RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 KCNC4Q03721 635 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
COL1A2-201ENST00000297268 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
COL1A2-201ENST00000297268 OR2AP1Q8NGE2 309 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 SLC2A13Q96QE2 648 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 ZSCAN5AQ9BUG6 496 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 PLD2O14939 933 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 PDYNP01213 254 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 BCKDHAP12694 445 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 KCNA5P22460 613 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 SH3BP2P78314 561 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 SP3Q02447 781 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 PON2Q15165 354 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 NUS1Q96E22 293 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 MAGIXQ9H6Y5 334 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 MARCH4Q9P2E8 410 aaPredicted RBP13.73□□□□□ -0.21
COL1A2-201ENST00000297268 TAC3Q9UHF0 121 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 ERI3O43414 337 aaKnown RBP13.73□□□□□ -0.21
COL1A2-201ENST00000297268 MLLT10P55197 1068 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 CCSAPQ6IQ19 270 aaPredicted RBP13.73□□□□□ -0.21
COL1A2-201ENST00000297268 SAMD12Q8N8I0 201 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 PCDHGB6Q9Y5F9 930 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 HSPE1-MOB4S4R3N1 261 aa13.73□□□□□ -0.21
COL1A2-201ENST00000297268 RLN2P04090 185 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 ELNP15502 786 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 ARSIQ5FYB1 569 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 KDM1BQ8NB78 822 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 KCT2Q8NC54 265 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 NEIL3Q8TAT5 605 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 SLC22A17Q8WUG5 538 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 UBQLN2Q9UHD9 624 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 MYH7BA7E2Y1 1941 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 NFATC1O95644 943 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 CELP19835 753 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 SP140Q13342 867 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 OR4D1Q15615 310 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 DHRS4Q9BTZ2 278 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 A0A0D9SEW6 157 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 LRRN3E7EW58 273 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 ZNF701M0R085 212 aaPredicted RBP13.72□□□□□ -0.21
COL1A2-201ENST00000297268 SMAD9O15198 467 aaKnown RBP13.72□□□□□ -0.21
COL1A2-201ENST00000297268 CD97P48960 835 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 APLP1P51693 650 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 ZNF763Q0D2J5 394 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 IRAK1BP1Q5VVH5 260 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 C22orf42Q6IC83 251 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 IGFN1Q86VF2 1251 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 PROKR2Q8NFJ6 384 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 RAB8BQ92930 207 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 GAL3ST4Q96RP7 486 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 CD180Q99467 661 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 SYT11Q9BT88 431 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 LRRN3Q9H3W5 708 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 SRMSQ9H3Y6 488 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 EXO5Q9H790 373 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 TAS2R10Q9NYW0 307 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 ERVW-1Q9UQF0 538 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 KRBA1A5PL33 1030 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 CHP2O43745 196 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 MITFO75030 526 aaPredicted RBP13.72□□□□□ -0.21
COL1A2-201ENST00000297268 BCAS1O75363 584 aaPredicted RBP13.72□□□□□ -0.21
COL1A2-201ENST00000297268 PTTG1O95997 202 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 KLHL26Q53HC5 615 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 PNCKQ6P2M8 343 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 THAP6Q8TBB0 222 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 ADAD1Q96M93 576 aaKnown RBP13.72□□□□□ -0.21
COL1A2-201ENST00000297268 PIP5K1AQ99755 562 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 TM9SF2Q99805 663 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 DLGAP4Q9Y2H0 992 aa13.72□□□□□ -0.21
COL1A2-201ENST00000297268 RBMXL2O75526 392 aaKnown RBP13.71□□□□□ -0.21
COL1A2-201ENST00000297268 APOL3O95236 402 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 AGR2O95994 175 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 MT-ND5P03915 603 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 GCAP28676 217 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 ERP29P30040 261 aaKnown RBP13.71□□□□□ -0.21
COL1A2-201ENST00000297268 OR3A3P47888 321 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 OR3A2P47893 321 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 TPRG1Q6ZUI0 275 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 TRIM43Q96BQ3 446 aaPredicted RBP13.71□□□□□ -0.21
COL1A2-201ENST00000297268 CCDC32Q9BV29 185 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 REEP4Q9H6H4 257 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 CPNE5Q9HCH3 593 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 DUS2Q9NX74 493 aaKnown RBP13.71□□□□□ -0.21
COL1A2-201ENST00000297268 MTMR10Q9NXD2 777 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 GNG8Q9UK08 70 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 PROM1O43490 865 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 BEST1O76090 585 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 APODP05090 189 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 CAPN3P20807 821 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 FDXRP22570 491 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 HTR2BP41595 481 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 LRRC32Q14392 662 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 NFE2L1Q14494 772 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 GARNL3Q5VVW2 1013 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 TMED4Q7Z7H5 227 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 TP53INP2Q8IXH6 220 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 YIPF7Q8N8F6 280 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 COQ8AQ8NI60 647 aa13.71□□□□□ -0.21
COL1A2-201ENST00000297268 NDNFQ8TB73 568 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms