RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W RER2P35196 286 aa5.17□□□□□ -1.58
HSH49YOR319W SPF1P39986 1215 aaKnown RBP5.17□□□□□ -1.58
HSH49YOR319W HNT2P49775 206 aa5.17□□□□□ -1.58
HSH49YOR319W CLU1Q03690 1277 aaKnown RBP5.17□□□□□ -1.58
HSH49YOR319W GIS1Q03833 894 aa5.17□□□□□ -1.58
HSH49YOR319W OPI10Q08202 246 aa5.17□□□□□ -1.58
HSH49YOR319W PRI2P20457 528 aa5.16□□□□□ -1.58
HSH49YOR319W MCM7P38132 845 aa5.16□□□□□ -1.58
HSH49YOR319W KRI1P42846 591 aaKnown RBP5.16□□□□□ -1.58
HSH49YOR319W TIF35Q04067 274 aaKnown RBP5.16□□□□□ -1.58
HSH49YOR319W FAL1Q12099 399 aaKnown RBP5.16□□□□□ -1.58
HSH49YOR319W RAD4P14736 754 aa5.15□□□□□ -1.59
HSH49YOR319W ABZ1P37254 787 aaPredicted RBP5.15□□□□□ -1.59
HSH49YOR319W SHM2P37291 469 aaKnown RBP5.15□□□□□ -1.59
HSH49YOR319W MPH1P40562 993 aa5.15□□□□□ -1.59
HSH49YOR319W TIM54P47045 478 aa5.15□□□□□ -1.59
HSH49YOR319W HUL5P53119 910 aa5.15□□□□□ -1.59
HSH49YOR319W PRE10P21242 288 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
HSH49YOR319W RFC5P38251 354 aa5.14□□□□□ -1.59
HSH49YOR319W YFL054CP43549 646 aa5.14□□□□□ -1.59
HSH49YOR319W POB3Q04636 552 aaKnown RBP5.14□□□□□ -1.59
HSH49YOR319W PPM2Q08282 695 aa5.14□□□□□ -1.59
HSH49YOR319W CYC1P00044 109 aaPredicted RBP5.13□□□□□ -1.59
HSH49YOR319W TUB2P02557 457 aaKnown RBP5.13□□□□□ -1.59
HSH49YOR319W CTS1P29029 562 aa5.13□□□□□ -1.59
HSH49YOR319W YKL069WP36088 180 aa5.13□□□□□ -1.59
HSH49YOR319W EEB1Q02891 456 aa5.13□□□□□ -1.59
HSH49YOR319W RSM24Q03976 319 aa5.13□□□□□ -1.59
HSH49YOR319W SGD1Q06132 899 aa5.13□□□□□ -1.59
HSH49YOR319W GNT1Q12096 491 aa5.13□□□□□ -1.59
HSH49YOR319W BAS1P22035 811 aa5.12□□□□□ -1.59
HSH49YOR319W LYP1P32487 611 aa5.12□□□□□ -1.59
HSH49YOR319W CHZ1P40019 153 aaPredicted RBP5.12□□□□□ -1.59
HSH49YOR319W TYW3P53177 273 aa5.12□□□□□ -1.59
HSH49YOR319W SVS1Q12254 260 aa5.12□□□□□ -1.59
HSH49YOR319W TRP2P00899 507 aaKnown RBP5.11□□□□□ -1.59
HSH49YOR319W MET6P05694 767 aaKnown RBP5.11□□□□□ -1.59
HSH49YOR319W KIN2P13186 1147 aaKnown RBP5.11□□□□□ -1.59
HSH49YOR319W AGP1P25376 633 aa5.11□□□□□ -1.59
HSH49YOR319W YHR020WP38708 688 aaKnown RBP5.11□□□□□ -1.59
HSH49YOR319W LAM1P38851 1228 aa5.11□□□□□ -1.59
HSH49YOR319W NUP82P40368 713 aa5.11□□□□□ -1.59
HSH49YOR319W SPT20P50875 604 aa5.11□□□□□ -1.59
HSH49YOR319W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
HSH49YOR319W SPO20Q04359 397 aa5.11□□□□□ -1.59
HSH49YOR319W UTP14Q04500 899 aaKnown RBP5.11□□□□□ -1.59
HSH49YOR319W YLR125WQ12138 136 aa5.11□□□□□ -1.59
HSH49YOR319W MRP8P35719 219 aa5.1□□□□□ -1.59
HSH49YOR319W MXR1P40029 184 aa5.1□□□□□ -1.59
HSH49YOR319W YGL081WP53156 320 aa5.1□□□□□ -1.59
HSH49YOR319W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
HSH49YOR319W YDR132CQ03900 495 aa5.1□□□□□ -1.59
HSH49YOR319W SHE9Q04172 456 aa5.1□□□□□ -1.59
HSH49YOR319W SPP382Q06411 708 aaPredicted RBP5.1□□□□□ -1.59
HSH49YOR319W SPO75Q07798 868 aa5.1□□□□□ -1.59
HSH49YOR319W ACM1Q08981 209 aa5.1□□□□□ -1.59
HSH49YOR319W OSH2Q12451 1283 aa5.1□□□□□ -1.59
HSH49YOR319W RPL11AP0C0W9 174 aaKnown RBP5.09□□□□□ -1.59
HSH49YOR319W PHO8P11491 566 aa5.09□□□□□ -1.59
HSH49YOR319W INO1P11986 533 aa5.09□□□□□ -1.59
HSH49YOR319W CMP2P14747 604 aa5.09□□□□□ -1.59
HSH49YOR319W GAL11P19659 1081 aa5.09□□□□□ -1.59
HSH49YOR319W APL1P27351 700 aa5.09□□□□□ -1.59
HSH49YOR319W SBA1P28707 216 aaKnown RBP5.09□□□□□ -1.59
HSH49YOR319W TIM23P32897 222 aa5.09□□□□□ -1.59
HSH49YOR319W UGA2P38067 497 aa5.09□□□□□ -1.59
HSH49YOR319W MPT5P39016 859 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
HSH49YOR319W MNN1P39106 762 aa5.09□□□□□ -1.59
HSH49YOR319W MEF2P39677 819 aa5.09□□□□□ -1.59
HSH49YOR319W GCN5Q03330 439 aa5.09□□□□□ -1.59
HSH49YOR319W ROT1Q03691 256 aa5.09□□□□□ -1.59
HSH49YOR319W FLC1Q08967 793 aa5.09□□□□□ -1.59
HSH49YOR319W PNS1Q12412 539 aa5.09□□□□□ -1.59
HSH49YOR319W YGR161W-CQ3E744 92 aa5.09□□□□□ -1.59
HSH49YOR319W RPL11BQ3E757 174 aaPredicted RBP5.09□□□□□ -1.59
HSH49YOR319W THS1P04801 734 aaKnown RBP5.08□□□□□ -1.6
HSH49YOR319W MOT2P34909 587 aaKnown RBP5.08□□□□□ -1.6
HSH49YOR319W GGA2P38817 585 aaKnown RBP5.08□□□□□ -1.6
HSH49YOR319W GEM1P39722 662 aa5.08□□□□□ -1.6
HSH49YOR319W ATG13Q06628 738 aa5.08□□□□□ -1.6
HSH49YOR319W RKM4Q12504 494 aa5.08□□□□□ -1.6
HSH49YOR319W GAL10P04397 699 aa5.07□□□□□ -1.6
HSH49YOR319W HSP60P19882 572 aaKnown RBP5.07□□□□□ -1.6
HSH49YOR319W YBR184WP38299 523 aa5.07□□□□□ -1.6
HSH49YOR319W RSP5P39940 809 aaKnown RBP5.07□□□□□ -1.6
HSH49YOR319W IRR1P40541 1150 aa5.07□□□□□ -1.6
HSH49YOR319W ERP6P53198 216 aa5.07□□□□□ -1.6
HSH49YOR319W YGR125WP53273 1036 aa5.07□□□□□ -1.6
HSH49YOR319W DBP2P24783 546 aaKnown RBP5.06□□□□□ -1.6
HSH49YOR319W TSR4P25040 408 aa5.06□□□□□ -1.6
HSH49YOR319W STE5P32917 917 aa5.06□□□□□ -1.6
HSH49YOR319W YKL107WP34251 309 aa5.06□□□□□ -1.6
HSH49YOR319W PNT1P38969 423 aa5.06□□□□□ -1.6
HSH49YOR319W SNF7P39929 240 aaKnown RBP5.06□□□□□ -1.6
HSH49YOR319W RRT14P40470 206 aa5.06□□□□□ -1.6
HSH49YOR319W YGL176CP46945 554 aa5.06□□□□□ -1.6
HSH49YOR319W PLB2Q03674 706 aa5.06□□□□□ -1.6
HSH49YOR319W FMP25Q08023 583 aa5.06□□□□□ -1.6
HSH49YOR319W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
HSH49YOR319W BI4P03879 638 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms