Protein–RNA interactions for Protein: Q8C3Q5

Shisa7, Protein shisa-7, mousemouse

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa7Q8C3Q5 Gm25239-201ENSMUST00000174915 86 ntBASIC37.02■■■■□ 3.52
Shisa7Q8C3Q5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
Shisa7Q8C3Q5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Shisa7Q8C3Q5 Gm15042-201ENSMUST00000120212 883 ntBASIC32.47■■■□□ 2.79
Shisa7Q8C3Q5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Shisa7Q8C3Q5 Gm24109-201ENSMUST00000175489 103 ntBASIC32.02■■■□□ 2.72
Shisa7Q8C3Q5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Shisa7Q8C3Q5 Gm15045-201ENSMUST00000117359 883 ntBASIC31.78■■■□□ 2.68
Shisa7Q8C3Q5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Shisa7Q8C3Q5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Shisa7Q8C3Q5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Shisa7Q8C3Q5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Shisa7Q8C3Q5 Gm23366-201ENSMUST00000175022 89 ntBASIC30.93■■■□□ 2.54
Shisa7Q8C3Q5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Shisa7Q8C3Q5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Shisa7Q8C3Q5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.3■■■□□ 2.44
Shisa7Q8C3Q5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shisa7Q8C3Q5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Shisa7Q8C3Q5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Shisa7Q8C3Q5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
Shisa7Q8C3Q5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Shisa7Q8C3Q5 Psd-208ENSMUST00000224556 2034 ntBASIC29.89■■■□□ 2.38
Shisa7Q8C3Q5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Shisa7Q8C3Q5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Shisa7Q8C3Q5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.82■■■□□ 2.36
Shisa7Q8C3Q5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
Shisa7Q8C3Q5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Shisa7Q8C3Q5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.66■■■□□ 2.34
Shisa7Q8C3Q5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.63■■■□□ 2.33
Shisa7Q8C3Q5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Shisa7Q8C3Q5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.47■■■□□ 2.31
Shisa7Q8C3Q5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shisa7Q8C3Q5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Shisa7Q8C3Q5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shisa7Q8C3Q5 Gm25238-201ENSMUST00000174914 89 ntBASIC29.19■■■□□ 2.26
Shisa7Q8C3Q5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.14■■■□□ 2.26
Shisa7Q8C3Q5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.13■■■□□ 2.25
Shisa7Q8C3Q5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Shisa7Q8C3Q5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Shisa7Q8C3Q5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Shisa7Q8C3Q5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Shisa7Q8C3Q5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Shisa7Q8C3Q5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Shisa7Q8C3Q5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
Shisa7Q8C3Q5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.59■■■□□ 2.17
Shisa7Q8C3Q5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shisa7Q8C3Q5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.55■■■□□ 2.16
Shisa7Q8C3Q5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shisa7Q8C3Q5 Gm27325-201ENSMUST00000175467 74 ntBASIC28.48■■■□□ 2.15
Shisa7Q8C3Q5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Shisa7Q8C3Q5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.38■■■□□ 2.13
Shisa7Q8C3Q5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Shisa7Q8C3Q5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.28■■■□□ 2.12
Shisa7Q8C3Q5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Shisa7Q8C3Q5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.19■■■□□ 2.1
Shisa7Q8C3Q5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Shisa7Q8C3Q5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.16■■■□□ 2.1
Shisa7Q8C3Q5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Shisa7Q8C3Q5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Shisa7Q8C3Q5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Shisa7Q8C3Q5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.98■■■□□ 2.07
Shisa7Q8C3Q5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Shisa7Q8C3Q5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Shisa7Q8C3Q5 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.9■■■□□ 2.06
Shisa7Q8C3Q5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Shisa7Q8C3Q5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Shisa7Q8C3Q5 Gm25262-201ENSMUST00000174934 133 ntBASIC27.88■■■□□ 2.05
Shisa7Q8C3Q5 Rab21-202ENSMUST00000218831 843 ntBASIC27.88■■■□□ 2.05
Shisa7Q8C3Q5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Shisa7Q8C3Q5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Shisa7Q8C3Q5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Shisa7Q8C3Q5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Shisa7Q8C3Q5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Shisa7Q8C3Q5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shisa7Q8C3Q5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.77■■■□□ 2.04
Shisa7Q8C3Q5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Shisa7Q8C3Q5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Shisa7Q8C3Q5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.7■■■□□ 2.03
Shisa7Q8C3Q5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Shisa7Q8C3Q5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Shisa7Q8C3Q5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.59■■■□□ 2.01
Shisa7Q8C3Q5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.57■■■□□ 2
Shisa7Q8C3Q5 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.54■■■□□ 2
Shisa7Q8C3Q5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Shisa7Q8C3Q5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.51■■□□□ 1.99
Shisa7Q8C3Q5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Shisa7Q8C3Q5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Shisa7Q8C3Q5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.4■■□□□ 1.98
Shisa7Q8C3Q5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.38■■□□□ 1.97
Shisa7Q8C3Q5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Shisa7Q8C3Q5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Shisa7Q8C3Q5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Shisa7Q8C3Q5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shisa7Q8C3Q5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.32■■□□□ 1.96
Shisa7Q8C3Q5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Shisa7Q8C3Q5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Shisa7Q8C3Q5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Shisa7Q8C3Q5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.16■■□□□ 1.94
Shisa7Q8C3Q5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.14■■□□□ 1.93
Shisa7Q8C3Q5 Gm26115-201ENSMUST00000175605 87 ntBASIC27.13■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms