RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W ICL1P28240 557 aaPredicted RBP5.25□□□□□ -1.57
RET3YPL010W SMY2P32909 740 aaKnown RBP5.25□□□□□ -1.57
RET3YPL010W SER1P33330 395 aaKnown RBP5.25□□□□□ -1.57
RET3YPL010W LRG1P35688 1017 aa5.25□□□□□ -1.57
RET3YPL010W NNK1P36003 928 aa5.25□□□□□ -1.57
RET3YPL010W CIC1P38779 376 aaKnown RBP5.25□□□□□ -1.57
RET3YPL010W RAT1Q02792 1006 aaKnown RBP5.25□□□□□ -1.57
RET3YPL010W ERO1Q03103 563 aa5.25□□□□□ -1.57
RET3YPL010W RMT2Q03305 412 aa5.25□□□□□ -1.57
RET3YPL010W HIM1Q06674 414 aa5.25□□□□□ -1.57
RET3YPL010W TY1A-GR1Q12085 440 aa5.25□□□□□ -1.57
RET3YPL010W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.25□□□□□ -1.57
RET3YPL010W TY1A-OLQ92392 440 aaKnown RBP5.25□□□□□ -1.57
RET3YPL010W YKL077WP36081 392 aa5.24□□□□□ -1.57
RET3YPL010W UBP5P39944 805 aa5.24□□□□□ -1.57
RET3YPL010W DSD1P53095 428 aa5.24□□□□□ -1.57
RET3YPL010W DIB1Q06819 143 aaPredicted RBP5.24□□□□□ -1.57
RET3YPL010W ALG6Q12001 544 aaKnown RBP5.24□□□□□ -1.57
RET3YPL010W YVC1Q12324 675 aa5.24□□□□□ -1.57
RET3YPL010W SNF2P22082 1703 aa5.23□□□□□ -1.57
RET3YPL010W KAR2P16474 682 aaKnown RBP5.23□□□□□ -1.57
RET3YPL010W NFS1P25374 497 aa5.23□□□□□ -1.57
RET3YPL010W SEG2P34250 1132 aa5.23□□□□□ -1.57
RET3YPL010W POL12P38121 705 aaPredicted RBP5.23□□□□□ -1.57
RET3YPL010W ETP1P38748 585 aaKnown RBP5.23□□□□□ -1.57
RET3YPL010W PEX7P39108 375 aa5.23□□□□□ -1.57
RET3YPL010W YFR016CP43597 1233 aaKnown RBP5.23□□□□□ -1.57
RET3YPL010W BDF2Q07442 638 aa5.23□□□□□ -1.57
RET3YPL010W TRE1Q08919 783 aa5.23□□□□□ -1.57
RET3YPL010W MSM1P22438 575 aa5.22□□□□□ -1.57
RET3YPL010W ADP1P25371 1049 aa5.22□□□□□ -1.57
RET3YPL010W HSP78P33416 811 aa5.22□□□□□ -1.57
RET3YPL010W VPS35P34110 944 aa5.22□□□□□ -1.57
RET3YPL010W EAR1Q03212 550 aa5.22□□□□□ -1.57
RET3YPL010W AVO1Q08236 1176 aa5.22□□□□□ -1.57
RET3YPL010W GRX6Q12438 231 aa5.22□□□□□ -1.57
RET3YPL010W NUP145P49687 1317 aa5.22□□□□□ -1.57
RET3YPL010W AUS1Q08409 1394 aa5.21□□□□□ -1.58
RET3YPL010W NEM1P38757 446 aa5.21□□□□□ -1.58
RET3YPL010W SLS1P42900 643 aa5.21□□□□□ -1.58
RET3YPL010W MON1P53129 644 aa5.21□□□□□ -1.58
RET3YPL010W ELA1P53861 379 aaPredicted RBP5.21□□□□□ -1.58
RET3YPL010W POM152P39685 1337 aa5.21□□□□□ -1.58
RET3YPL010W PHO4P07270 312 aaKnown RBP5.2□□□□□ -1.58
RET3YPL010W RNQ1P25367 405 aa5.2□□□□□ -1.58
RET3YPL010W GCD6P32501 712 aaKnown RBP5.2□□□□□ -1.58
RET3YPL010W TSA1P34760 196 aaKnown RBP5.2□□□□□ -1.58
RET3YPL010W PAP2P53632 584 aaKnown RBP5.2□□□□□ -1.58
RET3YPL010W SSP2Q08646 371 aa5.2□□□□□ -1.58
RET3YPL010W YLR278CQ05854 1341 aa5.2□□□□□ -1.58
RET3YPL010W KCC4P25389 1037 aa5.19□□□□□ -1.58
RET3YPL010W PPX1P38698 397 aa5.19□□□□□ -1.58
RET3YPL010W YHL050CP38721 697 aa5.19□□□□□ -1.58
RET3YPL010W YHR219WP38900 624 aa5.19□□□□□ -1.58
RET3YPL010W YGL082WP53155 381 aa5.19□□□□□ -1.58
RET3YPL010W LPX1Q12405 387 aaKnown RBP5.19□□□□□ -1.58
RET3YPL010W VMA4P22203 233 aaKnown RBP5.18□□□□□ -1.58
RET3YPL010W AKL1P38080 1108 aaKnown RBP5.18□□□□□ -1.58
RET3YPL010W SSF1P38789 453 aaPredicted RBP5.18□□□□□ -1.58
RET3YPL010W YAR028WP39548 234 aa5.18□□□□□ -1.58
RET3YPL010W SSY1Q03770 852 aa5.18□□□□□ -1.58
RET3YPL010W UTP5Q04177 643 aaKnown RBP5.18□□□□□ -1.58
RET3YPL010W PUS7Q08647 676 aaKnown RBP5.18□□□□□ -1.58
RET3YPL010W CAF20P12962 161 aaKnown RBP5.17□□□□□ -1.58
RET3YPL010W STM1P39015 273 aaKnown RBP5.17□□□□□ -1.58
RET3YPL010W PEA2P40091 420 aa5.17□□□□□ -1.58
RET3YPL010W YIL089WP40500 205 aa5.17□□□□□ -1.58
RET3YPL010W TIM50Q02776 476 aa5.17□□□□□ -1.58
RET3YPL010W CDA2Q06703 312 aa5.17□□□□□ -1.58
RET3YPL010W ALE1Q08548 619 aa5.17□□□□□ -1.58
RET3YPL010W MSH3P25336 1018 aa5.16□□□□□ -1.58
RET3YPL010W RDH54P38086 958 aa5.16□□□□□ -1.58
RET3YPL010W HSE1P38753 452 aa5.16□□□□□ -1.58
RET3YPL010W RKM2Q03942 479 aa5.16□□□□□ -1.58
RET3YPL010W SYF1Q04048 859 aaPredicted RBP5.16□□□□□ -1.58
RET3YPL010W PRO1P32264 428 aa5.15□□□□□ -1.59
RET3YPL010W MET4P32389 672 aa5.15□□□□□ -1.59
RET3YPL010W FRD1P32614 470 aaKnown RBP5.15□□□□□ -1.59
RET3YPL010W PDS5Q04264 1277 aa5.15□□□□□ -1.59
RET3YPL010W NSE3Q05541 303 aa5.15□□□□□ -1.59
RET3YPL010W MSC6Q08818 692 aaKnown RBP5.15□□□□□ -1.59
RET3YPL010W SAM35P14693 329 aa5.14□□□□□ -1.59
RET3YPL010W GAS1P22146 559 aaKnown RBP5.14□□□□□ -1.59
RET3YPL010W ULP1Q02724 621 aa5.14□□□□□ -1.59
RET3YPL010W TPP1Q03796 238 aa5.14□□□□□ -1.59
RET3YPL010W CRF1Q04930 467 aa5.14□□□□□ -1.59
RET3YPL010W YLR257WQ06146 321 aaKnown RBP5.14□□□□□ -1.59
RET3YPL010W HRK1Q08732 759 aaKnown RBP5.14□□□□□ -1.59
RET3YPL010W LAP2Q10740 671 aa5.14□□□□□ -1.59
RET3YPL010W MDL2P33311 773 aa5.13□□□□□ -1.59
RET3YPL010W PTC7P38797 343 aa5.13□□□□□ -1.59
RET3YPL010W NCS6P53088 359 aa5.13□□□□□ -1.59
RET3YPL010W YGR117CP53270 476 aa5.13□□□□□ -1.59
RET3YPL010W TRM44Q02648 567 aaKnown RBP5.13□□□□□ -1.59
RET3YPL010W RSA3Q05942 220 aaKnown RBP5.13□□□□□ -1.59
RET3YPL010W YIL177CP40434 1758 aa5.13□□□□□ -1.59
RET3YPL010W YJL225CP40889 1758 aa5.13□□□□□ -1.59
RET3YPL010W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
RET3YPL010W SRO9P25567 434 aaKnown RBP5.12□□□□□ -1.59
RET3YPL010W YCR015CP25616 317 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms