RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	ALT2	P52892	507 aa		3.54	□□□□□ -1.84
SKP2	YNL311C	YGR122W	P53272	402 aa		3.54	□□□□□ -1.84
SKP2	YNL311C	RPN7	Q06103	429 aa	Known RBP	3.54	□□□□□ -1.84
SKP2	YNL311C	MRI1	Q06489	411 aa	Known RBP	3.54	□□□□□ -1.84
SKP2	YNL311C	YLR422W	Q06409	1932 aa		3.54	□□□□□ -1.84
SKP2	YNL311C	CLB5	P30283	435 aa		3.54	□□□□□ -1.84
SKP2	YNL311C	LEU5	P38702	357 aa		3.54	□□□□□ -1.84
SKP2	YNL311C	YAP1801	P38856	637 aa		3.54	□□□□□ -1.84
SKP2	YNL311C	PCF11	P39081	626 aa	Predicted RBP	3.54	□□□□□ -1.84
SKP2	YNL311C	PSP2	P50109	593 aa	Known RBP	3.54	□□□□□ -1.84
SKP2	YNL311C	CLF1	Q12309	687 aa	Predicted RBP	3.54	□□□□□ -1.84
SKP2	YNL311C	MPD2	Q99316	277 aa		3.54	□□□□□ -1.84
SKP2	YNL311C	RPS14A	P06367	137 aa	Known RBP	3.53	□□□□□ -1.84
SKP2	YNL311C	UBC1	P21734	215 aa	Known RBP	3.53	□□□□□ -1.84
SKP2	YNL311C	SFP1	P32432	683 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	FPR3	P38911	411 aa	Known RBP	3.53	□□□□□ -1.84
SKP2	YNL311C	RPS14B	P39516	138 aa	Known RBP	3.53	□□□□□ -1.84
SKP2	YNL311C	VPS8	P39702	1274 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	VID27	P40157	782 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	MID1	P41821	548 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	YPP1	P46951	817 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	IRC8	P47046	822 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	ENP2	P48234	707 aa	Known RBP	3.53	□□□□□ -1.84
SKP2	YNL311C	ARH1	P48360	493 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	LSB1	P53281	241 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	CDC53	Q12018	815 aa	Known RBP	3.53	□□□□□ -1.84
SKP2	YNL311C	RKM4	Q12504	494 aa		3.53	□□□□□ -1.84
SKP2	YNL311C	CET1	O13297	549 aa	Predicted RBP	3.53	□□□□□ -1.85
SKP2	YNL311C	TVP38	P36164	337 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	VRP1	P37370	817 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	SOL3	P38858	249 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	YIR016W	P40572	265 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	MAF1	P41910	395 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	GYP8	P43570	497 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	UBP15	P50101	1230 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	HUL5	P53119	910 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	YGR273C	P53329	174 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	YNL134C	P53912	376 aa	Known RBP	3.53	□□□□□ -1.85
SKP2	YNL311C	YAT1	P80235	687 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	STP1	Q00947	519 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	MUK1	Q02866	612 aa		3.53	□□□□□ -1.85
SKP2	YNL311C	MSH2	P25847	964 aa		3.52	□□□□□ -1.85
SKP2	YNL311C	MRF1	P30775	413 aa	Predicted RBP	3.52	□□□□□ -1.85
SKP2	YNL311C	CSE1	P33307	960 aa		3.52	□□□□□ -1.85
SKP2	YNL311C	YHL026C	P38740	315 aa		3.52	□□□□□ -1.85
SKP2	YNL311C	NEM1	P38757	446 aa		3.52	□□□□□ -1.85
SKP2	YNL311C	MDM1	Q01846	1127 aa		3.52	□□□□□ -1.85
SKP2	YNL311C	TMN2	Q04562	672 aa		3.52	□□□□□ -1.85
SKP2	YNL311C	UTP4	Q06679	776 aa	Known RBP	3.52	□□□□□ -1.85
SKP2	YNL311C	SPE3	Q12074	293 aa	Known RBP	3.52	□□□□□ -1.85
SKP2	YNL311C	PCD1	Q12524	340 aa		3.52	□□□□□ -1.85
SKP2	YNL311C	FMP27	Q06179	2628 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	RAD2	P07276	1031 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	SPT23	P35210	1082 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	YEL025C	P39991	1188 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	FOL1	P53848	824 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	SSL1	Q04673	461 aa	Predicted RBP	3.51	□□□□□ -1.85
SKP2	YNL311C	MRD1	Q06106	887 aa	Known RBP	3.51	□□□□□ -1.85
SKP2	YNL311C	PEX1	P24004	1043 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	RAD27	P26793	382 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	CSM2	P40465	213 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	CWC24	P53769	259 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	OSH2	Q12451	1283 aa		3.51	□□□□□ -1.85
SKP2	YNL311C	BI4	P03879	638 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	ATP1	P07251	545 aa	Known RBP	3.5	□□□□□ -1.85
SKP2	YNL311C	SPE1	P08432	466 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	VPH1	P32563	840 aa	Known RBP	3.5	□□□□□ -1.85
SKP2	YNL311C	YHL050C	P38721	697 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	XDJ1	P39102	459 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	TAF1	P46677	1066 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	CSL4	P53859	292 aa	Predicted RBP	3.5	□□□□□ -1.85
SKP2	YNL311C	YHM2	Q04013	314 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	SDH5	Q08230	162 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	PDH1	Q12428	516 aa	Known RBP	3.5	□□□□□ -1.85
SKP2	YNL311C	ADE2	P21264	571 aa	Known RBP	3.5	□□□□□ -1.85
SKP2	YNL311C	UGA4	P32837	571 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	DID4	P36108	232 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	CCL1	P37366	393 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	POL12	P38121	705 aa	Predicted RBP	3.5	□□□□□ -1.85
SKP2	YNL311C	HAP5	Q02516	242 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	YML083C	Q04526	418 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	HFI1	Q12060	488 aa		3.5	□□□□□ -1.85
SKP2	YNL311C	RPS19A	P07280	144 aa	Known RBP	3.49	□□□□□ -1.85
SKP2	YNL311C	RPS19B	P07281	144 aa	Predicted RBP	3.49	□□□□□ -1.85
SKP2	YNL311C	NUC1	P08466	329 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	OCA5	P38738	679 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	PPE1	P38796	400 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	ILV3	P39522	585 aa	Known RBP	3.49	□□□□□ -1.85
SKP2	YNL311C	SDS3	P40505	327 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	TUB4	P53378	473 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	VPS30	Q02948	557 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	KAR5	Q04746	504 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	YLR326W	Q06170	240 aa	Known RBP	3.49	□□□□□ -1.85
SKP2	YNL311C	JIP5	Q06214	492 aa	Predicted RBP	3.49	□□□□□ -1.85
SKP2	YNL311C	PTP1	P25044	335 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	UBX7	P38349	436 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	RAD55	P38953	406 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	SLN1	P39928	1220 aa	Predicted RBP	3.49	□□□□□ -1.85
SKP2	YNL311C	JJJ3	P47138	172 aa		3.49	□□□□□ -1.85
SKP2	YNL311C	CTR1	P49573	406 aa		3.49	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms