Protein–RNA interactions for Protein: Q9D3N2

Efcab1, EF-hand calcium-binding domain-containing protein 1, mousemouse

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efcab1Q9D3N2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Efcab1Q9D3N2 Gm25239-201ENSMUST00000174915 86 ntBASIC31.74■■■□□ 2.67
Efcab1Q9D3N2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
Efcab1Q9D3N2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Efcab1Q9D3N2 Psd-208ENSMUST00000224556 2034 ntBASIC30.86■■■□□ 2.53
Efcab1Q9D3N2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Efcab1Q9D3N2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Efcab1Q9D3N2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Efcab1Q9D3N2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Efcab1Q9D3N2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Efcab1Q9D3N2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Efcab1Q9D3N2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Efcab1Q9D3N2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Efcab1Q9D3N2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29■■■□□ 2.23
Efcab1Q9D3N2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Efcab1Q9D3N2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Efcab1Q9D3N2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Efcab1Q9D3N2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Efcab1Q9D3N2 Gm15042-201ENSMUST00000120212 883 ntBASIC28.78■■■□□ 2.2
Efcab1Q9D3N2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Efcab1Q9D3N2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Efcab1Q9D3N2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Efcab1Q9D3N2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Efcab1Q9D3N2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Efcab1Q9D3N2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Efcab1Q9D3N2 Gm15045-201ENSMUST00000117359 883 ntBASIC28.31■■■□□ 2.12
Efcab1Q9D3N2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Efcab1Q9D3N2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.13■■■□□ 2.09
Efcab1Q9D3N2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Efcab1Q9D3N2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.07■■■□□ 2.08
Efcab1Q9D3N2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.02■■■□□ 2.08
Efcab1Q9D3N2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Efcab1Q9D3N2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
Efcab1Q9D3N2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Efcab1Q9D3N2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Efcab1Q9D3N2 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.85■■■□□ 2.05
Efcab1Q9D3N2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Efcab1Q9D3N2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Efcab1Q9D3N2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.72■■■□□ 2.03
Efcab1Q9D3N2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Efcab1Q9D3N2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Efcab1Q9D3N2 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.66■■■□□ 2.02
Efcab1Q9D3N2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Efcab1Q9D3N2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.56■■■□□ 2
Efcab1Q9D3N2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Efcab1Q9D3N2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Efcab1Q9D3N2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Efcab1Q9D3N2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Efcab1Q9D3N2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Efcab1Q9D3N2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Efcab1Q9D3N2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Efcab1Q9D3N2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Efcab1Q9D3N2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Efcab1Q9D3N2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Efcab1Q9D3N2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Efcab1Q9D3N2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Efcab1Q9D3N2 Gm24109-201ENSMUST00000175489 103 ntBASIC27.02■■□□□ 1.92
Efcab1Q9D3N2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Efcab1Q9D3N2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.92■■□□□ 1.9
Efcab1Q9D3N2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Efcab1Q9D3N2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Efcab1Q9D3N2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Efcab1Q9D3N2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Efcab1Q9D3N2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Efcab1Q9D3N2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Efcab1Q9D3N2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Efcab1Q9D3N2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Efcab1Q9D3N2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Efcab1Q9D3N2 Gm23366-201ENSMUST00000175022 89 ntBASIC26.68■■□□□ 1.86
Efcab1Q9D3N2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Efcab1Q9D3N2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Efcab1Q9D3N2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Efcab1Q9D3N2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Efcab1Q9D3N2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Efcab1Q9D3N2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Efcab1Q9D3N2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.48■■□□□ 1.83
Efcab1Q9D3N2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Efcab1Q9D3N2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Efcab1Q9D3N2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Efcab1Q9D3N2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Efcab1Q9D3N2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Efcab1Q9D3N2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Efcab1Q9D3N2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Efcab1Q9D3N2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Efcab1Q9D3N2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Efcab1Q9D3N2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
Efcab1Q9D3N2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.24■■□□□ 1.79
Efcab1Q9D3N2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Efcab1Q9D3N2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Efcab1Q9D3N2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Efcab1Q9D3N2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Efcab1Q9D3N2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Efcab1Q9D3N2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Efcab1Q9D3N2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Efcab1Q9D3N2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Efcab1Q9D3N2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Efcab1Q9D3N2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26■■□□□ 1.75
Efcab1Q9D3N2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Efcab1Q9D3N2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Efcab1Q9D3N2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms