RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C VPS8P39702 1274 aa6.19□□□□□ -1.42
NUP1YOR098C PAP2P53632 584 aaKnown RBP6.19□□□□□ -1.42
NUP1YOR098C GTR1Q00582 310 aa6.19□□□□□ -1.42
NUP1YOR098C ATG2P53855 1592 aa6.19□□□□□ -1.42
NUP1YOR098C SFL1P20134 766 aa6.18□□□□□ -1.42
NUP1YOR098C MLF3P32047 452 aa6.18□□□□□ -1.42
NUP1YOR098C ECM2P38241 364 aaKnown RBP6.18□□□□□ -1.42
NUP1YOR098C YGL176CP46945 554 aa6.18□□□□□ -1.42
NUP1YOR098C IML2P47031 731 aa6.18□□□□□ -1.42
NUP1YOR098C TRS130Q03660 1102 aa6.18□□□□□ -1.42
NUP1YOR098C TIF35Q04067 274 aaKnown RBP6.18□□□□□ -1.42
NUP1YOR098C MLP2P40457 1679 aa6.18□□□□□ -1.42
NUP1YOR098C MSD1P15179 658 aaKnown RBP6.18□□□□□ -1.42
NUP1YOR098C SAP155P43612 1002 aa6.18□□□□□ -1.42
NUP1YOR098C CLF1Q12309 687 aaPredicted RBP6.18□□□□□ -1.42
NUP1YOR098C MKS1P34072 584 aa6.18□□□□□ -1.42
NUP1YOR098C TAN1P53072 289 aaPredicted RBP6.18□□□□□ -1.42
NUP1YOR098C TY1B-AO13527 1196 aaKnown RBP6.17□□□□□ -1.42
NUP1YOR098C YTM1Q12024 460 aaPredicted RBP6.17□□□□□ -1.42
NUP1YOR098C PYC2P32327 1180 aaKnown RBP6.17□□□□□ -1.42
NUP1YOR098C PIN4P34217 668 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
NUP1YOR098C SYH1Q02875 849 aaKnown RBP6.17□□□□□ -1.42
NUP1YOR098C EMG1Q06287 252 aaKnown RBP6.17□□□□□ -1.42
NUP1YOR098C IMH1Q06704 911 aaKnown RBP6.17□□□□□ -1.42
NUP1YOR098C ANP1P32629 500 aa6.16□□□□□ -1.42
NUP1YOR098C CNN1P43618 361 aa6.16□□□□□ -1.42
NUP1YOR098C ERO1Q03103 563 aa6.16□□□□□ -1.42
NUP1YOR098C OPY2Q06810 360 aa6.16□□□□□ -1.42
NUP1YOR098C STE6P12866 1290 aa6.16□□□□□ -1.42
NUP1YOR098C MSM1P22438 575 aa6.16□□□□□ -1.42
NUP1YOR098C HEM12P32347 362 aaPredicted RBP6.16□□□□□ -1.42
NUP1YOR098C VPH1P32563 840 aaKnown RBP6.16□□□□□ -1.42
NUP1YOR098C VMA8P32610 256 aaKnown RBP6.16□□□□□ -1.42
NUP1YOR098C YKL107WP34251 309 aa6.16□□□□□ -1.42
NUP1YOR098C AIM46P38885 310 aa6.16□□□□□ -1.42
NUP1YOR098C CKB2P38930 258 aa6.16□□□□□ -1.42
NUP1YOR098C MEP1P40260 492 aa6.16□□□□□ -1.42
NUP1YOR098C YGR016WP53209 190 aa6.16□□□□□ -1.42
NUP1YOR098C CAF120P53836 1060 aa6.16□□□□□ -1.42
NUP1YOR098C PMT7Q06644 662 aa6.16□□□□□ -1.42
NUP1YOR098C RKM4Q12504 494 aa6.16□□□□□ -1.42
NUP1YOR098C MSH3P25336 1018 aa6.16□□□□□ -1.42
NUP1YOR098C DOM34P33309 386 aa6.16□□□□□ -1.42
NUP1YOR098C GIP1P38229 639 aa6.16□□□□□ -1.42
NUP1YOR098C QRI7P43122 407 aa6.16□□□□□ -1.42
NUP1YOR098C CTF4Q01454 927 aa6.16□□□□□ -1.42
NUP1YOR098C SPN1Q06505 410 aaPredicted RBP6.16□□□□□ -1.42
NUP1YOR098C STO1P34160 861 aaKnown RBP6.15□□□□□ -1.42
NUP1YOR098C GPI8P49018 411 aa6.15□□□□□ -1.42
NUP1YOR098C CIA1Q05583 330 aa6.15□□□□□ -1.42
NUP1YOR098C PHR1P05066 565 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
NUP1YOR098C PPH3P32345 308 aa6.15□□□□□ -1.43
NUP1YOR098C SPC29P33419 253 aa6.15□□□□□ -1.43
NUP1YOR098C RDH54P38086 958 aa6.15□□□□□ -1.43
NUP1YOR098C NOG1Q02892 647 aaKnown RBP6.15□□□□□ -1.43
NUP1YOR098C PUS1Q12211 544 aaKnown RBP6.15□□□□□ -1.43
NUP1YOR098C PDR10P51533 1564 aa6.14□□□□□ -1.43
NUP1YOR098C SEC3P33332 1336 aaKnown RBP6.14□□□□□ -1.43
NUP1YOR098C HSP82P02829 709 aaKnown RBP6.14□□□□□ -1.43
NUP1YOR098C PRT1P06103 763 aaKnown RBP6.14□□□□□ -1.43
NUP1YOR098C BRF1P29056 596 aa6.14□□□□□ -1.43
NUP1YOR098C YKL050CP35736 922 aa6.14□□□□□ -1.43
NUP1YOR098C ALG2P43636 503 aa6.14□□□□□ -1.43
NUP1YOR098C WSC3Q12215 556 aa6.14□□□□□ -1.43
NUP1YOR098C RMP1Q12530 201 aa6.14□□□□□ -1.43
NUP1YOR098C PFK1P16861 987 aaKnown RBP6.14□□□□□ -1.43
NUP1YOR098C PAT1P25644 796 aaKnown RBP6.14□□□□□ -1.43
NUP1YOR098C PET10P36139 283 aa6.14□□□□□ -1.43
NUP1YOR098C GZF3P42944 551 aaKnown RBP6.14□□□□□ -1.43
NUP1YOR098C SGM1P47166 707 aa6.14□□□□□ -1.43
NUP1YOR098C HOS2P53096 452 aaPredicted RBP6.14□□□□□ -1.43
NUP1YOR098C YNR063WP53749 607 aa6.14□□□□□ -1.43
NUP1YOR098C SRP1Q02821 542 aaKnown RBP6.14□□□□□ -1.43
NUP1YOR098C RCF1Q03713 159 aa6.14□□□□□ -1.43
NUP1YOR098C YMR018WQ04364 514 aa6.14□□□□□ -1.43
NUP1YOR098C YOR296WQ08748 1289 aa6.14□□□□□ -1.43
NUP1YOR098C YPR071WQ12346 211 aa6.14□□□□□ -1.43
NUP1YOR098C PEX5P35056 612 aa6.14□□□□□ -1.43
NUP1YOR098C BIT2P38346 545 aa6.14□□□□□ -1.43
NUP1YOR098C BCD1P38772 366 aa6.14□□□□□ -1.43
NUP1YOR098C AOS1Q06624 347 aa6.14□□□□□ -1.43
NUP1YOR098C PHO81P17442 1178 aa6.13□□□□□ -1.43
NUP1YOR098C SAN1P22470 610 aa6.13□□□□□ -1.43
NUP1YOR098C YEL1P34225 687 aa6.13□□□□□ -1.43
NUP1YOR098C NOP4P37838 685 aaKnown RBP6.13□□□□□ -1.43
NUP1YOR098C ENT3P47160 408 aa6.13□□□□□ -1.43
NUP1YOR098C GUD1Q07729 489 aa6.13□□□□□ -1.43
NUP1YOR098C DED1P06634 604 aaKnown RBP6.13□□□□□ -1.43
NUP1YOR098C YER152CP10356 443 aa6.13□□□□□ -1.43
NUP1YOR098C NAT1P12945 854 aaKnown RBP6.13□□□□□ -1.43
NUP1YOR098C IRE1P32361 1115 aa6.13□□□□□ -1.43
NUP1YOR098C DFG5Q05031 458 aa6.13□□□□□ -1.43
NUP1YOR098C EIS1Q05050 843 aaKnown RBP6.13□□□□□ -1.43
NUP1YOR098C TPM1P17536 199 aaKnown RBP6.12□□□□□ -1.43
NUP1YOR098C RPC31P17890 251 aa6.12□□□□□ -1.43
NUP1YOR098C PCM1P38628 557 aaKnown RBP6.12□□□□□ -1.43
NUP1YOR098C KAP122P32767 1081 aa6.12□□□□□ -1.43
NUP1YOR098C RIM11P38615 370 aa6.12□□□□□ -1.43
NUP1YOR098C SIP5P40210 489 aaKnown RBP6.12□□□□□ -1.43
NUP1YOR098C IDI1P15496 288 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms