RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W SRM1P21827 482 aa6.99□□□□□ -1.29
VPS28YPL065W ALD6P54115 500 aaKnown RBP6.99□□□□□ -1.29
VPS28YPL065W URN1Q06525 465 aaKnown RBP6.99□□□□□ -1.29
VPS28YPL065W PIN2Q12057 282 aa6.99□□□□□ -1.29
VPS28YPL065W RIB2Q12362 591 aaKnown RBP6.99□□□□□ -1.29
VPS28YPL065W RPL11BQ3E757 174 aaPredicted RBP6.99□□□□□ -1.29
VPS28YPL065W ACE2P21192 770 aa6.98□□□□□ -1.29
VPS28YPL065W STE11P23561 717 aa6.98□□□□□ -1.29
VPS28YPL065W CDC20P26309 610 aa6.98□□□□□ -1.29
VPS28YPL065W VAC8P39968 578 aa6.98□□□□□ -1.29
VPS28YPL065W SPP382Q06411 708 aaPredicted RBP6.98□□□□□ -1.29
VPS28YPL065W LYP1P32487 611 aa6.97□□□□□ -1.29
VPS28YPL065W MXR1P40029 184 aa6.97□□□□□ -1.29
VPS28YPL065W CLN2P20438 545 aa6.96□□□□□ -1.3
VPS28YPL065W MNR2P35724 969 aa6.96□□□□□ -1.3
VPS28YPL065W ORC1P54784 914 aaPredicted RBP6.96□□□□□ -1.3
VPS28YPL065W MSC2Q03455 724 aa6.96□□□□□ -1.3
VPS28YPL065W SNF7P39929 240 aaKnown RBP6.95□□□□□ -1.3
VPS28YPL065W MNN10P50108 393 aaKnown RBP6.95□□□□□ -1.3
VPS28YPL065W TRP2P00899 507 aaKnown RBP6.94□□□□□ -1.3
VPS28YPL065W CDC34P14682 295 aa6.94□□□□□ -1.3
VPS28YPL065W TRM2P33753 639 aa6.94□□□□□ -1.3
VPS28YPL065W PNT1P38969 423 aa6.94□□□□□ -1.3
VPS28YPL065W CWC24P53769 259 aa6.94□□□□□ -1.3
VPS28YPL065W BI4P03879 638 aa6.93□□□□□ -1.3
VPS28YPL065W CDC6P09119 513 aa6.93□□□□□ -1.3
VPS28YPL065W SLA2P33338 968 aa6.93□□□□□ -1.3
VPS28YPL065W GTF1P53260 183 aaPredicted RBP6.93□□□□□ -1.3
VPS28YPL065W VPS62P53285 467 aa6.93□□□□□ -1.3
VPS28YPL065W PNS1Q12412 539 aa6.93□□□□□ -1.3
VPS28YPL065W RKM4Q12504 494 aa6.93□□□□□ -1.3
VPS28YPL065W RPP2AP05319 106 aaKnown RBP6.92□□□□□ -1.3
VPS28YPL065W LST4P34239 828 aa6.92□□□□□ -1.3
VPS28YPL065W MCM6P53091 1017 aaKnown RBP6.92□□□□□ -1.3
VPS28YPL065W TYW3P53177 273 aa6.92□□□□□ -1.3
VPS28YPL065W NOP12Q08208 459 aaKnown RBP6.92□□□□□ -1.3
VPS28YPL065W DBP2P24783 546 aaKnown RBP6.91□□□□□ -1.3
VPS28YPL065W HCM1P25364 564 aa6.91□□□□□ -1.3
VPS28YPL065W DUT1P33317 147 aa6.91□□□□□ -1.3
VPS28YPL065W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
VPS28YPL065W SPO20Q04359 397 aa6.91□□□□□ -1.3
VPS28YPL065W TMA10Q06177 86 aa6.91□□□□□ -1.3
VPS28YPL065W INO1P11986 533 aa6.9□□□□□ -1.3
VPS28YPL065W YKL107WP34251 309 aa6.9□□□□□ -1.3
VPS28YPL065W OCA5P38738 679 aa6.9□□□□□ -1.3
VPS28YPL065W FAA4P47912 694 aaKnown RBP6.9□□□□□ -1.3
VPS28YPL065W GDE1Q02979 1223 aa6.9□□□□□ -1.3
VPS28YPL065W YAP6Q03935 383 aa6.9□□□□□ -1.3
VPS28YPL065W YLR224WQ05947 369 aa6.9□□□□□ -1.3
VPS28YPL065W HMI1Q12039 706 aa6.9□□□□□ -1.3
VPS28YPL065W EMC1P25574 760 aa6.89□□□□□ -1.31
VPS28YPL065W KRI1P42846 591 aaKnown RBP6.89□□□□□ -1.31
VPS28YPL065W NNF1P47149 201 aa6.89□□□□□ -1.31
VPS28YPL065W MND2P40577 368 aa6.88□□□□□ -1.31
VPS28YPL065W HFM1P51979 1187 aa6.88□□□□□ -1.31
VPS28YPL065W EEB1Q02891 456 aa6.88□□□□□ -1.31
VPS28YPL065W POA1P38218 177 aa6.87□□□□□ -1.31
VPS28YPL065W ZRG8P40021 1076 aa6.87□□□□□ -1.31
VPS28YPL065W SSF2Q12153 453 aaPredicted RBP6.87□□□□□ -1.31
VPS28YPL065W OSW2Q12202 724 aa6.87□□□□□ -1.31
VPS28YPL065W MOT2P34909 587 aaKnown RBP6.86□□□□□ -1.31
VPS28YPL065W YGL176CP46945 554 aa6.86□□□□□ -1.31
VPS28YPL065W MSE1P48525 536 aa6.86□□□□□ -1.31
VPS28YPL065W GCV2P49095 1034 aa6.86□□□□□ -1.31
VPS28YPL065W TPO1Q07824 586 aa6.86□□□□□ -1.31
VPS28YPL065W PUS9Q12069 462 aa6.86□□□□□ -1.31
VPS28YPL065W WRS1Q12109 432 aaKnown RBP6.86□□□□□ -1.31
VPS28YPL065W YLL058WQ12198 575 aa6.86□□□□□ -1.31
VPS28YPL065W ENA1P13587 1091 aa6.85□□□□□ -1.31
VPS28YPL065W PRI2P20457 528 aa6.85□□□□□ -1.31
VPS28YPL065W PMI40P29952 429 aaKnown RBP6.85□□□□□ -1.31
VPS28YPL065W IOC3P43596 787 aa6.85□□□□□ -1.31
VPS28YPL065W MET12P46151 657 aa6.85□□□□□ -1.31
VPS28YPL065W YGR053CP53234 283 aa6.85□□□□□ -1.31
VPS28YPL065W ENA2Q01896 1091 aa6.85□□□□□ -1.31
VPS28YPL065W NTO1Q12311 748 aa6.85□□□□□ -1.31
VPS28YPL065W ENA5Q12691 1091 aa6.85□□□□□ -1.31
VPS28YPL065W PIN4P34217 668 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
VPS28YPL065W YPL066WQ12194 479 aa6.84□□□□□ -1.31
VPS28YPL065W MTC3P53077 123 aa6.83□□□□□ -1.32
VPS28YPL065W ADY3Q07732 790 aa6.83□□□□□ -1.32
VPS28YPL065W YTA7P40340 1379 aa6.82□□□□□ -1.32
VPS28YPL065W HIS5P07172 385 aa6.82□□□□□ -1.32
VPS28YPL065W DCG1P32460 244 aa6.82□□□□□ -1.32
VPS28YPL065W YAP1801P38856 637 aa6.82□□□□□ -1.32
VPS28YPL065W OPI10Q08202 246 aa6.82□□□□□ -1.32
VPS28YPL065W PMA1P05030 918 aaKnown RBP6.81□□□□□ -1.32
VPS28YPL065W YKL069WP36088 180 aa6.81□□□□□ -1.32
VPS28YPL065W PLB1P39105 664 aa6.81□□□□□ -1.32
VPS28YPL065W SIP5P40210 489 aaKnown RBP6.81□□□□□ -1.32
VPS28YPL065W AIM21P40563 679 aa6.81□□□□□ -1.32
VPS28YPL065W YLR225CQ05948 407 aaKnown RBP6.81□□□□□ -1.32
VPS28YPL065W MDM38Q08179 573 aa6.81□□□□□ -1.32
VPS28YPL065W FAL1Q12099 399 aaKnown RBP6.81□□□□□ -1.32
VPS28YPL065W YOL098CQ12496 1037 aa6.81□□□□□ -1.32
VPS28YPL065W PSP2P50109 593 aaKnown RBP6.8□□□□□ -1.32
VPS28YPL065W XYL2Q07993 356 aa6.8□□□□□ -1.32
VPS28YPL065W GRX1P25373 110 aaKnown RBP6.79□□□□□ -1.32
VPS28YPL065W FUN30P31380 1131 aa6.79□□□□□ -1.32
VPS28YPL065W YGR012WP53206 393 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 96.5 ms