RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C ERP6P53198 216 aa3.66□□□□□ -1.82
RPB11YOL005C TPO2P53283 614 aa3.66□□□□□ -1.82
RPB11YOL005C RGA2Q06407 1009 aa3.66□□□□□ -1.82
RPB11YOL005C SVS1Q12254 260 aa3.66□□□□□ -1.82
RPB11YOL005C HSP60P19882 572 aaKnown RBP3.65□□□□□ -1.83
RPB11YOL005C RPL8BP29453 256 aaKnown RBP3.65□□□□□ -1.83
RPB11YOL005C BAP2P38084 609 aa3.65□□□□□ -1.83
RPB11YOL005C RFC5P38251 354 aa3.65□□□□□ -1.83
RPB11YOL005C OCA5P38738 679 aa3.65□□□□□ -1.83
RPB11YOL005C CCC2P38995 1004 aa3.65□□□□□ -1.83
RPB11YOL005C IOC3P43596 787 aa3.65□□□□□ -1.83
RPB11YOL005C INP52P50942 1183 aa3.65□□□□□ -1.83
RPB11YOL005C NSE3Q05541 303 aa3.65□□□□□ -1.83
RPB11YOL005C FMP25Q08023 583 aa3.65□□□□□ -1.83
RPB11YOL005C THS1P04801 734 aaKnown RBP3.64□□□□□ -1.83
RPB11YOL005C STI1P15705 589 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
RPB11YOL005C SLA2P33338 968 aa3.64□□□□□ -1.83
RPB11YOL005C YRO2P38079 344 aa3.64□□□□□ -1.83
RPB11YOL005C YBR284WP38150 797 aa3.64□□□□□ -1.83
RPB11YOL005C ETP1P38748 585 aaKnown RBP3.64□□□□□ -1.83
RPB11YOL005C CTH1P47976 325 aa3.64□□□□□ -1.83
RPB11YOL005C SRP1Q02821 542 aaKnown RBP3.64□□□□□ -1.83
RPB11YOL005C BDF2Q07442 638 aa3.64□□□□□ -1.83
RPB11YOL005C YOR352WQ08816 343 aa3.64□□□□□ -1.83
RPB11YOL005C APL1P27351 700 aa3.63□□□□□ -1.83
RPB11YOL005C TAT2P38967 592 aa3.63□□□□□ -1.83
RPB11YOL005C HUL4P40985 892 aa3.63□□□□□ -1.83
RPB11YOL005C SEC26P41810 973 aaKnown RBP3.63□□□□□ -1.83
RPB11YOL005C PFD1P46988 109 aa3.63□□□□□ -1.83
RPB11YOL005C RSM24Q03976 319 aa3.63□□□□□ -1.83
RPB11YOL005C HRQ1Q05549 1077 aa3.63□□□□□ -1.83
RPB11YOL005C FLC1Q08967 793 aa3.63□□□□□ -1.83
RPB11YOL005C LPX1Q12405 387 aaKnown RBP3.63□□□□□ -1.83
RPB11YOL005C YTA7P40340 1379 aa3.63□□□□□ -1.83
RPB11YOL005C CIT1P00890 479 aa3.62□□□□□ -1.83
RPB11YOL005C ADE8P04161 214 aa3.62□□□□□ -1.83
RPB11YOL005C CMP2P14747 604 aa3.62□□□□□ -1.83
RPB11YOL005C CDC11P32458 415 aa3.62□□□□□ -1.83
RPB11YOL005C YPR196WQ06595 470 aa3.62□□□□□ -1.83
RPB11YOL005C YDL124WQ07551 312 aaKnown RBP3.62□□□□□ -1.83
RPB11YOL005C OSW2Q12202 724 aa3.62□□□□□ -1.83
RPB11YOL005C KIN2P13186 1147 aaKnown RBP3.61□□□□□ -1.83
RPB11YOL005C GAL11P19659 1081 aa3.61□□□□□ -1.83
RPB11YOL005C LRG1P35688 1017 aa3.61□□□□□ -1.83
RPB11YOL005C PBP2P38151 413 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
RPB11YOL005C RSP5P39940 809 aaKnown RBP3.61□□□□□ -1.83
RPB11YOL005C UTP8P53276 713 aaKnown RBP3.61□□□□□ -1.83
RPB11YOL005C MDM38Q08179 573 aa3.61□□□□□ -1.83
RPB11YOL005C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
RPB11YOL005C YPR071WQ12346 211 aa3.61□□□□□ -1.83
RPB11YOL005C DFG16Q99234 619 aa3.61□□□□□ -1.83
RPB11YOL005C CYC1P00044 109 aaPredicted RBP3.6□□□□□ -1.83
RPB11YOL005C TOM70P07213 617 aaKnown RBP3.6□□□□□ -1.83
RPB11YOL005C ENA1P13587 1091 aa3.6□□□□□ -1.83
RPB11YOL005C ACE2P21192 770 aa3.6□□□□□ -1.83
RPB11YOL005C CDC12P32468 407 aaKnown RBP3.6□□□□□ -1.83
RPB11YOL005C YKL151CP36059 337 aa3.6□□□□□ -1.83
RPB11YOL005C YHR020WP38708 688 aaKnown RBP3.6□□□□□ -1.83
RPB11YOL005C RRT14P40470 206 aa3.6□□□□□ -1.83
RPB11YOL005C GUS1P46655 708 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
RPB11YOL005C HFM1P51979 1187 aa3.6□□□□□ -1.83
RPB11YOL005C ENA2Q01896 1091 aa3.6□□□□□ -1.83
RPB11YOL005C ENA5Q12691 1091 aa3.6□□□□□ -1.83
RPB11YOL005C HBS1P32769 611 aaKnown RBP3.59□□□□□ -1.83
RPB11YOL005C PPG1P32838 368 aa3.59□□□□□ -1.83
RPB11YOL005C ERT1P38140 529 aa3.59□□□□□ -1.83
RPB11YOL005C ROT1Q03691 256 aa3.59□□□□□ -1.83
RPB11YOL005C HBN1Q96VH4 193 aa3.59□□□□□ -1.83
RPB11YOL005C CAN1P04817 590 aa3.58□□□□□ -1.84
RPB11YOL005C TOP3P13099 656 aa3.58□□□□□ -1.84
RPB11YOL005C MSD1P15179 658 aaKnown RBP3.58□□□□□ -1.84
RPB11YOL005C GAS1P22146 559 aaKnown RBP3.58□□□□□ -1.84
RPB11YOL005C TIM23P32897 222 aa3.58□□□□□ -1.84
RPB11YOL005C SEG2P34250 1132 aa3.58□□□□□ -1.84
RPB11YOL005C ABZ1P37254 787 aaPredicted RBP3.58□□□□□ -1.84
RPB11YOL005C GIC1P38785 314 aa3.58□□□□□ -1.84
RPB11YOL005C GGA2P38817 585 aaKnown RBP3.58□□□□□ -1.84
RPB11YOL005C YER158CP40095 573 aa3.58□□□□□ -1.84
RPB11YOL005C OSW7P43611 510 aa3.58□□□□□ -1.84
RPB11YOL005C GTF1P53260 183 aaPredicted RBP3.58□□□□□ -1.84
RPB11YOL005C NRD1P53617 575 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84 RIP-Chip
RPB11YOL005C SNO2P53823 222 aa3.58□□□□□ -1.84
RPB11YOL005C MRPL22P53881 309 aa3.58□□□□□ -1.84
RPB11YOL005C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84 RIP-Chip
RPB11YOL005C SRT1Q03175 343 aa3.58□□□□□ -1.84
RPB11YOL005C TAF8Q03750 510 aa3.58□□□□□ -1.84
RPB11YOL005C LCD1Q04377 747 aa3.58□□□□□ -1.84
RPB11YOL005C ATG13Q06628 738 aa3.58□□□□□ -1.84
RPB11YOL005C GAL10P04397 699 aa3.57□□□□□ -1.84
RPB11YOL005C ERR1P0CX10 437 aa3.57□□□□□ -1.84
RPB11YOL005C ERR2P0CX11 437 aa3.57□□□□□ -1.84
RPB11YOL005C NPP1P25353 742 aa3.57□□□□□ -1.84
RPB11YOL005C SRP101P32916 621 aa3.57□□□□□ -1.84
RPB11YOL005C DOM34P33309 386 aa3.57□□□□□ -1.84
RPB11YOL005C CHZ1P40019 153 aaPredicted RBP3.57□□□□□ -1.84
RPB11YOL005C MTC3P53077 123 aa3.57□□□□□ -1.84
RPB11YOL005C ENV11P53246 860 aa3.57□□□□□ -1.84
RPB11YOL005C SFB2P53953 876 aa3.57□□□□□ -1.84
RPB11YOL005C ORC3P54790 616 aa3.57□□□□□ -1.84
RPB11YOL005C RPN4Q03465 531 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms