RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP6	YOR001W	NPP1	P25353	742 aa		2.75	□□□□□ -1.97
RRP6	YOR001W	PWP2	P25635	923 aa	Known RBP	2.75	□□□□□ -1.97
RRP6	YOR001W	KNS1	P32350	737 aa	Predicted RBP	2.75	□□□□□ -1.97
RRP6	YOR001W	YKL151C	P36059	337 aa		2.75	□□□□□ -1.97
RRP6	YOR001W	NIT1	P40447	199 aa		2.75	□□□□□ -1.97
RRP6	YOR001W	YMR187C	Q03236	431 aa		2.75	□□□□□ -1.97
RRP6	YOR001W	MTQ2	Q03920	221 aa	Predicted RBP	2.75	□□□□□ -1.97
RRP6	YOR001W	YDL121C	Q07541	149 aa		2.75	□□□□□ -1.97
RRP6	YOR001W	SLX4	Q12098	748 aa		2.75	□□□□□ -1.97
RRP6	YOR001W	TOM70	P07213	617 aa	Known RBP	2.74	□□□□□ -1.97
RRP6	YOR001W	PLC1	P32383	869 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	SPC29	P33419	253 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	GYP8	P43570	497 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	MET13	P53128	600 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	GUP1	P53154	560 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	TDA6	Q06466	467 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	YPR071W	Q12346	211 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	PDC5	P16467	563 aa	Known RBP	2.74	□□□□□ -1.97
RRP6	YOR001W	CDC12	P32468	407 aa	Known RBP	2.74	□□□□□ -1.97
RRP6	YOR001W	MTC2	P34246	357 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	BAP2	P38084	609 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	DSS1	P39112	969 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	SBE2	P42223	864 aa	Known RBP	2.74	□□□□□ -1.97
RRP6	YOR001W	GCV1	P48015	400 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	SDA1	P53313	767 aa	Known RBP	2.74	□□□□□ -1.97
RRP6	YOR001W	MEC3	Q02574	474 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	YDR306C	Q06640	478 aa		2.74	□□□□□ -1.97
RRP6	YOR001W	ATP4	P05626	244 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	RPL11A	P0C0W9	174 aa	Known RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	RAD53	P22216	821 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	MIH1	P23748	554 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	TYS1	P36421	394 aa	Known RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	RRP8	P38961	392 aa	Known RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	GEM1	P39722	662 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	POL5	P39985	1022 aa	Known RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	NPP2	P39997	493 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	TOK1	P40310	691 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	ALG2	P43636	503 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	CEF1	Q03654	590 aa	Predicted RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	SPP382	Q06411	708 aa	Predicted RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	PTC5	Q12511	572 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	RPL11B	Q3E757	174 aa	Predicted RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	TMA7	Q3E764	64 aa	Known RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	HIR1	P32479	840 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	MXR1	P40029	184 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	NEO1	P40527	1151 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	YFL066C	P43538	392 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	YFL054C	P43549	646 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	YJR096W	P47137	282 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	YRB30	P53107	440 aa	Predicted RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	YNR063W	P53749	607 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	ECM16	Q04217	1267 aa	Known RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	HRQ1	Q05549	1077 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	FAP7	Q12055	197 aa	Predicted RBP	2.73	□□□□□ -1.97
RRP6	YOR001W	MPD2	Q99316	277 aa		2.73	□□□□□ -1.97
RRP6	YOR001W	KAR1	P11927	433 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	ERS1	P17261	260 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	SFL1	P20134	766 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	TRX2	P22803	104 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	SCT1	P32784	759 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	DOM34	P33309	386 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	SLA2	P33338	968 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	MCD4	P36051	919 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	MCX1	P38323	520 aa	Predicted RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	PCM1	P38628	557 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	PEA2	P40091	420 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	PEX14	P53112	341 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	YGR283C	P53336	341 aa	Predicted RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	DUS3	Q06053	668 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	RAD18	P10862	487 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	SST2	P11972	698 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	NAR1	P23503	491 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	TFC4	P33339	1025 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	YEL1	P34225	687 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	YAR028W	P39548	234 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	SAH1	P39954	449 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	NIT2	P47016	307 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	KIP3	P53086	805 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	YGR021W	P53212	290 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	YGR045C	P53229	120 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	SOK2	P53438	785 aa	Predicted RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	LCD1	Q04377	747 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	RSA3	Q05942	220 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	ALG6	Q12001	544 aa	Known RBP	2.72	□□□□□ -1.97
RRP6	YOR001W	ENV7	Q12003	364 aa		2.72	□□□□□ -1.97
RRP6	YOR001W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
RRP6	YOR001W	RPA135	P22138	1203 aa	Known RBP	2.71	□□□□□ -1.98
RRP6	YOR001W	KIP1	P28742	1111 aa		2.71	□□□□□ -1.98
RRP6	YOR001W	AAR2	P32357	355 aa	Predicted RBP	2.71	□□□□□ -1.98
RRP6	YOR001W	DAL3	P32459	195 aa		2.71	□□□□□ -1.98
RRP6	YOR001W	TAT1	P38085	619 aa		2.71	□□□□□ -1.98
RRP6	YOR001W	ALG14	P38242	237 aa		2.71	□□□□□ -1.98
RRP6	YOR001W	REI1	P38344	393 aa	Predicted RBP	2.71	□□□□□ -1.98
RRP6	YOR001W	TSL1	P38427	1098 aa	Known RBP	2.71	□□□□□ -1.98
RRP6	YOR001W	QNS1	P38795	714 aa	Known RBP	2.71	□□□□□ -1.98
RRP6	YOR001W	OAF1	P39720	1047 aa	Predicted RBP	2.71	□□□□□ -1.98
RRP6	YOR001W	GPP2	P40106	250 aa	Known RBP	2.71	□□□□□ -1.98
RRP6	YOR001W	LEM3	P42838	414 aa		2.71	□□□□□ -1.98
RRP6	YOR001W	CAF16	P43569	289 aa		2.71	□□□□□ -1.98
RRP6	YOR001W	HXT16	P47185	567 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms