RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Ssc4dA1L0T3 586 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Arl9F7BE40 171 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Hnrnpa2b1O88569 353 aaKnown RBP14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Rab23P35288 237 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Actr1aP61164 376 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Tmem248Q3TBN1 314 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ubfd1Q78JW9 368 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Avl9Q80U56 649 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Poglut1Q8BYB9 392 aaKnown RBP14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Nfatc4Q8K120 901 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ppp1r8Q8R3G1 351 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Actr1bQ8R5C5 376 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Vmn1r69Q8VIC1 319 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 OptcQ920A0 328 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Khdc3Q9CWU5 440 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Serpinb1aQ9D154 379 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Pop7Q9DCH2 140 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Igkv6-20A0A140T8P2 115 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Fam83cA2ARK0 776 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Zfp992B1ASD8 573 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gm5475D3YV11 175 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gm340F6RGI3 1242 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 EllO08856 602 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 NapsaO09043 419 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 AurkcO88445 282 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Sod2P09671 222 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 AnpepP97449 966 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Eif1adQ3THJ3 170 aaKnown RBP14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 GnptgQ6S5C2 307 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 HhipQ7TN16 700 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Amigo1Q80ZD8 492 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Bbs4Q8C1Z7 520 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Shisa7Q8C3Q5 558 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Fbxl8Q8CIG9 374 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Bdh2Q8JZV9 245 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Zfp991Q8R1N3 573 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Cdt1Q8R4E9 557 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 HnrnprQ8VHM5 632 aaKnown RBP14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Chid1Q922Q9 393 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Hspa14Q99M31 509 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Efcab1Q9D3N2 212 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Aif1lQ9EQX4 150 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Nrip2Q9JHR9 270 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 1810010D01RikA0A1L1SR87 51 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gm6619F6URP1 175 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Zw10O54692 779 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 IghmP01872 454 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ccdc153P0C7Q1 202 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Tmem165P52875 323 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Kcnj13P86046 360 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 TepsinQ3U3N6 573 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Clca4bQ3UW98 925 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ostf1Q62422 215 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Sf1Q64213 653 aaKnown RBP14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Prmt8Q6PAK3 394 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Olfr798Q7TRH8 311 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Olfr792Q7TRH9 311 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Pcdh19Q80TF3 1145 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ugt2b35Q8BJL9 529 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Lats1Q8BYR2 1129 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Lin52Q8CD94 116 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Vps50Q8CI71 964 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Agpat4Q8K4X7 378 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 RabepkQ8VCH5 380 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Olfr986Q8VFN6 312 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Acsl6Q91WC3 697 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Mrps18bQ99N84 254 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 OoepQ9CWE6 164 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Bud23Q9CY21 281 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Borcs5Q9D920 195 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Fam96aQ9DCL2 160 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Sars2Q9JJL8 518 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ak4Q9WUR9 223 aaKnown RBP14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Sirpb1aA0A0A6YYP6 397 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gm6569D3YTM9 175 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Slc28a1E9PXX9 648 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 LcatP16301 438 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 PahP16331 453 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 ThpoP40226 356 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 PdxpP60487 292 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 KapP61110 121 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Hpcal1P62748 193 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Polr1bP70700 1135 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 SirpaP97797 513 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Nol9Q3TZX8 714 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Garem1Q3UFT3 876 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Osbp2Q5QNQ6 908 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Tas2r106Q7M724 308 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Wdr91Q7TMQ7 748 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ugt2a1Q80X89 528 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Prr5Q812A5 387 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Efr3aQ8BG67 819 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Pgs1Q8BHF7 553 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ccdc151Q8BSN3 593 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Polr1eQ8K202 482 aaKnown RBP14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Vmn1r38Q8R2E1 302 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Epsti1Q8VDI1 314 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Vps4aQ8VEJ9 437 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Olfr693Q8VF89 316 aa14.15□□□□□ -0.14
Nup88-202ENSMUST00000108530 Olfr352Q8VGJ9 315 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 80.9 ms