vmn1r6Q8R2D4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Vmn1r6Q8R2D4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Vmn1r6Q8R2D4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Vmn1r6Q8R2D4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Vmn1r6Q8R2D4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.42■■□□□ 1.82
Vmn1r6Q8R2D4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Vmn1r6Q8R2D4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.39■■□□□ 1.82
Vmn1r6Q8R2D4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Vmn1r6Q8R2D4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vmn1r6Q8R2D4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vmn1r6Q8R2D4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Vmn1r6Q8R2D4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vmn1r6Q8R2D4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vmn1r6Q8R2D4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Vmn1r6Q8R2D4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Vmn1r6Q8R2D4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Vmn1r6Q8R2D4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Vmn1r6Q8R2D4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Vmn1r6Q8R2D4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Vmn1r6Q8R2D4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Vmn1r6Q8R2D4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.74
Vmn1r6Q8R2D4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Vmn1r6Q8R2D4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Vmn1r6Q8R2D4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Vmn1r6Q8R2D4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Vmn1r6Q8R2D4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Vmn1r6Q8R2D4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Vmn1r6Q8R2D4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Vmn1r6Q8R2D4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Vmn1r6Q8R2D4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Vmn1r6Q8R2D4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Vmn1r6Q8R2D4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.55■■□□□ 1.68
Vmn1r6Q8R2D4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Vmn1r6Q8R2D4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Vmn1r6Q8R2D4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Vmn1r6Q8R2D4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Vmn1r6Q8R2D4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.47■■□□□ 1.67
Vmn1r6Q8R2D4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Vmn1r6Q8R2D4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Vmn1r6Q8R2D4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms