RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeast

Gene SWM2, Length 441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWM2	YNR004W	SYP1	P25623	870 aa	Known RBP	4.31	□□□□□ -1.72
SWM2	YNR004W	MET4	P32389	672 aa		4.31	□□□□□ -1.72
SWM2	YNR004W	RRT14	P40470	206 aa		4.31	□□□□□ -1.72
SWM2	YNR004W	CNN1	P43618	361 aa		4.31	□□□□□ -1.72
SWM2	YNR004W	MCH5	Q08777	521 aa		4.31	□□□□□ -1.72
SWM2	YNR004W	KCS1	Q12494	1050 aa		4.31	□□□□□ -1.72
SWM2	YNR004W	BI4	P03879	638 aa		4.3	□□□□□ -1.72
SWM2	YNR004W	ENT3	P47160	408 aa		4.3	□□□□□ -1.72
SWM2	YNR004W	TMN2	Q04562	672 aa		4.3	□□□□□ -1.72
SWM2	YNR004W	EFT1	P32324	842 aa	Known RBP	4.29	□□□□□ -1.72
SWM2	YNR004W	CHA4	P43634	648 aa		4.29	□□□□□ -1.72
SWM2	YNR004W	HFM1	P51979	1187 aa		4.29	□□□□□ -1.72
SWM2	YNR004W	YOL073C	Q08232	322 aa		4.29	□□□□□ -1.72
SWM2	YNR004W	DBP5	P20449	482 aa	Known RBP	4.28	□□□□□ -1.72
SWM2	YNR004W	SUL1	P38359	859 aa		4.28	□□□□□ -1.72
SWM2	YNR004W	MXR1	P40029	184 aa		4.28	□□□□□ -1.72
SWM2	YNR004W	YLR040C	Q07988	224 aa		4.28	□□□□□ -1.72
SWM2	YNR004W	ACM1	Q08981	209 aa		4.28	□□□□□ -1.72
SWM2	YNR004W	RPT1	P33299	467 aa	Known RBP	4.27	□□□□□ -1.73
SWM2	YNR004W	OMS1	Q06668	471 aa		4.27	□□□□□ -1.73
SWM2	YNR004W	ENB1	Q08299	606 aa		4.27	□□□□□ -1.73
SWM2	YNR004W	PRE9	P23638	258 aa	Known RBP	4.26	□□□□□ -1.73
SWM2	YNR004W	SEC8	P32855	1065 aa		4.26	□□□□□ -1.73
SWM2	YNR004W	MCD1	Q12158	566 aa		4.26	□□□□□ -1.73
SWM2	YNR004W	NPC2	Q12408	173 aa		4.26	□□□□□ -1.73
SWM2	YNR004W	PPX1	P38698	397 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	HXT13	P39924	564 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	MPH1	P40562	993 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	STB4	P50104	949 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	HXT17	P53631	564 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	HXT15	P54854	567 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	TIM44	Q01852	431 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	MRL1	Q06815	381 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	XYL2	Q07993	356 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	IRC10	Q08118	586 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	LAS17	Q12446	633 aa		4.25	□□□□□ -1.73
SWM2	YNR004W	THS1	P04801	734 aa	Known RBP	4.24	□□□□□ -1.73
SWM2	YNR004W	RPL11A	P0C0W9	174 aa	Known RBP	4.24	□□□□□ -1.73
SWM2	YNR004W	MRPS18	P42847	217 aa		4.24	□□□□□ -1.73
SWM2	YNR004W	YMR206W	Q03695	313 aa		4.24	□□□□□ -1.73
SWM2	YNR004W	RPL11B	Q3E757	174 aa	Predicted RBP	4.24	□□□□□ -1.73
SWM2	YNR004W	SPE1	P08432	466 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	SLA2	P33338	968 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	MCM7	P38132	845 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	THI12	P42883	340 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	THI5	P43534	340 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	THI11	P47183	340 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	BUL1	P48524	976 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	YGR012W	P53206	393 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	THI13	Q07748	340 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	GNT1	Q12096	491 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	ACF2	Q12168	779 aa		4.23	□□□□□ -1.73
SWM2	YNR004W	KTR4	P38131	464 aa		4.22	□□□□□ -1.73
SWM2	YNR004W	GEM1	P39722	662 aa		4.22	□□□□□ -1.73
SWM2	YNR004W	YER158C	P40095	573 aa		4.22	□□□□□ -1.73
SWM2	YNR004W	GNP1	P48813	663 aa		4.22	□□□□□ -1.73
SWM2	YNR004W	CAD1	P24813	409 aa	Known RBP	4.21	□□□□□ -1.74
SWM2	YNR004W	CCC2	P38995	1004 aa		4.21	□□□□□ -1.74
SWM2	YNR004W	PSP2	P50109	593 aa	Known RBP	4.21	□□□□□ -1.74
SWM2	YNR004W	OSW2	Q12202	724 aa		4.21	□□□□□ -1.74
SWM2	YNR004W	DBP2	P24783	546 aa	Known RBP	4.2	□□□□□ -1.74
SWM2	YNR004W	KAR4	P25583	335 aa		4.2	□□□□□ -1.74
SWM2	YNR004W	SRP101	P32916	621 aa		4.2	□□□□□ -1.74
SWM2	YNR004W	YAP1801	P38856	637 aa		4.2	□□□□□ -1.74
SWM2	YNR004W	YGR122W	P53272	402 aa		4.2	□□□□□ -1.74
SWM2	YNR004W	CDA1	Q06702	301 aa		4.2	□□□□□ -1.74
SWM2	YNR004W	WHI5	Q12416	295 aa		4.2	□□□□□ -1.74
SWM2	YNR004W	ERG4	P25340	473 aa		4.19	□□□□□ -1.74
SWM2	YNR004W	MTH1	P35198	433 aa		4.19	□□□□□ -1.74
SWM2	YNR004W	GEF1	P37020	779 aa		4.19	□□□□□ -1.74
SWM2	YNR004W	NCS6	P53088	359 aa		4.19	□□□□□ -1.74
SWM2	YNR004W	NDJ1	Q12366	352 aa		4.19	□□□□□ -1.74
SWM2	YNR004W	PEX2	P32800	271 aa		4.18	□□□□□ -1.74
SWM2	YNR004W	GND2	P53319	492 aa		4.18	□□□□□ -1.74
SWM2	YNR004W	SPP382	Q06411	708 aa	Predicted RBP	4.18	□□□□□ -1.74
SWM2	YNR004W	SPC42	P36094	363 aa		4.17	□□□□□ -1.74
SWM2	YNR004W	RNT1	Q02555	471 aa		4.17	□□□□□ -1.74
SWM2	YNR004W	MUK1	Q02866	612 aa		4.17	□□□□□ -1.74
SWM2	YNR004W	TIF35	Q04067	274 aa	Known RBP	4.17	□□□□□ -1.74
SWM2	YNR004W	GUP2	Q08929	609 aa		4.17	□□□□□ -1.74
SWM2	YNR004W	RAD2	P07276	1031 aa		4.16	□□□□□ -1.74
SWM2	YNR004W	MSC6	Q08818	692 aa	Known RBP	4.16	□□□□□ -1.74
SWM2	YNR004W	GCR1	P07261	785 aa		4.15	□□□□□ -1.75
SWM2	YNR004W	HSF1	P10961	833 aa		4.15	□□□□□ -1.75
SWM2	YNR004W	ATG19	P35193	415 aa		4.15	□□□□□ -1.75
SWM2	YNR004W	PNT1	P38969	423 aa		4.15	□□□□□ -1.75
SWM2	YNR004W	STM1	P39015	273 aa	Known RBP	4.15	□□□□□ -1.75
SWM2	YNR004W	URM1	P40554	99 aa	Predicted RBP	4.15	□□□□□ -1.75
SWM2	YNR004W	MTC3	P53077	123 aa		4.15	□□□□□ -1.75
SWM2	YNR004W	WHI4	Q07655	649 aa	Known RBP	4.14	□□□□□ -1.75
SWM2	YNR004W	AFT2	Q08957	416 aa		4.14	□□□□□ -1.75
SWM2	YNR004W	TRP4	P07285	380 aa	Predicted RBP	4.13	□□□□□ -1.75
SWM2	YNR004W	SLD2	P34252	453 aa		4.13	□□□□□ -1.75
SWM2	YNR004W	RER2	P35196	286 aa		4.13	□□□□□ -1.75
SWM2	YNR004W	PPR1	P07272	904 aa	Predicted RBP	4.12	□□□□□ -1.75
SWM2	YNR004W	CYC8	P14922	966 aa		4.12	□□□□□ -1.75
SWM2	YNR004W	ECM21	P38167	1117 aa	Known RBP	4.12	□□□□□ -1.75
SWM2	YNR004W	SSF1	P38789	453 aa	Predicted RBP	4.12	□□□□□ -1.75
SWM2	YNR004W	ALG7	P07286	448 aa		4.11	□□□□□ -1.75
SWM2	YNR004W	RAD27	P26793	382 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 125.4 ms