Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Gm25239-201ENSMUST00000174915 86 ntBASIC32.74■■■□□ 2.83
Vmn1r38Q8R2E1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Vmn1r38Q8R2E1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Vmn1r38Q8R2E1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Vmn1r38Q8R2E1 Psd-208ENSMUST00000224556 2034 ntBASIC30.44■■■□□ 2.46
Vmn1r38Q8R2E1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Vmn1r38Q8R2E1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Vmn1r38Q8R2E1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Vmn1r38Q8R2E1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Vmn1r38Q8R2E1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Vmn1r38Q8R2E1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Vmn1r38Q8R2E1 Gm15042-201ENSMUST00000120212 883 ntBASIC29.38■■■□□ 2.29
Vmn1r38Q8R2E1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Vmn1r38Q8R2E1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Vmn1r38Q8R2E1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Vmn1r38Q8R2E1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Vmn1r38Q8R2E1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.06■■■□□ 2.24
Vmn1r38Q8R2E1 Gm15045-201ENSMUST00000117359 883 ntBASIC28.9■■■□□ 2.22
Vmn1r38Q8R2E1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Vmn1r38Q8R2E1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Vmn1r38Q8R2E1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Vmn1r38Q8R2E1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Vmn1r38Q8R2E1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Vmn1r38Q8R2E1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Vmn1r38Q8R2E1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Vmn1r38Q8R2E1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
Vmn1r38Q8R2E1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Vmn1r38Q8R2E1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Vmn1r38Q8R2E1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.16■■■□□ 2.1
Vmn1r38Q8R2E1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Vmn1r38Q8R2E1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Vmn1r38Q8R2E1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Vmn1r38Q8R2E1 Gm24109-201ENSMUST00000175489 103 ntBASIC28.03■■■□□ 2.08
Vmn1r38Q8R2E1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28■■■□□ 2.07
Vmn1r38Q8R2E1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Vmn1r38Q8R2E1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Vmn1r38Q8R2E1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.82■■■□□ 2.04
Vmn1r38Q8R2E1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Vmn1r38Q8R2E1 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.57■■■□□ 2
Vmn1r38Q8R2E1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Vmn1r38Q8R2E1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Vmn1r38Q8R2E1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Vmn1r38Q8R2E1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.48■■□□□ 1.99
Vmn1r38Q8R2E1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Vmn1r38Q8R2E1 Gm23366-201ENSMUST00000175022 89 ntBASIC27.42■■□□□ 1.98
Vmn1r38Q8R2E1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Vmn1r38Q8R2E1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.37■■□□□ 1.97
Vmn1r38Q8R2E1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Vmn1r38Q8R2E1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Vmn1r38Q8R2E1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Vmn1r38Q8R2E1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Vmn1r38Q8R2E1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Vmn1r38Q8R2E1 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.04■■□□□ 1.92
Vmn1r38Q8R2E1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.03■■□□□ 1.92
Vmn1r38Q8R2E1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Vmn1r38Q8R2E1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vmn1r38Q8R2E1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Vmn1r38Q8R2E1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vmn1r38Q8R2E1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Vmn1r38Q8R2E1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Vmn1r38Q8R2E1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Vmn1r38Q8R2E1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Vmn1r38Q8R2E1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Vmn1r38Q8R2E1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.84■■□□□ 1.89
Vmn1r38Q8R2E1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Vmn1r38Q8R2E1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Vmn1r38Q8R2E1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Vmn1r38Q8R2E1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Vmn1r38Q8R2E1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Vmn1r38Q8R2E1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Vmn1r38Q8R2E1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Vmn1r38Q8R2E1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Vmn1r38Q8R2E1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Vmn1r38Q8R2E1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Vmn1r38Q8R2E1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Vmn1r38Q8R2E1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
Vmn1r38Q8R2E1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Vmn1r38Q8R2E1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Vmn1r38Q8R2E1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
Vmn1r38Q8R2E1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Vmn1r38Q8R2E1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Vmn1r38Q8R2E1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Vmn1r38Q8R2E1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.1■■□□□ 1.77
Vmn1r38Q8R2E1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Vmn1r38Q8R2E1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Vmn1r38Q8R2E1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Vmn1r38Q8R2E1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Vmn1r38Q8R2E1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Vmn1r38Q8R2E1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Vmn1r38Q8R2E1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Vmn1r38Q8R2E1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Vmn1r38Q8R2E1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Vmn1r38Q8R2E1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Vmn1r38Q8R2E1 Gm27325-201ENSMUST00000175467 74 ntBASIC25.9■■□□□ 1.74
Vmn1r38Q8R2E1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Vmn1r38Q8R2E1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Vmn1r38Q8R2E1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Vmn1r38Q8R2E1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.87■■□□□ 1.73
Vmn1r38Q8R2E1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Vmn1r38Q8R2E1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms