RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 PSY2P40164 858 aa-0.29□□□□□ -2.46
snR40snR40 SLS1P42900 643 aa-0.29□□□□□ -2.46
snR40snR40 TNA1P53322 534 aa-0.29□□□□□ -2.46
snR40snR40 CTR9P89105 1077 aa-0.29□□□□□ -2.46
snR40snR40 ADD37Q03233 198 aa-0.29□□□□□ -2.46
snR40snR40 FRE5Q08908 694 aa-0.29□□□□□ -2.46
snR40snR40 COBP00163 385 aa-0.3□□□□□ -2.46
snR40snR40 VAN1P23642 535 aa-0.3□□□□□ -2.46
snR40snR40 CAD1P24813 409 aaKnown RBP-0.3□□□□□ -2.46
snR40snR40 SIS2P36024 562 aa-0.3□□□□□ -2.46
snR40snR40 YBL036CP38197 257 aa-0.3□□□□□ -2.46
snR40snR40 PCL5P38794 229 aa-0.3□□□□□ -2.46
snR40snR40 PSA1P41940 361 aaKnown RBP-0.3□□□□□ -2.46
snR40snR40 ROM1P53046 1155 aa-0.3□□□□□ -2.46
snR40snR40 ISC10P32645 267 aa-0.31□□□□□ -2.46
snR40snR40 KTR2P33550 425 aa-0.31□□□□□ -2.46
snR40snR40 RRT2P38332 387 aa-0.31□□□□□ -2.46
snR40snR40 NEM1P38757 446 aa-0.31□□□□□ -2.46
snR40snR40 NCS6P53088 359 aa-0.31□□□□□ -2.46
snR40snR40 DAM1P53267 343 aa-0.31□□□□□ -2.46
snR40snR40 YNR021WP53723 404 aaKnown RBP-0.31□□□□□ -2.46
snR40snR40 MAP1Q01662 387 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
snR40snR40 HOS3Q02959 697 aaKnown RBP-0.31□□□□□ -2.46
snR40snR40 MBR1P23493 339 aa-0.32□□□□□ -2.46
snR40snR40 DUR3P33413 735 aa-0.32□□□□□ -2.46
snR40snR40 RAD55P38953 406 aa-0.32□□□□□ -2.46
snR40snR40 SCW4P53334 386 aaKnown RBP-0.32□□□□□ -2.46
snR40snR40 ERG5P54781 538 aa-0.32□□□□□ -2.46
snR40snR40 RTT103Q05543 409 aa-0.32□□□□□ -2.46
snR40snR40 ADY4Q05955 493 aa-0.32□□□□□ -2.46
snR40snR40 LAP2Q10740 671 aa-0.32□□□□□ -2.46
snR40snR40 SVS1Q12254 260 aa-0.32□□□□□ -2.46
snR40snR40 TAF3Q12297 353 aa-0.32□□□□□ -2.46
snR40snR40 TRS33Q99394 268 aa-0.32□□□□□ -2.46
snR40snR40 SPB4P25808 606 aaPredicted RBP-0.33□□□□□ -2.46
snR40snR40 BIO2P32451 375 aa-0.33□□□□□ -2.46
snR40snR40 EUG1P32474 517 aa-0.33□□□□□ -2.46
snR40snR40 YGL176CP46945 554 aa-0.33□□□□□ -2.46
snR40snR40 FCP1Q03254 732 aa-0.33□□□□□ -2.46
snR40snR40 AIM7Q12156 149 aa-0.33□□□□□ -2.46
snR40snR40 EXO5P38289 585 aa-0.34□□□□□ -2.46
snR40snR40 MRK1P50873 501 aa-0.34□□□□□ -2.46
snR40snR40 REV1P12689 985 aa-0.35□□□□□ -2.47
snR40snR40 PEP12P32854 288 aa-0.35□□□□□ -2.47
snR40snR40 ASK1P35734 292 aa-0.35□□□□□ -2.47
snR40snR40 YJL206CP39529 758 aa-0.35□□□□□ -2.47
snR40snR40 CCT7P42943 550 aaKnown RBP-0.35□□□□□ -2.47
snR40snR40 SAP155P43612 1002 aa-0.35□□□□□ -2.47
snR40snR40 SHE10P53075 577 aa-0.35□□□□□ -2.47
snR40snR40 YNL108CP53929 270 aa-0.35□□□□□ -2.47
snR40snR40 SLK19Q08581 821 aaKnown RBP-0.35□□□□□ -2.47
snR40snR40 SPC97P38863 823 aa-0.36□□□□□ -2.47
snR40snR40 ZRG8P40021 1076 aa-0.36□□□□□ -2.47
snR40snR40 URM1P40554 99 aaPredicted RBP-0.36□□□□□ -2.47
snR40snR40 SKP2P42843 763 aa-0.36□□□□□ -2.47
snR40snR40 VPS53P47061 822 aa-0.36□□□□□ -2.47
snR40snR40 YGL260WP53056 76 aa-0.36□□□□□ -2.47
snR40snR40 RIA1P53893 1110 aa-0.36□□□□□ -2.47
snR40snR40 UTP5Q04177 643 aaKnown RBP-0.36□□□□□ -2.47
snR40snR40 MRX10Q05648 414 aa-0.36□□□□□ -2.47
snR40snR40 SAN1P22470 610 aa-0.37□□□□□ -2.47
snR40snR40 KIP1P28742 1111 aa-0.37□□□□□ -2.47
snR40snR40 YKL077WP36081 392 aa-0.37□□□□□ -2.47
snR40snR40 MRPL4P36517 319 aa-0.37□□□□□ -2.47
snR40snR40 HXT13P39924 564 aa-0.37□□□□□ -2.47
snR40snR40 RPN3P40016 523 aaKnown RBP-0.37□□□□□ -2.47
snR40snR40 PCI8P40512 444 aa-0.37□□□□□ -2.47
snR40snR40 MTR4P47047 1073 aaKnown RBP-0.37□□□□□ -2.47
snR40snR40 HXT16P47185 567 aa-0.37□□□□□ -2.47
snR40snR40 HXT17P53631 564 aa-0.37□□□□□ -2.47
snR40snR40 HXT15P54854 567 aa-0.37□□□□□ -2.47
snR40snR40 ATG13Q06628 738 aa-0.37□□□□□ -2.47
snR40snR40 XKS1P42826 600 aa-0.38□□□□□ -2.47
snR40snR40 RSA1Q08932 381 aa-0.38□□□□□ -2.47
snR40snR40 PHR1P05066 565 aaKnown RBP RIP-Chip data-0.39□□□□□ -2.47not detected
snR40snR40 GAL2P13181 574 aa-0.39□□□□□ -2.47
snR40snR40 ATS1P31386 333 aa-0.39□□□□□ -2.47
snR40snR40 ELO3P40319 345 aa-0.39□□□□□ -2.47
snR40snR40 YAF9P53930 226 aa-0.39□□□□□ -2.47
snR40snR40 BUD7Q08754 746 aa-0.39□□□□□ -2.47
snR40snR40 SPE1P08432 466 aa-0.4□□□□□ -2.47
snR40snR40 MET3P08536 511 aa-0.4□□□□□ -2.47
snR40snR40 SRD1P09007 221 aa-0.4□□□□□ -2.47
snR40snR40 ENA1P13587 1091 aa-0.4□□□□□ -2.47
snR40snR40 PRP16P15938 1071 aaPredicted RBP-0.4□□□□□ -2.47
snR40snR40 SMC1P32908 1225 aa-0.4□□□□□ -2.47
snR40snR40 LYS9P38999 446 aa-0.4□□□□□ -2.47
snR40snR40 CCT5P40413 562 aaKnown RBP-0.4□□□□□ -2.47
snR40snR40 ATG32P40458 529 aa-0.4□□□□□ -2.47
snR40snR40 YFL054CP43549 646 aa-0.4□□□□□ -2.47
snR40snR40 SUT1P53032 299 aaKnown RBP-0.4□□□□□ -2.47
snR40snR40 YNR063WP53749 607 aa-0.4□□□□□ -2.47
snR40snR40 ENA2Q01896 1091 aa-0.4□□□□□ -2.47
snR40snR40 SLU7Q02775 382 aaKnown RBP-0.4□□□□□ -2.47
snR40snR40 DLT1Q04216 342 aa-0.4□□□□□ -2.47
snR40snR40 MLH3Q12083 715 aa-0.4□□□□□ -2.47
snR40snR40 ENA5Q12691 1091 aa-0.4□□□□□ -2.47
snR40snR40 ECM2P38241 364 aaKnown RBP-0.41□□□□□ -2.48
snR40snR40 CBR1P38626 284 aaKnown RBP-0.41□□□□□ -2.48
snR40snR40 YEL068CP39977 110 aa-0.41□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms