RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DKKL1Q9UK85 242 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 ATRNL1Q5VV63 1379 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 EDDM13A0A1B0GTR0 161 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 A0A1W2PPL8 197 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 AGAP5A6NIR3 686 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CLDN7O95471 211 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 GTF2F2P13984 249 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CCNOP22674 350 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CHMP24386 653 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 GNMTQ14749 295 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 ZSWIM9Q86XI8 627 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 OR5M3Q8NGP4 307 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 DENND1AQ8TEH3 1009 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CLEC4DQ8WXI8 215 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 NEDD4LQ96PU5 975 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 NTN4Q9HB63 628 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CACNG4Q9UBN1 327 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 H7C417 338 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 B4GALT2O60909 372 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 ELK4P28324 431 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 ARSJQ5FYB0 599 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-208ENST00000538570 PDZD9Q8IXQ8 264 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 UBQLNLQ8IYU4 475 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 OR4Q3Q8NH05 313 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 KIAA1191Q96A73 305 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 MYNNQ9NPC7 610 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 MKS1Q9NXB0 559 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TEX264Q9Y6I9 313 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CPED1A4D0V7 1026 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 UPK3BL1B0FP48 263 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 UPK3BL2E5RIL1 263 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 SERPINF1P36955 418 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 KCNC3Q14003 757 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CYP27C1Q4G0S4 372 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 RABL3Q5HYI8 236 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 VTCN1Q7Z7D3 282 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 SAMD12Q8N8I0 201 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 OR9I1Q8NGQ6 314 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 NPLOC4Q8TAT6 608 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 HMGB4Q8WW32 186 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TFGQ92734 400 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-208ENST00000538570 C16orf58Q96GQ5 468 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 REEP4Q9H6H4 257 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 LDAHQ9H6V9 325 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 BRF2Q9HAW0 419 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 LCHNA4D1U4 455 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 SOWAHBA6NEL2 793 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 ANKRD66B4E2M5 251 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TOXO94900 526 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 SFTPBP07988 381 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 UQCRC2P22695 453 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 MAP2K3P46734 347 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 SLC35F1Q5T1Q4 408 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF584Q8IVC4 421 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 NTPCRQ9BSD7 190 aaKnown RBP9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM185BQ9H7F4 350 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 NANSQ9NR45 359 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 PPP4R1LQ9P1A2 415 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 WDR45Q9Y484 360 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 GDF5P43026 501 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 NR4A2P43354 598 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 CTBP2P56545 445 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 GPX6P59796 221 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 DNAJB13P59910 316 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 PCLAFQ15004 111 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 PTCHD3Q3KNS1 767 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 LRRC37A5PQ49AS3 106 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 C2orf27AQ580R0 203 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF678Q5SXM1 525 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 PHF19Q5T6S3 580 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 BAIAP2L2Q6UXY1 529 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 CPNE8Q86YQ8 564 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 OR6N2Q8NGY6 317 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ELP5Q8TE02 316 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 WDR77Q9BQA1 342 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 POLDIP3Q9BY77 421 aaKnown RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 OR51B5Q9H339 312 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ASB6Q9NWX5 421 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 C19orf25Q9UFG5 118 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 HS3ST4Q9Y661 456 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 H0YAE9 185 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 RBBP9O75884 186 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 IL33O95760 270 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 HOXD8P13378 290 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 S1PR1P21453 382 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 EDNRBP24530 442 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 GSTM2P28161 218 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ACVRL1P37023 503 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ARSFP54793 590 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ST3GAL4Q11206 333 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 INAVAQ3KP66 663 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 NOXRED1Q6NXP6 359 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 AGTRAPQ6RW13 159 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 OR4E2Q8NGC2 313 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF597Q96LX8 424 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 C11orf84Q9BUA3 381 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 PAK1IP1Q9NWT1 392 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 AJAP1Q9UKB5 411 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ERVK-19Q9WJR5 959 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 SOX1O00570 391 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms