RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 LRRTM4Q86VH4 590 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 ZNF347Q96SE7 839 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 ZNF559Q9BR84 538 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 GBA3Q9H227 469 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 OR51I1Q9H343 314 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 CD8B2A6NJW9 211 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 DUXAA6NLW8 204 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 OR2J3O76001 311 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 CD8BP10966 210 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 CSNK2A2P19784 350 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 THBS2P35442 1172 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 NSG1P42857 185 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 HSD11B2P80365 405 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 CDKAL1Q5VV42 579 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 CATSPERGQ6ZRH7 1159 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 TAAR8Q969N4 342 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 CPXM1Q96SM3 734 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 DNM1LO00429 736 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 PEX10O60683 326 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 EPHA4P54764 986 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 PON3Q15166 354 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 SMUG1Q53HV7 270 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 C6orf132Q5T0Z8 1188 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 ZNF705AQ6ZN79 300 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 TIMMDC1Q9NPL8 285 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 PCDHGA11Q9Y5H2 935 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 ADCY10Q96PN6 1610 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 C2P06681 752 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 G0S2P27469 103 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 HERVK_113P63132 956 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 TEX44Q53QW1 395 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 WDR45BQ5MNZ6 344 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 C6orf141Q5SZD1 244 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 KIAA0895LQ68EN5 471 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 HEPHL1Q6MZM0 1159 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 OR14L1PQ8NHC6 308 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 TLR4O00206 839 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 PAX3P23760 479 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 SHMT1P34896 483 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 GABRA3P34903 492 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 LASP1Q14847 261 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 LMF1Q96S06 567 aa15.3■□□□□ 0.04
CACNA1A-202ENST00000573710 SCN1AP35498 2009 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 C12orf71A8MTZ7 269 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 ACOT7O00154 380 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 IFNA17P01571 189 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 XRCC1P18887 633 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 CAV2P51636 162 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 EEFSECP57772 596 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 DLX2Q07687 328 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 SF3A2Q15428 464 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 TMEM71Q6P5X7 295 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 NCEH1Q6PIU2 408 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 NPAS4Q8IUM7 802 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 PCED1BQ96HM7 432 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 PLA2G12BQ9BX93 195 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 CDH22Q9UJ99 828 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 DHDHQ9UQ10 334 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 TBX18O95935 607 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 LPLP06858 475 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 HMGCS1Q01581 520 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 ROR2Q01974 943 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 RAB30Q15771 203 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 Q6ZVU0 165 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 TMIEQ8NEW7 156 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 C11orf49Q9H6J7 331 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 PCDHAC2Q9Y5I4 1007 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 WNT6Q9Y6F9 365 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 DCDC2BA2VCK2 349 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 RAB31Q13636 194 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 TUBA3CQ13748 450 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 PLAC9Q5JTB6 97 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 LRRC38Q5VT99 294 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 MBOAT1Q6ZNC8 495 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 COQ10BQ9H8M1 238 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 ALKQ9UM73 1620 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 SERTM2A0A1B0GWG4 89 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 FAM170BA6NMN3 283 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 KLF10Q13118 480 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 FBXW12Q6X9E4 464 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 CREB3L2Q70SY1 520 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 PDSS2Q86YH6 399 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 TMEM185AQ8NFB2 350 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 ASB15Q8WXK1 588 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 S100A14Q9HCY8 104 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 ERVK13-1Q9NX77 482 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 ITPRIPL2Q3MIP1 535 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 LRIT3Q3SXY7 679 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 RALGPS1Q5JS13 557 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 SYT4Q9H2B2 425 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 LHX5Q9H2C1 402 aa15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 SRA1Q9HD15 236 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-202ENST00000573710 PRORSD1PA6NEY8 169 aa15.28■□□□□ 0.04
CACNA1A-202ENST00000573710 P04436 131 aa15.28■□□□□ 0.04
CACNA1A-202ENST00000573710 CD9P21926 228 aa15.28■□□□□ 0.04
CACNA1A-202ENST00000573710 SFTPDP35247 375 aa15.28■□□□□ 0.04
CACNA1A-202ENST00000573710 ACVR1BP36896 505 aa15.28■□□□□ 0.04
CACNA1A-202ENST00000573710 RPS14P62263 151 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-202ENST00000573710 LRIF1Q5T3J3 769 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms