RNA–Protein interactions for RNA: YNL308C

KRI1, Transcript of Essential nucleolar protein required for 40S ribosome biogenesis, yeast

Gene KRI1, Length 1,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRI1	YNL308C	CIT2	P08679	460 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	HVG1	P0CE11	249 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
KRI1	YNL308C	SEC14	P24280	304 aa	Known RBP	4.09	□□□□□ -1.75
KRI1	YNL308C	ELM1	P32801	640 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	MFT1	P33441	392 aa	Known RBP	4.09	□□□□□ -1.75
KRI1	YNL308C	SQT1	P35184	431 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	NEO1	P40527	1151 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	GUP1	P53154	560 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	TIM50	Q02776	476 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	YPL062W	Q02781	134 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	VPS16	Q03308	798 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	RPN4	Q03465	531 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
KRI1	YNL308C	ARO80	Q04052	950 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	UBX2	Q04228	584 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	NSE3	Q05541	303 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	PSK1	P31374	1356 aa		4.09	□□□□□ -1.75
KRI1	YNL308C	NAR1	P23503	491 aa	Known RBP	4.09	□□□□□ -1.76
KRI1	YNL308C	CDC11	P32458	415 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	PET112	P33893	541 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	PIM1	P36775	1133 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	RFC1	P38630	861 aa	Known RBP	4.09	□□□□□ -1.76
KRI1	YNL308C	LAM1	P38851	1228 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	PIC2	P40035	300 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	IOC3	P43596	787 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	MPP10	P47083	593 aa	Known RBP	4.09	□□□□□ -1.76
KRI1	YNL308C	PRP31	P49704	494 aa	Predicted RBP	4.09	□□□□□ -1.76
KRI1	YNL308C	YGL081W	P53156	320 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	GIS4	Q04233	774 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	YOR131C	Q12486	218 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	RAD50	P12753	1312 aa		4.09	□□□□□ -1.76
KRI1	YNL308C	MLP1	Q02455	1875 aa	Known RBP	4.08	□□□□□ -1.76
KRI1	YNL308C	CDC25	P04821	1589 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	TY4B-P	A0A0B7P3V8	1104 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	PGM2	P37012	569 aa	Known RBP	4.08	□□□□□ -1.76
KRI1	YNL308C	ALG14	P38242	237 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	NDC80	P40460	691 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	MTR4	P47047	1073 aa	Known RBP	4.08	□□□□□ -1.76
KRI1	YNL308C	YJR142W	P47173	342 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	PEX13	P80667	386 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	RIP-Chip
KRI1	YNL308C	HAS1	Q03532	505 aa	Known RBP	4.08	□□□□□ -1.76
KRI1	YNL308C	GIN4	Q12263	1142 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	VPS5	Q92331	675 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	DOP1	Q03921	1698 aa		4.08	□□□□□ -1.76
KRI1	YNL308C	SSB1	P11484	613 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	RME1	P32338	300 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	YME2	P32843	850 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	RFC5	P38251	354 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	PEX28	P38848	579 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	SHU2	P38957	223 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
KRI1	YNL308C	SAP1	P39955	897 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	GIP2	P40036	548 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	SSB2	P40150	613 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	RIO2	P40160	425 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	TED1	P40533	473 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	HUL5	P53119	910 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	TIM11	P81449	96 aa	Predicted RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	ARR1	Q06596	294 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	CFT2	Q12102	859 aa	Predicted RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	SSF2	Q12153	453 aa	Predicted RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	RPO21	P04050	1733 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	HTS1	P07263	546 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	MPE1	P35728	441 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	YMR124W	P39523	943 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	BDH2	P39713	417 aa		4.07	□□□□□ -1.76
KRI1	YNL308C	NOG1	Q02892	647 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	CDC53	Q12018	815 aa	Known RBP	4.07	□□□□□ -1.76
KRI1	YNL308C	YKL077W	P36081	392 aa		4.06	□□□□□ -1.76
KRI1	YNL308C	PAN5	P38787	379 aa		4.06	□□□□□ -1.76
KRI1	YNL308C	BEM4	P39011	633 aa		4.06	□□□□□ -1.76
KRI1	YNL308C	YIL092W	P40497	633 aa		4.06	□□□□□ -1.76
KRI1	YNL308C	SEC26	P41810	973 aa	Known RBP	4.06	□□□□□ -1.76
KRI1	YNL308C	CTK3	P46963	296 aa	Predicted RBP	4.06	□□□□□ -1.76
KRI1	YNL308C	SPO19	Q03029	223 aa		4.06	□□□□□ -1.76
KRI1	YNL308C	UTP14	Q04500	899 aa	Known RBP	4.06	□□□□□ -1.76
KRI1	YNL308C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
KRI1	YNL308C	RTC1	Q08281	1341 aa		4.06	□□□□□ -1.76
KRI1	YNL308C	DAL5	P15365	543 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	MRC1	P25588	1096 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	DID4	P36108	232 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	EXO5	P38289	585 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	RGD1	P38339	666 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	BUD6	P41697	788 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	XKS1	P42826	600 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	UTP22	P53254	1237 aa	Predicted RBP	4.05	□□□□□ -1.76
KRI1	YNL308C	SPO71	Q03868	1245 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	YGR161W-C	Q3E744	92 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	TY1B-BR	Q12193	1756 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	TY1B-GR3	Q12316	1755 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	TY1B-OR	Q92393	1755 aa		4.05	□□□□□ -1.76
KRI1	YNL308C	GCR1	P07261	785 aa		4.04	□□□□□ -1.76
KRI1	YNL308C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.04	□□□□□ -1.76
KRI1	YNL308C	TY1A-DR6	P0CX70	440 aa		4.04	□□□□□ -1.76
KRI1	YNL308C	TY1A-ER1	P0CX71	440 aa		4.04	□□□□□ -1.76
KRI1	YNL308C	TY1A-LR2	P0CX72	440 aa		4.04	□□□□□ -1.76
KRI1	YNL308C	TY1A-PL	P0CX73	440 aa		4.04	□□□□□ -1.76
KRI1	YNL308C	TY1A-JR1	P0CX74	440 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms